Items where Subject is "MARUM GB - Geosphere-Biosphere Interactions"

Group by: Creators | Item Type | Volume
Jump to: Part 2 | Part 1 | 98 | 97 | 96 | 95 | 93 | 91 | 90 | 9 | 89 | 88 | 870 | 87 | 86 | 85 | 84 | 83 | 82 | 81 | 806 | 802 | 80 | 8 | 8 | 79A | 79 | 78 | 77 | 76 | 758 | 75 | 74 | 73 | 72 | 71 | 70 | 7 | 69 | 68 | 67 | 66 | 65 | 64 | 63 | 62 | 611 | 61 | 601 | 60 | 6 | 595 | 59 | 58 | 579 | 570 | 57 | 56 | 558 | 55 | 548 | 541 | 54 | 539 | 53 | 526 | 52 | 51 | 504 | 50 | 5 | 496 | 493 | 491 | 49 | 487 | 483 | 48 | 476 | 475 | 470 | 47 | 46 | 457 | 454 | 453 | 45 | 445 | 443 | 44 | 438 | 433 | 43 | 429 | 428 | 426 | 421 | 420 | 42 | 415 | 41 | 408 | 407 | 404 | 403 | 40 | 4 | 399 | 390 | 39 | 385 | 38 | 373 | 370 | 37 | 369-37 | 369 | 367 | 362 | 361 | 36 | 357 | 354 | 352 | 350 | 35 | 349 | 348 | 347 | 344 | 343 | 34-35 | 34 | 339 | 333-33 | 33 | 326 | 324 | 323 | 320 | 32 | 319-32 | 319 | 317 | 314 | 312 | 311 | 31 | 309 | 307 | 306 | 304 | 302 | 300 | 30 | 3 | 299 | 297 | 295 | 294 | 293 | 292 | 290 | 29 | 288 | 287 | 285 | 284 | 283 | 282 | 280 | 28 | 278 | 277 | 276 | 275 | 274 | 273 | 272 | 271 | 27 | 269 | 268 | 266 | 265 | 262 | 261 | 260 | 26 | 257 | 255 | 254 | 253 | 252 | 25 | 249 | 248 | 247 | 245 | 244 | 243 | 242 | 241 | 24 | 239 | 237 | 236 | 234 | 232 | 231 | 23 | 227 | 226 | 225 | 224 | 223 | 222 | 22 | 217 | 216 | 214 | 213 | 212 | 211 | 21 | 209 | 207 | 205 | 2046 | 204 | 203 | 2016 | 2012 | 201 | 200 | 20 | 2 | 199 | 198 | 196 | 191 | 190 | 19 | 189 | 188 | 187 | 1863 | 186 | 185 | 184 | 183 | 182 | 180 | 18 | 178 | 177 | 176 | 175 | 174 | 173 | 171 | 170 | 17 | 166 | 164 | 162 | 160 | 16 | 159 | 158 | 157 | 156 | 155 | 151 | 150 | 15 | 145 | 142 | 141 | 140 | 14 | 139 | 138 | 137 | 133 | 132 | 13 | 129 | 128 | 127 | 126 | 125 | 124 | 122 | 121 | 120 | 12 | 119 | 118 | 117 | 116 | 115 | 113 | 112 | 111 | 110 | 11 | 109 | 108 | 107 | 106 | 105 | 104 | 103 | 102 | 101 | 10 | 1 | 06
Number of items at this level: 1287.

Part 2

Schulz-Vogt, HN (2011) Beggiatoa. In: Reitner, J and Thiel, V (eds.) Encyclopedia of Geobiology (Encyclopedia of Earth Sciences Series). Springer, 111-112. ISBN 1402092113 doi:10.1007/978-1-4020-9212-1_22

Part 1

Schulz-Vogt, HN (2011) Thiomargarita. In: Reitner, J and Thiel, V (eds.) Encyclopedia of Geobiology (Encyclopedia of Earth Sciences Series). Springer, 877. ISBN 978-1-4020-9211-4 doi:10.1007/978-1-4020-9212-1_205

Schulz-Vogt, HN (2011) Thiotrophic bacteria. In: Reitner, J and Thiel, V (eds.) Encyclopedia of Geobiology (Encyclopedia of Earth Sciences Series). Springer, 877-880. ISBN 978-1-4020-9211-4 doi:10.1007/978-1-4020-9212-1_206

98

Bahr, A, Pape, T, Bohrmann, G, Mazzini, A, Haeckel, M, Reitz, A and Ivanov, M (2009) Authigenic carbonate precipitates from the NE Black Sea: a mineralogical, geochemical, and lipid biomarker study. International Journal of Earth Sciences, 98. 677-695. doi:10.1007/s00531-007-0264-1 PANGAEA Supplementary Data

Fischer, C, Arvidson, RS and Lüttge, A (2012) How predictable are dissolution rates of crystalline material? Geochimica et Cosmochimica Acta, 98. 177-185. doi:10.1016/j.gca.2012.09.011 PANGAEA Supplementary Data

Fischer, G, Karakas, G, Blaas, M, Ratmeyer, V, Nowald, N, Schlitzer, R, Helmke, P, Davenport, R, Donner, B, Neuer, S and Wefer, G (2009) Mineral ballast and particle settling rates in the coastal upwelling system off NW Africa and the South Atlantic. International Journal of Earth Sciences, 98(2). 281-298. doi:10.1007/s00531-007-0234-7 PANGAEA Supplementary Data

Vulcano, F, Hahn, CJ, Roerdink, D, Dahle, H, Reeves, EP, Wegener, G, Steen, IH and Stokke, R (2022) Phylogenetic and functional diverse ANME-1 thrive in Arctic hydrothermal vents. FEMS Microbiology Ecology, 98(11). doi:10.1093/femsec/fiac117

97

Rissanen, AJ, Saarela, T, Jäntti, H, Buck, M, Peura, S, Aalto, SL, Ojala, A, Pumpanen, J, Tiirola, M, Elvert, M and Nykänen, H (2021) Vertical stratification patterns of methanotrophs and their genetic controllers in water columns of oxygen-stratified boreal lakes. FEMS Microbiology Ecology, 97(2). doi:10.1093/femsec/fiaa252

Rossel, PE, Bienhold, C, Boetius, A and Dittmar, T (2016) Dissolved organic matter in pore water of Arctic Ocean sediments: Environmental influence on molecular composition. Organic Geochemistry, 97. 41-52. doi:10.1016/j.orggeochem.2016.04.003 PANGAEA Supplementary Data

96

Unger, D, Ittekkot, V, Tiemann, J and Schäfer, P (2005) Biogeochemistry of particulate organic matter from the Bay of Bengal as discernible from hydrolyzable neutral carbohydrates and amino acids. Marine Chemistry, 96(1-2). 155-184. doi:10.1016/j.marchem.2004.12.005

95

Aepfler, RF, Bühring, SI and Elvert, M (2019) Substrate characteristic bacterial fatty acid production based on amino acid assimilation and transformation in marine sediments. FEMS Microbiology Ecology, 95(10). doi:10.1093/femsec/fiz131

Kellermann, MY, Yoshinaga, MY, Wegener, G, Krukenberg, V and Hinrichs, KU (2016) Tracing the production and fate of individual archaeal intact polar lipids using stable isotope probing. Organic Geochemistry, 95. 13-20. doi:10.1016/j.orggeochem.2016.02.004

Koschinsky, A, Kausch, M and Borowski, C (2014) Metal concentrations in the tissues of the hydrothermal vent mussel Bathymodiolus: Reflection of different metal sources. Marine Environmental Research, 95. 62-73. doi:10.1016/j.marenvres.2013.12.012

93

Han, X, Suess, E, Sahling, H and Wallmann, K (2004) Fluid venting activity on the Costa Rica margin: new results from authigenic carbonates. International Journal of Earth Sciences, 93(4). 596-611. doi:10.1007/s00531-004-0402-y

91

Fischer, C, Kurganskaya, I and Lüttge, A (2018) Inherited control of crystal surface reactivity. Applied Geochemistry, 91. 140-148. doi:10.1016/j.apgeochem.2018.02.003

Greinert, J, Bohrmann, G and Elvert, M (2002) Stromatolitic fabric of authigenic carbonate crusts. Results of anaerobic methane oxidation at cold seeps in 4850m water depth. International Journal of Earth Sciences, 91. 698-711. doi:10.1007/s00531-001-0244-9 PANGAEA Supplementary Data

Hayman, NW, Bach, W, Blackman, D, Christeson, GL, Edwards, KJ, Haymon, R, Ildefonso, B, Schulte, M, Tagle, D and White, S (2010) Future scientific drilling of oceanic crust. Eos, Transactions American Geophysical Union, 91(15). 133-134. doi:10.1029/2010EO150001

Mewes, K, Mogollón, JM, Picard, A, Rühlemann, C, Kuhn, T, Nöthen, K and Kasten, S (2014) Impact of depositional and biogeochemical processes on small scale variations in nodule abundance in the Clarion‐Clipperton Fracture Zone. Deep Sea Research Part I: Oceanographic Research Papers, 91. 125-141. doi:10.1016/j.dsr.2014.06.001 PANGAEA Supplementary Data

90

Buttigieg, PL and Ramette, A (2014) A guide to statistical analysis in microbial ecology: a community-focused, living review of multivariate data analyses. FEMS Microbiology Ecology, 90(3). 543-550. doi:10.1111/1574-6941.12437

Häusler, S, Weber, M, Siebert, C, Holtappels, M, Noriega-Ortega, BE, de Beer, D and Ionescu, D (2014) Sulfate reduction and sulfide oxidation in extremely steep salinity gradients formed by freshwater springs emerging into the Dead Sea. FEMS Microbiology Ecology, 90(3). 956-969. doi:10.1111/1574-6941.12449

Winkel, M, Pjevac, P, Kleiner, M, Littmann, S, Meyerdierks, A, Amann, R and Mußmann, M (2014) Identification and activity of acetate-assimilating bacteria in diffuse fluids venting from two deep-sea hydrothermal systems. FEMS Microbiology Ecology, 90(3). 731-746. doi:10.1111/1574-6941.12429

9

Aromokeye, DA, Richter-Heitmann, T, Oni, OE, Kulkarni, A, Yin, X, Kasten, S and Friedrich, MW (2018) Temperature controls crystalline iron oxide utilization by microbial communities in methanic ferruginous marine sediment incubations. Frontiers in Microbiology, 9. doi:10.3389/fmicb.2018.02574

Bachmann, J, Heimbach, T, Hassenrück, C, Kopprio, GA, Iversen, MH, Grossart, HP and Gärdes, A (2018) Environmental drivers of free-living vs. particle-attached bacterial community composition in the Mauritania Upwelling System. Frontiers in Microbiology, 9. doi:10.3389/fmicb.2018.02836 PANGAEA Supplementary Data

Beulig, F, Heuer, VB, Akob, DM, Viehweger, B, Elvert, M, Herrmann, M, Hinrichs, KU and Küsel, K (2015) Carbon flow from volcanic CO2 into soil microbial communities of a wetland mofette. The ISME Journal, 9(3). 746-759. doi:10.1038/ismej.2014.148

Bühring, S, Sievert, SM, Jonkers, HM, Elshahed, MS, Krumholz, LR and Hinrichs, KU (2011) Insights into chemotaxonomic composition and carbon cycling of phototrophic communities in an artesian sulfur-rich spring (Zodletone, Oklahoma, USA), a possible analog for ancient microbial mat systems. Geobiology, 9(2). 166-179. doi:10.1111/j.1472-4669.2010.00268.x

Callbeck, CM, Lavik, G, Ferdelman, TG, Fuchs, B, Gruber-Vodicka, HR, Hach, PF, Littmann, S, Schoffelen, NJ, Kalvelage, T, Thomsen, S, Schunck, H, Löscher, CR, Schmitz, RA and Kuypers, MMM (2018) Oxygen minimum zone cryptic sulfur cycling sustained by offshore transport of key sulfur oxidizing bacteria. Nature Communications, 9(1). doi:10.1038/s41467-018-04041-x PANGAEA Supplementary Data

Dijkstra, N, Kraal, P, Kuypers, MMM, Schnetger, B and Slomp, CP (2014) Are iron-phosphate minerals a sink for phosphorus in anoxic Black Sea sediments? PLoS ONE, 9(7). e101139. doi:10.1371/journal.pone.0101139

Duperron, S, Guezi, H, Gaudron, SM, Pop Ristova, P, Wenzhöfer, F and Boetius, A (2011) Relative abundance of methane- and sulphur-oxidising symbionts in the gills of a cold seep mussel and link to their potential energy sources. Geobiology, 9(6). 481-491. doi:10.1111/j.1472-4669.2011.00300.x

El Albani, A, Bengtson, S, Canfield, DE, Riboulleau, A, Rollion Bard, C, Macchiarelli, R, Ngombi Pemba, L, Hammarlund, E, Meunier, A, Moubiya Mouele, I, Benzerara, K, Bernard, S, Boulvais, P, Chaussidon, M, Cesari, C, Fontaine, C, Chi-Fru, E, Garcia Ruiz, JM, Gauthier-Lafaye, F, Mazurier, A, Pierson-Wickmann, AC, Rouxel, O, Trentesaux, A, Vecoli, M, Versteegh, GJM, White, L, Whitehouse, M and Bekker, A (2014) The 2.1 Ga Old Francevillian Biota: Biogenicity, Taphonomy and Biodiversity. PLoS ONE, 9(6). e99438. doi:10.1371/journal.pone.0099438

Fagervold, SK, Romano, C, Kalenitchenko, D, Borowski, C, Nunes-Jorge, A, Martin, D and Galand, PE (2014) Microbial communities in sunken wood are structured by wood-boring bivalves and location in a submarine canyon. PLoS ONE, 9(5). e96248. doi:10.1371/journal.pone.0096248

Fernández-Méndez, M, Wenzhöfer, F, Peeken, I, Sørensen, HL, Glud, RN and Boetius, A (2014) Composition, buoyancy regulation and fate of ice algal aggregates in the Central Arctic Ocean. PLoS ONE, 9(9). e107452. doi:10.1371/journal.pone.0107452 PANGAEA Supplementary Data

Fischer, D, Sahling, H, Nöthen, K, Bohrmann, G, Zabel, M and Kasten, S (2012) Interaction between hydrocarbon seepage, chemosynthetic communities, and bottom water redox at cold seeps of the Makran accretionary prism: insights from habitat-specific pore water sampling and modeling. Biogeosciences, 9(6). 2012-2031. doi:10.5194/bg-9-2013-2012 PANGAEA Supplementary Data

Gillard, B, Harbour, RP, Nowald, N, Thomsen, L and Iversen, MH (2022) Vertical distribution of particulate matter in the Clarion Clipperton Zone (German Sector) — potential impacts from deep-sea mining discharge in the water column. Frontiers in Marine Science, 9. doi:10.3389/fmars.2022.820947

Goldhammer, T, Max, T, Brunner, B, Einsiedl, F and Zabel, M (2011) Marine sediment pore-water profiles of phosphate d18O using a refined micro-extraction. Limnology and Oceanography-Methods, 9. 110-120. doi:10.4319/lom.2011.9.110 PANGAEA Supplementary Data

Grünke, S, Felden, J, Lichtschlag, A, Girnth, AC, de Beer, D, Wenzhöfer, F and Boetius, A (2011) Niche differentiation among mat-forming, sulfide-oxidizing bacteria at cold seeps of the Nile Deep Sea Fan (Eastern Mediterranean Sea). Geobiology, 9(4). 330-348. doi:10.1111/j.1472-4669.2011.00281.x PANGAEA Supplementary Data

Grünke, S, Lichtschlag, A, de Beer, D, Felden, J, Salman, V, Ramette, A, Schulz-Vogt, HN and Boetius, A (2012) Mats of psychrophilic thiotrophic bacteria associated with cold seeps of the Barents Sea. Biogeosciences, 9(8). 2947-2960. doi:10.5194/bg-9-2947-2012 PANGAEA Supplementary Data

Holtappels, M, Kuypers, MMM, Schlüter, M and Brüchert, V (2011) Measurement and interpretation of solute concentration gradients in the benthic boundary layer. Limnology and Oceanography-Methods, 9. 1-13. doi:10.4319/lom.2011.9.1

Holtappels, M and Lorke, A (2011) Estimating turbulent diffusion in a benthic boundary layer. Limnology and Oceanography-Methods, 9. 29-41. doi:10.4319/lom.2011.9.29

Holtappels, M, Tiano, L, Kalvelage, T, Lavik, G, Revsbech, NP and Kuypers, MMM (2014) Aquatic respiration rate measurements at low oxygen concentrations. PLoS ONE, 9(2). e89369. doi:10.1371/journal.pone.0089369

Höfken, AF, von Dobeneck, T, Kuhn, T and Kasten, S (2021) Impact of upward oxygen diffusion from the oceanic crust on the magnetostratigraphy and iron biomineralization of East Pacific Ridge-flank sediments. Frontiers in Earth Science, 9. doi:10.3389/feart.2021.689931

Imachi, H, Tasumi, E, Takaki, Y, Hoshino, T, Schubotz, F, Gan, S, Tu, TH, Saito, Y, Yamanaka, Y, Ijiri, A, Matsui, Y, Miyazaki, M, Morono, Y, Takai, K, Hinrichs, KU and Inagaki, F (2019) Cultivable microbial community in 2-km-deep, 20-million-year-old subseafloor coalbeds through ~1000 days anaerobic bioreactor cultivation. Scientific Reports, 9(1). doi:10.1038/s41598-019-38754-w

Karsenti, E, Acinas, SG, Bork, P, Bowler, C, de Vargas, C, Raes, J, Sullivan, M, Arendt, D, Benzoni, F, Claverie, JM, Follows, M, Gorsky, G, Hingamp, P, Iudicone, D, Jaillon, O, Kandels-Lewis, S, Krzic, U, Not, F, Ogata, H, Pesant, S, Reynaud, E, Sardet, C, Sieracki, M, Speich, S, Velayoudon, D, Weissenbach, J, Wincker, P and Oceans Consortium (2011) A holistic approach to marine ecosystems biology. PLoS Biology, 9(19). e1001177. doi:10.1371/journal.pbio.1001177

Klassen, L, Reintjes, G, Tingley, JP, Jones, DR, Hehemann, JH, Smith, AD, Schwinghamer, TD, Arnosti, C, Jin, L, Alexander, TW, Amundsen, C, Thomas, D, Amann, R, McAllister, TA and Abbott, DW (2021) Quantifying fluorescent glycan uptake to elucidate strain-level variability in foraging behaviors of rumen bacteria. Microbiome, 9(1). doi:10.1186/s40168-020-00975-x

Klose, L, Keith, M, Hafermaas, D, Kleint, C, Bach, W, Diehl, A, Wilckens, FK, Peters, C, Strauss, H, Klemd, R, van Geldern, R, Haase, KM and Koschinsky, A (2021) Trace element and isotope systematics in vent fluids and sulphides from Maka Volcano, North Eastern Lau Spreading Centre: insights into three-component fluid mixing. Frontiers in Earth Science, 9. doi:10.3389/feart.2021.776925

Krupke, A, Mohr, W, LaRoche, J, Fuchs, BM, Amann, RI and Kuypers, MMM (2015) The effect of nutrients on carbon and nitrogen fixation by the UCYN-A–haptophyte symbiosis. The ISME Journal, 9(7). 1635-1647. doi:10.1038/ismej.2014.253

Löscher, CR, Kock, A, Könneke, M, LaRoche, J, Bange, HW and Schmitz, RA (2012) Production of oceanic nitrous oxide by ammonia-oxidizing archaea. Biogeosciences, 9(7). 2419-2429. doi:10.5194/bg-9-2419-2012

Lüttge, A, Arvidson, RS and Fischer, C (2013) A stochastic treatment of crystal dissolution kinetics. Elements, 9(3). 183-188. doi:10.2113/gselements.9.3.183

Marchant, HK, Lavik, G, Holtappels, M and Kuypers, MMM (2014) The fate of nitrate in intertidal permeable sediments. PLoS ONE, 9(8). e104517. doi:10.1371/journal.pone.0104517

Milucka, J, Kirf, M, Lu, L, Krupke, A, Lam, P, Littmann, S, Kuypers, MMM and Schubert, CJ (2015) Methane oxidation coupled to oxygenic photosynthesis in anoxic waters. The ISME Journal, 9(9). 1991-2002. doi:10.1038/ismej.2015.12

Nauhaus, K, Albrecht, M, Elvert, M, Boetius, A and Widdel, HU (2007) In vitro cell growth of marine archaeal-bacterial consortia by anaerobic oxidation of methane with sulfate. Environmental Microbiology, 9(1). 187-196. doi:10.1111/j.1462-2920.2006.01127.x

Nikolovska, A, Sahling, H and Bohrmann, G (2008) Hydroacoustic methodology for detection, localization, and quantification of gas bubbles rising from the seafloor at gas seeps from the eastern Black Sea. Geochemistry Geophysics Geosystems, 9. Q10010. doi:10.1029/2008GC002118

Pjevac, P, Meier, DV, Markert, S, Hentschker, C, Schweder, T, Becher, D, Gruber-Vodicka, HR, Richter, M, Bach, W, Amann, R and Meyerdierks, A (2018) Metaproteogenomic profiling of microbial communities colonizing actively venting hydrothermal chimneys. Frontiers in Microbiology, 9. doi:10.3389/fmicb.2018.00680

Pop Ristova, P, Wenzhöfer, F, Ramette, A, Felden, J and Boetius, A (2015) Spatial scales of bacterial community diversity at cold seeps (Eastern Mediterranean Sea). The ISME Journal, 9(6). 1306-1318. doi:10.1038/ismej.2014.217 PANGAEA Supplementary Data

Pop Ristova, P, Wenzhöfer, F, Ramette, A, Zabel, M, Fischer, D, Kasten, S and Boetius, A (2012) Bacterial diversity and biogeochemistry of different chemosynthetic habitats of the REGAB cold seep (West African margin, 3160 m water depth). Biogeosciences, 9. 5031-5048. doi:10.5194/bg-9-5031-2012 PANGAEA Supplementary Data

Ranero, CR, Grevemeyer, I, Sahling, H, Barckhausen, U, Hensen, C, Wallmann, W, Weinrebe, WR, Vannucchi, P, von Huene, R and McIntosh, KD (2008) Hydrogeological system of erosional convergent margins and its influence on tectonics and interplate seismogenesis. Geochemistry Geophysics Geosystems, 9(3). Q03S04. doi:10.1029/2007GC001679

Rapp, JZ, Fernández-Méndez, M, Bienhold, C and Boetius, A (2018) Effects of ice-algal aggregate export on the connectivity of bacterial communities in the central Arctic Ocean. Frontiers in Microbiology, 9. doi:10.3389/fmicb.2018.01035 PANGAEA Supplementary Data

Riedel, M, Scherwath, M, Römer, M, Veloso, M, Heesemann, M and Spence, GD (2018) Distributed natural gas venting offshore along the Cascadia margin. Nature Communications, 9(1). doi:10.1038/s41467-018-05736-x

Sahling, H, Masson, DG, Ranero, C, Hühnerbach, V, Weinrebe, WR, Klaucke, I, Bürk, D, Brückmann, W and Suess, E (2008) Fluid seepage at the continental margin offshore Costa Rica and southern Nicaragua. Geochemistry Geophysics Geosystems, 9. Q05S05. doi:10.1029/2008GC001978

Xing, P, Hahnke, RL, Unfried, F, Markert, S, Huang, S, Barbeyron, T, Harder, J, Becher, D, Schweder, T, Glöckner, FO, Amann, RI and Teeling, H (2015) Niches of two polysaccharide-degrading Polaribacter isolates from the North Sea during a spring diatom bloom. The ISME Journal, 9(6). 1410-1422. doi:10.1038/ismej.2014.225

Zindler, C, Peeken, I, Marandino, CA and Bange, HW (2012) Environmental control on the variability of DMS and DMSP in the Mauritanian upwelling region. Biogeosciences, 9. 1041-1051. doi:10.5194/bg-9-1041-2012

Zonneveld, KAF, Grotheer, H and Versteegh, GJM (2022) Dinoflagellate cysts production, excystment and transport in the upwelling off Cape Blanc (NW Africa). Frontiers in Marine Science, 9. doi:10.3389/fmars.2022.915755

de Deckker, P, Abed, RMM, de Beer, D, Hinrichs, KU, O'Loingsigh, T, Schefuß, E, Stuut, JB, Tapper, NJ and van der Kaars, S (2008) Geochemical and microbiological fingerprinting of airborne dust that fell in Canberra, Australia, in October 2002. Geochemistry Geophysics Geosystems, 9. Q12Q10. doi:10.1029/2008GC002091

89

Liu, XL, Lipp, JS, Simpson, JH, Lin, YS, Summons, RE and Hinrichs, KU (2012) Mono- and dihydroxyl glycerol dibiphytanyl glycerol tetraethers in marine sediments: Identification of both core and intact polar lipid forms. Geochimica et Cosmochimica Acta, 89. 102-115. doi:10.1016/j.gca.2012.04.053 PANGAEA Supplementary Data

Reuter, H, Gensel, J, Elvert, M and Zak, D (2017) Direct analysis of lignin phenols in freshwater dissolved organic matter. Analytical Chemistry, 89(24). 13449-13457. doi:10.1021/acs.analchem.7b03729

88

Birgel, D, Stein, R and Hefter, J (2004) Aliphatic lipids in recent sediments of the Fram Strait/Yermak Plateau (Arctic Ocean): composition, sources and transport processes. Marine Chemistry, 88(3-4). 127-160. doi:10.1016/j.marchem.2004.03.006 PANGAEA Supplementary Data

Coffinet, S, Mühlena, L, Lipp, JS, Weil, M, Neubauer, C, Urich, T and Hinrichs, KU (2022) Evidence for enzymatic backbone methylation of the main membrane lipids in the archaeon Methanomassiliicoccus luminyensis. Applied and Environmental Microbiology, 88(4). e02154-21. doi:10.1128/aem.02154-21

Henkel, S, Mogollón, JM, Nöthen, K, Franke, C, Bogus, K, Robin, E, Bahr, A, Blumenberg, M, Pape, T, Seifert, R, März, C, de Lange, GJ and Kasten, S (2012) Diagenetic barium cycling in Black Sea sediments - A case study for anoxic marine environments. Geochimica et Cosmochimica Acta, 88. 88-105. doi:10.1016/j.gca.2012.04.021 PANGAEA Supplementary Data

Tóth, Z, Spieß, V and Jensen, JB (2014) Seismo-acoustic signatures of shallow free gas in the Bornholm Basin, Baltic Sea. Continental Shelf Research, 88. 228-239. doi:10.1016/j.csr.2014.08.007

870

Sampaio, Í, Carreiro-Silva, M, Freiwald, A, Menezes, G and Grasshoff, M (2019) Natural history collections as a basis for sound biodiversity assessments: Plexauridae (Octocorallia, Holaxonia) of the Naturalis CANCAP and Tyro Mauritania II expeditions. ZooKeys, 870. 1-32. doi:10.3897/zookeys.870.35285

87

Bach, W, Edwards, KJ, Hayes, JM, Sievert, S, Huber, JA and Sogin, ML (2006) Energy in the dark: fuel for lIfe in the deep ocean and beyond. EOS, Transactions of the American Geophysical Union, 87(7). 73-78. doi:10.1029/2006EO070002

Riedel, M, Collett, T, Malone, M, Akiba, F, Blanc-Valleron, MM, Ellis, M, Guerin, G, Hashimoto, Y, Heuer, VB, Higashi, Y, Holland, M, Jackson, P, Kaneko, M, Kastner, M, Kim, JH, Kitajima, H, Long, P, Malinverno, A, Myers, G, Palekar, L, Pohlman, J, Schultheiss, P, Teichert, B, Torres, M, Tréhu, AM, Wang, J, Wortmann, U and Yoshioka, H (2006) Gas hydrate transect across northern Cascadia margin. Eos, Transactions American Geophysical Union, 87(33). 325. doi:10.1029/2006EO330002

86

Coban, H, Miltner, A, Elling, FJ, Hinrichs, KU and Kästner, M (2015) The contribution of biogas residues to soil organic matter formation and CO2 emissions in an arable soil. Soil Biology and Biochemistry, 86. 108-115. doi:10.1016/j.soilbio.2015.03.023

Hovland, M, MacDonald, IR, Rueslatten, H, Johnsen, HK, Naehr, T and Bohrmann, G (2005) Chapopote asphalt volcano may have been generated by supercritical water. EOS, Transactions , 86(42). 397, 402. doi:10.1029/2005EO420002

Klaucke, I, Sahling, H, Bürk, D, Weinrebe, WR and Bohrmann, G (2005) Mapping deep-water gas emissions with high-resolution sidscan sonar. Eos, Transactions American Geophysical Union, 86(38). 341-346. doi:10.1029/2005EO380002

85

Bühring, SI, Kamp, A, Wörmer, L, Ho, S and Hinrichs, KU (2014) Functional structure of laminated microbial sediments from a supratidal sandy beach of the German Wadden Sea (St. Peter-Ording). Journal of Sea Research, 85. 463-473. doi:10.1016/j.seares.2013.08.001 PANGAEA Supplementary Data

Khachikyan, A, Milucka, J, Littmann, S, Ahmerkamp, S, Meador, T, Könneke, M, Burg, T and Kuypers, MMM (2019) Direct cell mass measurements expand the role of small microorganisms in nature. Applied and Environmental Microbiology, 85(14). doi:10.1128/AEM.00493-19

84

Becker, KW, Elling, FJ, Schröder, JM, Lipp, JS, Goldhammer, T, Zabel, M, Elvert, M, Overmann, J and Hinrichs, KU (2018) Isoprenoid quinones resolve the stratification of redox processes in a biogeochemical continuum from the photic zone to deep anoxic sediments of the Black Sea. Applied and Environmental Microbiology, 84(10). e02736-17. doi:10.1128/AEM.02736-17 PANGAEA Supplementary Data

Fortney, NW, He, S, Kulkarni, A, Friedrich, MW, Holz, C, Boyd, ES and Roden, EE (2018) Stable isotope probing for microbial iron reduction in Chocolate Pots hot spring, Yellowstone National Park. Applied and Environmental Microbiology, 84(11). doi:10.1128/AEM.02894-17

Kraft, A, Engelen, B, Goldhammer, T, Lin, YS, Cypionka, H and Könneke, M (2013) Desulfofrigus sp. prevails in sulfate-reducing dilution cultures from sediments of the Benguela upwelling area|. FEMS Microbiology Ecology, 84(1). 86-97. doi:10.1111/1574-6941.12039

Krylova, EM, Sahling, H and Borowski, C (2018) Resolving the status of the families Vesicomyidae and Kelliellidae (Bivalvia: Venerida), with notes on their ecology. Journal of Molluscan Studies, 84(1). 69-91. doi:10.1093/mollus/eyx050

Rampen, SW, Willmott, V, Kim, JH, Uliana, E, Mollenhauer, G, Schefuß, E, Damste, JSS and Schouten, S (2012) Long chain 1,13- and 1,15-diols as a potential proxy for palaeotemperature reconstruction. Geochimica et Cosmochimica Acta, 84. 204-216. doi:10.1016/j.gca.2012.01.024 PANGAEA Supplementary Data

83

Becker, S, Scheffel, A, Polz, MF and Hehemann, JH (2017) Accurate quantification of Laminarin in Marine Organic Matter with Enzymes from Marine Microbes. Applied and Environmental Microbiology, 83(9). e03389-16. doi:10.1128/AEM.03389-16

Fischer, G, Reuter, C, Karakas, G, Nowald, N and Wefer, G (2009) Offshore advection of particles within the Cape Blanc filament, Mauritania: Results from observational and modelling studies. In: Freon, P, Barange, M and Aristegui, J (eds.) Eastern Boundary Upwelling Ecosystems: Integrative and Comparitive Approaches. Special Issue, Progress in Oceanography, 83(1-4). Elsevier Ltd., 322-330. doi:10.1016/j.pocean.2009.07.023 PANGAEA Supplementary Data

Karakas, G, Nowald, N, Schäfer-Neth, C, Iversen, MH, Barkmann, W, Fischer, G, Marchesiello, P and Schlitzer, R (2009) Impact of particle aggregation on fluxes of organic matter. Progress in Oceanography, 83. 331-341. doi:10.1016/j.pocean.2009.07.047

Lechtenfeld, OJ, Koch, BP, Geibert, W, Ludwichowski, KU and Kattner, G (2011) Inorganics in Organics: Quantification of Organic Phosphorus and Sulfur and Trace Element Speciation in Natural Organic Matter Using HPLC-ICPMS. Analytical Chemistry, 83(23). 8968-8974. doi:10.1021/ac201765a

Wenau, S, Spieß, V, Pape, T and Fekete, N (2017) Controlling mechanisms of giant deep water pockmarks in the Lower Congo Basin. Marine and Petroleum Geology, 83. 140-157. doi:10.1016/j.marpetgeo.2017.02.030 PANGAEA Supplementary Data

82

Becker, KW, Elling, FJ, Yoshinaga, MY, Söllinger, A, Urich, T and Hinrichs, KU (2016) Unusual butane- and pentanetriol-based tetraether lipids in Methanomassiliicoccus luminyensis, a representative of the seventh order of methanogens. Applied and Environmental Microbiology, 82(15). 4505-4516. doi:10.1128/AEM.00772-16

Beckmann, B, Hofmann, P and Wagner, T (2005) Linking Coniacian-Santonian (OAE3) black shale deposition to African climate variability: A reference section from the eastern tropical Atlantic at orbital time scales (ODP Site 959, off Ivory Coast and Ghana). In: Harris, NB (ed.) The Deposition of Organic-Carbon-Rich Sediments: Models, Mechanisms, and Consequences. SEPM Special Publication, 125-143.

Bühring, S, Koppelmann, R, Christiansen, B and Weikert, H (2002) Are Rhodophyceae a dietary component for deep-sea holothurians? Journal of the Marine Biological Association of the United Kingdom, 82(2). 347-348. doi:10.1017/S0025315402005556

Schimak, MP, Kleiner, M, Wetzel, S, Liebeke, M, Dubilier, N and Fuchs, BM (2015) MiL-FISH: Multilabeled oligonucleotides for fluorescence in situ hybridization improve visualization of bacterial cells. Applied and Environmental Microbiology, 82(1). 62-70. doi:10.1128/AEM.02776-15

81

Hädrich, A, Heuer, VB, Herrmann, M, Hinrichs, KU and Küsel, K (2012) Origin and fate of acetate in an acidic fen. FEMS Microbiology Ecology, 81(2). 339-354. doi:10.1111/j.1574-6941.2012.01352.x

Korlević, M, Pop Ristova, P, Garić, R, Amann, R and Orlić, S (2014) Bacterial diversity in the South Adriatic Sea during a strong, deep winter convection year. Applied and Environmental Microbiology, 81(5). 1715-1726. doi:10.1128/AEM.03410-14

Otte, J, Mall, A, Schubert, DM, Könneke, M and Berg, IA (2014) Malonic semialdehyde reductase from the archaeon Nitrosopumilus maritimus is involved in the autotrophic 3-hydroxypropionate/4-hydroxybutyrate cycle. Applied and Environmental Microbiology, 81(5). 1700-1707. doi:10.1128/AEM.03390-14

Thiele, S, Fuchs, BM, Amann, R and Iversen, MH (2014) Colonization in the photic zone and subsequent changes during sinking determine bacterial community composition in marine snow. Applied and Environmental Microbiology, 81(4). 1463-1471. doi:10.1128/AEM.02570-14 PANGAEA Supplementary Data

Yilmaz, P, Iversen, MH, Hankeln, W, Kottmann, R, Quast, C and Glöckner, FO (2012) Ecological structuring of bacterial and archaeal taxa in surface ocean waters. FEMS Microbiology Ecology, 81(2). 373-385. doi:10.1111/j.1574-6941.2012.01357.x PANGAEA Supplementary Data

806

Kenigsberg, C, Titelboim, D, Ashckenazi-Polivoda, S, Herut, B, Kucera, M, Zukerman, Y, Hyams-Kaphzan, O, Almogi-Labin, A and Abramovich, S (2022) The combined effects of rising temperature and salinity may halt the future proliferation of symbiont-bearing foraminifera as ecosystem engineers. Science of The Total Environment, 806. 150581. doi:10.1016/j.scitotenv.2021.150581

802

Granse, D, Titschack, J, Ainouche, M, Jensen, K and Koop-Jakobsen, K (2022) Subsurface aeration of tidal wetland soils: Root-system structure and aerenchyma connectivity in Spartina (Poaceae). Science of The Total Environment, 802. 149771. doi:10.1016/j.scitotenv.2021.149771

80

Abed, RMM, Ramette, A, Hübner, V, de Deckker, P and de Beer, D (2012) Microbial diversity of eolian dust sources from saline lake sediments and biological soil crusts in arid Southern Australia. FEMS Microbiology Ecology, 80(2). 294-304. doi:10.1111/j.1574-6941.2011.01289.x PANGAEA Supplementary Data

Allen, KD, Wegener, G and White, RH (2014) Discovery of multiple modified F430 coenzymes in methanogens and anaerobic methanotrophic archaea suggests possible new roles for F430 in nature. Applied and Environmental Microbiology, 80(20). 6403-6412. doi:10.1128/AEM.02202-14

Berg, JS, Schwedt, A, Kreutzmann, AC, Kuypers, MMM and Milucka, J (2014) Polysulfides as intermediates in the oxidation of sulfide to sulfate by Beggiatoa spp. Applied and Environmental Microbiology, 80(2). 629-636. doi:10.1128/AEM.02852-13

Brüchert, V and Arnosti, C (2003) Anaerobic carbon transformation: Experimental studies with flow-through cells. Marine Chemistry, 80(2-3). 171-183. doi:10.1016/S0304-4203(02)00119-6

8

Schöttner, S, Hoffmann, F, Cardenas, P, Rapp, HT, Boetius, A and Ramette, A (2013) Relationships between Host Phylogeny, Host Type and Bacterial Community Diversity in Cold-Water Coral Reef Sponges. PLoS ONE, 8 (2). doi:10.1371/journal.pone.0055505

8

Alain, K, Holler, T, Musat, F, Elvert, M, Treude, T and Krüger, M (2006) Microbiological investigation of methane- and hydrocarbon-discharging mud volcanoes in the Carpathian Mountains, Romania. Environmental Microbiology, 8(4). 574-590. doi:10.1111/j.1462-2920.2005.00922.x

Assié, A, Borowski, C, van der Heijden, K, Raggi, L, Geier, B, Leisch, N, Schimak, MP, Dubilier, N and Petersen, JM (2016) A specific and widespread association between deep-sea Bathymodiolus mussels and a novel family of Epsilonproteobacteria. Environmental Microbiology Reports, 8(5). 805-813. doi:10.1111/1758-2229.12442

Assmy, P, Ehn, JK, Fernández-Méndez, M, Hop, H, Katlein, C, Sundfjord, A, Bluhm, K, Daase, M, Engel, A, Fransson, A, Granskog, MA, Hudson, SR, Kristiansen, S, Nicolaus, M, Peeken, I, Renner, AHH, Spreen, G, Tatarek, A and Wiktor, J (2013) Floating ice-algal aggregates below melting Arctic sea ice. PLoS ONE, 8(10). e76599. doi:10.1371/journal.pone.0076599

Bibi, I, Arvidson, RS, Fischer, C and Lüttge, A (2018) Temporal evolution of calcite surface dissolution kinetics. Minerals, 8(6). 256. doi:10.3390/min8060256

Bienhold, C, Pop Ristova, P, Wenzhöfer, F, Dittmar, T and Boetius, A (2013) How deep-sea wood falls sustain chemosynthetic life. PLoS ONE, 8(1). e53590. doi:10.1371/journal.pone.0053590 PANGAEA Supplementary Data

Blumenberg, M, Krüger, M, Nauhaus, K, Talbot, HM, Oppermann, BI, Seifert, R, Pape, T and Michaelis, W (2006) Biosynthesis of hopanoids by sulphate-reducing bacteria (genus Desulfovibrio). Environmental Microbiology, 8(7). 1220-1227. doi:10.1111/j.1462-2920.2006.01014.x

Caramanna, G, Sievert, SM and Bühring, SI (2021) Submarine shallow-water fluid emissions and their geomicrobiological imprint: a global overview. Frontiers in Marine Science, 8. doi:10.3389/fmars.2021.727199

Ciobanu, MC, Burgaud, G, Dufresne, A, Breuker, A, Rédou, V, Ben Maamar, S, Gaboyer, F, Vandenabeele-Trambouze, O, Lipp, JS, Schippers, A, Vandenkoornhuyse, P, Barbier, G, Jebbar, M, Godfroy, A and Alain, K (2014) Microorganisms persist at record depths in the subseafloor of the Canterbury Basin. The ISME Journal, 8(7). 1370-1380. doi:10.1038/ismej.2013.250

Dumke, I, Purser, A, Marcon, Y, Nornes, SM, Johnsen, G, Ludvigsen, M and Søreide, F (2018) Underwater hyperspectral imaging as an in situ taxonomic tool for deep-sea megafauna. Scientific Reports, 8(1). doi:10.1038/s41598-018-31261-4

Fischer, G, Neuer, S, Ramondenc, S, Müller, TJ, Donner, B, Ruhland, G, Ratmeyer, V, Meinecke, G, Nowald, N, Klann, M and Wefer, G (2020) Long-term changes of particle flux in the Canary Basin between 1991 and 2009 and comparison to sediment trap records off Mauritania. Frontiers in Earth Science, 8. doi:10.3389/feart.2020.00280

Gomez-Saez, GV, Pop Ristova, P, Sievert, SM, Elvert, M, Hinrichs, KU and Bühring, SI (2017) Relative importance of chemoautotrophy for primary production in a light exposed marine Shallow Hydrothermal System. Frontiers in Microbiology, 8. doi:10.3389/fmicb.2017.00702

Hawkes, JA, Rossel, PE, Stubbins, A, Butterfield, D, Connelly, DP, Achterberg, EP, Koschinsky, A, Chavagnac, V, Hansen, CT, Bach, W and Dittmar, T (2015) Efficient removal of recalcitrant deep-ocean dissolved organic matter during hydrothermal circulation. Nature Geoscience, 8(11). 856-860. doi:10.1038/NGEO2543 PANGAEA Supplementary Data

Heeschen, KU, Haeckel, M, Klaucke, I, Ivanov, MK and Bohrmann, G (2011) Quantifying in-situ gas hydrates at active seep sites in the eastern Black Sea using pressure coring technique. Biogeosciences, 8. doi:10.5194/bg-8-3555-2011

Jacob, M, Soltwedel, T, Boetius, A and Ramette, A (2013) Biogeography of deep-sea benthic bacteria at regional scale (LTER HAUSGARTEN, Fram Strait, Arctic). PLoS ONE, 8(9). e72779. doi:10.1371/journal.pone.0072779

Kleindienst, S, Herbst, FA, Stagars, M, von Netzer, F, von Bergen, M, Seifert, J, Peplies, J, Amann, R, Musat, F, Lueders, T and Knittel, K (2014) Diverse sulfate-reducing bacteria of the Desulfosarcina/Desulfococcus clade are the key alkane degraders at marine seeps. The ISME Journal, 8(10). 2029-2044. doi:10.1038/ismej.2014.51

Lam, P, Jensen, MM, Kock, A, Lettmann, K, Plancherel, Y, Lavik, G, Bange, HW and Kuypers, MMM (2011) Origin and fate of the secondary nitrite maximum in the Arabian Sea. Biogeosciences, 8(6). 1565-1577. doi:10.5194/bg-8-1565-2011

Loescher, CR, Großkopf, T, Desai, FD, Gill, D, Schunck, H, Croot, PL, Schlosser, C, Neulinger, SC, Pinnow, N, Lavik, G, Kuypers, MMM, LaRoche, J and Schmitz, RA (2014) Facets of diazotrophy in the oxygen minimum zone waters off Peru. The ISME Journal, 8(11). 2180-2192. doi:10.1038/ismej.2014.71 PANGAEA Supplementary Data

Lohmann, R, Lee, RGM, Abbott, J, Coleman, P and Jones, KC (2006) Verifying emission factors and national POPs emission inventories for the UK using measurements and modelling at several rural locations. Journal of Environmental Monitoring, 8. 29-88. doi:10.1039/b511399g

Mohr, W, Vagner, T, Kuypers, MMM, Ackermann, M and LaRoche, J (2013) Resolution of conflicting signals at the single-cell level in the regulation of cyanobacterial photosynthesis and nitrogen ixation. PLoS ONE, 8(6). e66060. doi:10.1371/journal.pone.0066060

Mollenhauer, G, Inthorn, M, Vogt, T, Zabel, M, Sinninghe Damsté, JS and Eglinton, TI (2007) Aging of marine organic matter during cross-shelf lateral transport in the Benguela upwelling system revealed by compound-specific radiocarbon dating. Geochemistry Geophysics Geosystems, 8. Q09004. doi:10.1029/2007GC001603

Moradi, N, Klawonn, I, Iversen, MH, Wenzhöfer, F, Grossart, HP, Ploug, H, Fischer, G and Khalili, A (2021) A novel measurement-based model for calculating diffusive fluxes across substrate-water interfaces of marine aggregates, sediments and biofilms. Frontiers in Marine Science, 8. doi:10.3389/fmars.2021.689977

Morato, T, Pham, CK, Fauconnet, L, Taranto, GH, Chimienti, G, Cordes, E, Dominguez-Carrió, C, Durán Muñoz, P, Egilsdottir, H, González-Irusta, JM, Grehan, A, Hebbeln, D, Henry, LA, Kazanidis, G, Kenchington, E, Menot, L, Molodtsova, TN, Orejas, C, Ramiro-Sánchez, B, Ramos, M, Roberts, JM, Rodrigues, L, Ross, SW, Rueda, JL, Sacau, M, Stirling, D and Carreiro-Silva, M (2021) North Atlantic basin-scale multi-criteria assessment database to inform effective management and protection of vulnerable marine ecosystems. Frontiers in Marine Science, 8. doi:10.3389/fmars.2021.637078

Neogi, S, Koch, BP, Schmitt-Kopplin, P, Pohl, C, Kattner, G, Yamasaki, S and Lara, R (2011) Biogeochemical controls on the bacterial populations in the eastern Atlantic Ocean. Biogeosciences, 8(12). 3747-3759. doi:10.5194/bg-8-3747-2011

Niemann, H, Linke, P, Knittel, K, MacPherson, E, Boetius, A, Brückmann, W, Lavik, G, Wallmann, K, Schacht, U, Omoregie, E, Hilton, D, Brown, K and Rehder, G (2013) Methane-carbon flow into the benthic food web at cold seeps - a case study from the Costa Rica subduction zone. PLoS ONE, 8(10). e74894. doi:10.1371/journal.pone.0074894

Ploug, H, Terbrüggen, A, Kaufmann, A, Wolf-Gladrow, D and Passow, U (2010) A novel method to measure particle sinking velocity in vitro, and its comparison to three other in vitro methods. Limnology and Oceanography-Methods, 8. 386-393. doi:10.4319/lom.2010.8.386

Pop Ristova, P, Pichler, T, Friedrich, MW and Bühring, SI (2017) Bacterial diversity and biogeochemistry of two marine shallow-water hydrothermal systems off Dominica (Lesser Antilles). Frontiers in Microbiology, 8. doi:10.3389/fmicb.2017.02400 PANGAEA Supplementary Data

Rohlfs, R, Fischer, C, Kurganskaya, I and Lüttge, A (2018) Crystal dissolution kinetics studied by a combination of Monte Carlo and Voronoi methods. Minerals, 8(4). 133. doi:10.3390/min8040133

Romano, S, Bondarev, V, Kölling, M, Dittmar, T and Schulz-Vogt, HN (2017) Phosphate limitation triggers the dissolution of precipitated iron by the marine bacterium Pseudovibrio sp. FO-BEG1. Frontiers in Microbiology, 8. doi:10.3389/fmicb.2017.00364

Ruff, SE, Arnds, J, Knittel, K, Amann, R, Wegener, G, Ramette, A and Boetius, A (2013) Microbial communities of deep-sea methane seeps at Hikurangi continental argin (New Zealand). PLoS ONE, 8(9). e72627. doi:10.1371/journal.pone.0072627

Schunck, H, Lavik, G, Desai, DK, Großkopf, T, Kalvelage, T, Löscher, CR, Paulmier, A, Contreras, S, Siegel, H, Holtappels, M, Rosenstiel, P, Schilhabel, MB, Graco, M, Schmitz, RA, Kuypers, MMM and LaRoche, J (2013) Giant hydrogen sulfide plume in the oxygen minimum zone off Peru supports chemolithoautotrophy. PLoS ONE, 8(8). e68661. doi:10.1371/journal.pone.0068661

Serrano, W, Olaechea, RM, Wink, J and Friedrich, MW (2019) Draft genome sequence of Streptomyces sp. strain RFCAC02, isolated from the gut microflora of the Pacific chub mackerel Scomber japonicus peruanus. Microbiology Resource Announcements, 8(23). doi:10.1128/MRA.00355-19

Sollich, M, Yoshinaga, MY, Häusler, S, Price, RE, Hinrichs, KU and Bühring, SI (2017) Heat stress dictates microbial lipid composition along a thermal gradient in marine sediments. Frontiers in Microbiology, 8. doi:10.3389/fmicb.2017.01550

Taylor, BB, Torrecilla, E, Bernhardt, A, Taylor, MH, Peeken, I, Röttgers, R, Piera, J and Bracher, A (2011) Bio-optical provinces in the eastern Atlantic Ocean and their biogeographical relevance. Biogeosciences, 8. 3609-3629. doi:10.5194/bg-8-3609-2011 PANGAEA Supplementary Data

Thiele, S, Basse, A, Becker, JW, Lipski, A, Iversen, MH and Mollenhauer, G (2019) Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. MicrobiologyOpen, 8(5). e00705. doi:10.1002/mbo3.705

Versteegh, GJM, de Leeuw, JW, Taricco, C and Romero, A (2007) Temperature and productivity influences on UK'37 and their possible relation to solar forcing of the Mediterranean winter. Geochemistry Geophysics Geosystems, 8. Q9005. doi:10.1029/2006GC001543 PANGAEA Supplementary Data

Wang, FP, Zhang, Y, Chen, Y, He, Y, Qi, J, Hinrichs, KU, Zhang, XX, Xiao, X and Boon, N (2014) Methanotrophic archaea possessing diverging methane-oxidizing and electron-transporting pathways. The ISME Journal, 8(5). 1069-1078. doi:10.1038/ismej.2013.212

Xie, Z, Koch, BP, Möller, A, Sturm, R and Ebinghaus, R (2011) Transport and fate of hexachlorocyclohexanes in the oceanic air and surface seawater. Biogeosciences, 8(9). 2621-2633. doi:10.5194/bg-8-2621-2011 PANGAEA Supplementary Data

79A

Zeder, M, Ellrott, A and Amann, R (2011) Automated Sample Area Definition for High-Throughput Microscopy. Cytometry Part A, 79A(4). 306-310. doi:10.1002/cyto.a.21034

79

Gagen, EJ, Huber, H, Meador, TB, Hinrichs, KU and Thomm, M (2013) Novel cultivation-based approach to understanding the miscellaneous crenarchaeotic group (MCG) archaea from sedimentary ecosystems. Applied and Environmental Microbiology, 79(20). 6400-6406. doi:10.1128/aem.02153-13

Mann, AJ, Hahnke, RL, Huang, S, Werner, JP, Xing, P, Barbeyron, T, Huettel, B, Stuber, K, Reinhardt, R, Harder, J, Glockner, FO, Amann, RI and Teeling, H (2013) The genome of the alga-associated marine flavobacterium Formosa agariphila KMM 3901T reveals a broad potential for degradation of algal polysaccharides. Applied and Environmental Microbiology, 79(21). 6813-6822. doi:10.1128/AEM.01937-13

Pavloudi, C, Oulas, A, Vasileiadou, K, Kotoulas, G, De Troch, M, Friedrich, MW and Arvanitidis, C (2017) Diversity and abundance of sulfate-reducing microorganisms in a Mediterranean lagoonal complex (Amvrakikos Gulf, Ionian Sea) derived from dsrB gene. Aquatic Microbial Ecology, 79(3). 209-219. doi:10.3354/ame01829

78

Kupinska, M, Sachs, O, Sauter, EJ and Zonneveld, KAF (2012) Aerobic degradation of organic carbon inferred from dinoflagellate cyst decomposition in Southern Ocean sediments. Quaternary Research, 78(1). 130-138. doi:10.1016/j.yqres.2012.04.001

77

Beutler, M, Heisterkamp, IM, Piltz, B, Stief, P and de Beer, D (2014) Microscopic oxygen imaging based on fluorescein bleaching efficiency measurements. Microscopy Research and Technique, 77(5). 341-347. doi:10.1002/jemt.22350

Birgel, D, Guido, A, Liu, X, Hinrichs, KU, Gier, S and Peckmann, JL (2014) Hypersaline conditions during deposition of the Calcare di Base revealed from archaeal di- and tetraether inventories. Organic Geochemistry, 77. 11-21. doi:10.1016/j.orggeochem.2014.09.002

Lin, YS, Heuer, VB, Goldhammer, T, Kellermann, MY, Zabel, M and Hinrichs, KU (2012) Towards constraining H2 concentration in subseafloor sediment: a proposal for combined analysis by two distinct approaches. Geochimica et Cosmochimica Acta, 77(15). 186-201. doi:10.1016/j.gca.2011.11.008 PANGAEA Supplementary Data

76

Gregg, WW, Friedrichs, MAM, Robinson, AR, Rose, KA, Schlitzer, R, Thompson, KR and Doney, SC (2009) Skill assessment in ocean biological data assimilation. Journal of Marine Systems, 76(1-2). 16-33. doi:10.1016/j.marsys.2008.05.006

Krylova, EM, Sahling, H and Janssen, R (2010) Abyssogena: a new genus of the family Vesicomyidae (Bivalvia) from deep-water vents and seeps. Journal of Molluscan Studies, 76(2). 107-132. doi:10.1093/mollus/eyp052 PANGAEA Supplementary Data

Santillano, D, Boetius, A and Ramette, A (2010) Improved dsrA-based terminal restriction fragment length polymorphism analysis of sulfate-reducing racteria. Applied and Environmental Microbiology, 76(15). 5308-5311. doi:10.1128/AEM.03004-09

Schubert, CJ, Vazquez, F, Lösekann-Behrens, T, Knittel, K, Tonolla, M and Boetius, A (2011) Evidence for anaerobic oxidation of methane in sediments of a freshwater system (Lago di Cadagno). FEMS Microbiology Ecology, 76(1). 26-38. doi:10.1111/j.1574-6941.2010.01036.x

Stief, P, Behrendt, A, Lavik, G and de Beer, D (2010) Combined Gel Probe and Isotope Labeling Technique for Measuring Dissimilatory Nitrate Reduction to Ammonium in Sediments at Millimeter-Level Resolution. Applied and Environmental Microbiology, 76(18). 6239-6247. doi:10.1128/AEM.01104-10

Wegener, G, Laso-Pérez, R, Orphan, VJ and Boetius, A (2022) Anaerobic degradation of alkanes by marine archaea. Annual Review of Microbiology, 76(1). 553-577. doi:10.1146/annurev-micro-111021-045911

758

Cai, M, Richter-Heitmann, T, Yin, X, Huang, WC, Yang, Y, Zhang, C, Duan, C, Pan, J, Liu, Y, Liu, Y, Friedrich, MW and Li, M (2021) Ecological features and global distribution of Asgard archaea. Science of The Total Environment, 758. 143581. doi:10.1016/j.scitotenv.2020.143581

75

Amend, JP, McCommon, TM, Hentscher, M and Bach, W (2011) Catabolic and anabolic energy for chemolithoautotrophs in deep-sea hydrothermal systems hosted in different rock types. Geochimica et Cosmochimica Acta, 75. 5736-5748. doi:10.1016/j.gca.2011.07.041

Goldhammer, T, Brunner, B, Bernasconi, SM, Ferdelman, TG and Zabel, M (2011) Phosphate oxygen isotopes: Insights into sedimentary phoshorus cycling from the Benguela upwelling system. Geochimica et Cosmochimica Acta, 75(13). 3741-3756. doi:10.1016/j.gca.2011.04.006 PANGAEA Supplementary Data

Kisakürek, B, Eisenhauer, A, Böhm, F, Hathorne, EC and Erez, J (2011) Controls on calcium isotope fractionation in cultured planktonic foraminifera, Globigerinoides ruber and Globigerinella siphonifera. Geochimica et Cosmochimica Acta, 75(2). 427-443. doi:10.1016/j.gca.2010.10.015 PANGAEA Supplementary Data

Kretschmer, S, Geibert, W, Rutgers van der Loeff, MM, Schnabel, C, Xu, S and Mollenhauer, G (2011) Fractionation of **230Th, **231Pa, and **10Be induced by particle size and composition within an opal-rich sediment of the Atlantic Southern Ocean. Geochimica et Cosmochimica Acta, 75(22). 6971-6987. doi:10.1016/j.gca.2011.09.012 PANGAEA Supplementary Data

Lü, X, Yang, H, Song, J, Versteegh, GJM, Li, X, Yuan, H, Li, N, Yang, C, Yang, Y, Ding, W and Xie, S (2014) Sources and distribution of isoprenoid glycerol dialkyl glycerol tetraethers (GDGTs) in sediments from the east coastal sea of China: Application of GDGT-based paleothermometry to a shallow marginal sea. Organic Geochemistry, 75. 24-35. doi:10.1016/j.orggeochem.2014.06.007

Marcon, Y, Sahling, H, Borowski, C, dos Santos Ferreira, C, Thal, J and Bohrmann, G (2013) Megafaunal distribution and assessment of total methane and sulfide consumption by mussel beds at Menez Gwen hydrothermal vent, based on geo-referenced photomosaics. Deep Sea Research Part I: Oceanographic Research Papers, 75. 93-109. doi:10.1016/j.dsr.2013.01.008 PANGAEA Supplementary Data

März, C, Stratmann, A, Matthiessen, J, Meinhardt, AK, Eckert, S, Schnetger, B, Vogt, C, Stein, R and Brumsack, HJ (2011) Manganese-rich brown layers in Arctic Ocean sediments: Composition, formation mechanisms, and diagenetic overprint. Geochimica et Cosmochimica Acta, 75(23). 7668-7687. doi:10.1016/j.gca.2011.09.046 PANGAEA Supplementary Data

Reeves, EP, Seewald, JS, Saccocia, PJ, Bach, W, Craddock, PR, Shanks, WC, Sylva, SP, Walsh, EA, Pichler, T and Rosner, M (2011) Geochemistry of hydrothermal fluids from the PACMANUS, Northeast Pual and Vienna Woods vent fields, Manus Basin, Papua New Guinea. Geochimica et Cosmochimica Acta, 75(4). 1088-1123. doi:10.1016/j.gca.2010.11.008

Reitz, A, Pape, T, Haeckel, M, Schmidt, M, Berner, U, Scholz, F, Liebetrau, V, Aloisi, G, Weise, SM and Wallmann, K (2011) Sources of fluids and gases expelled at cold seeps offshore Georgia, eastern Black Sea. Geochimica et Cosmochimica Acta, 75. 3250-3268. doi:10.1016/j.gca.2011.03.018

Rossel, PE, Elvert, M, Ramette, A, Boetius, A and Hinrichs, KU (2011) Factors controlling the distribution of anaerobic methanotrophic communities in marine environments: Evidence from intact polar membrane lipids. Geochimica et Cosmochimica Acta, 75(1). 164-184. doi:10.1016/j.gca.2010.09.031

Schubotz, F, Lipp, JS, Elvert, M and Hinrichs, KU (2011) Stable carbon isotopic compositions of intact polar lipids reveal complex carbon flow patterns among hydrocarbon degrading microbial communities at the Chapopote asphalt volcano. Geochimica et Cosmochimica Acta, 75(16). 4399-4415. doi:10.1016/j.gca.2011.05.018

Schubotz, F, Lipp, JS, Elvert, M, Kasten, S, Mollar, XP, Zabel, M, Bohrmann, G and Hinrichs, KU (2011) Petroleum degradation and associated microbial signatures at the Chapopote asphalt volcano, Southern Gulf of Mexico. Geochimica et Cosmochimica Acta, 75(16). 4377-4398. doi:10.1016/j.gca.2011.05.025

Sogin, EM, Kleiner, M, Borowski, C, Gruber-Vodicka, HR and Dubilier, N (2021) Life in the dark: phylogenetic and physiological diversity of chemosynthetic aymbioses. Annual Review of Microbiology, 75(1). 695-718. doi:10.1146/annurev-micro-051021-123130

74

Craddock, PR and Bach, W (2010) Insights to magmatic-hydrothermal processes in the Manus back-arc basin as recorded by anhydrite. Geochimica et Cosmochimica Acta, 74(19). 5514-5536. doi:10.1016/j.gca.2010.07.004 PANGAEA Supplementary Data

Craddock, PR, Bach, W, Seewald, JS, Rouxel, OJ, Reeves, EP and Tivey, MK (2010) Rare earth element abundances in hydrothermal fluids from the Manus Basin, Papua New Guinea: Indicators of sub-seafloor hydrothermal processes in back-arc basins. Geochimica et Cosmochimica Acta, 74(19). 5494-5513. doi:10.1016/j.gca.2010.07.003

Ertefai, TF, Heuer, VB, Prieto-Mollar, X, Vogt, C, Sylva, SP, Seewald, JS and Hinrichs, KU (2010) The biogeochemistry of sorbed methane in marine sediments. Geochimica et Cosmochimica Acta, 74. 6033-6048. doi:10.1016/j.gca.2010.08.006 PANGAEA Supplementary Data

Lichtschlag, A, Felden, J, Wenzhöfer, F, Schubotz, F, Ertefai, TF, Boetius, A and de Beer, D (2010) Methane and sulfide fluxes in permanent anoxia: In situ studies at the Dvurechenskii mud volcano (Sorokin Trough, Black Sea). Geochimica et Cosmochimica Acta, 74(17). 5002-5018. doi:10.1016/j.gca.2010.05.031

Mottl, MJ, Seewald, JS, Wheat, CG, Tivey, MK, Michael, P, Proskurowski, G, McCollom, TM, Reeves, EP, Sharkey, J, You, CF, Chan, LH and Pichler, T (2011) Chemistry of hot springs along the Eastern Lau Spreading Center. Geochimica et Cosmochimica Acta, 74(4). 1013-1038. doi:10.1016/j.gca.2010.12.008

Strapoc, D, Picardal, FW, Turich, C, Schaperdoth, I, Macalady, JL, Lipp, JS, Lin, YS, Ertefai, TF, Schubotz, F, Hinrichs, KU, Mastalerz, M and Schimmelmann, A (2008) Methane-Producing Microbial Community in a Coal Bed of the Illinois Basin. Applied and Environmental Microbiology, 74. 2424-2432. doi:10.1128/AEM.02341-07

73

Blumenberg, M, Seifert, R, Kasten, S, Bahlmann, E and Michaelis, W (2009) Euphotic zone bacterioplankton sources major bacteriohopanepolyols in the Holocene Black Sea. Geochimica et Cosmochimica Acta, 73(3). 750-766. doi:10.1016/j.gca.2008.11.005

Dunker, R, Røy, H and Jørgensen, BB (2010) Temperature regulation of gliding motility in filamentous sulfur bacteria, Beggiatoa spp. FEMS Microbiology Ecology, 73(2). 234-242. doi:10.1111/j.1574-6941.2010.00887.x

Elshahed, MS, Youssef, NH, Luo, Q, Najar, FZ, Roe, BA, Sisk, TM, Bühring, S, Hinrichs, KU and Krumholz, LR (2007) Phylogenetic and Metabolic Diversity of Planctomycetes from Anaerobic, Sulfide- and Sulfur-Rich Zodletone Spring, Oklahoma. Applied and Environmental Microbiology, 73(15). 4707-4716. doi:10.1128/AEM.00591-07

Heuer, VB, Pohlman, JW, Torres, ME, Elvert, M and Hinrichs, KU (2009) The stable carbon isotope biogeochemistry of acetate and other dissolved carbon species in deep subseafloor sediments at the northern Cascadia Margin. Geochimica et Cosmochimica Acta, 73. 3323-3336. doi:10.1016/j.gca.2009.03.001 PANGAEA Supplementary Data

Jørgensen, BB, Dunker, R, Grünke, S and Røy, H (2010) Filamentous sulfur bacteria, Beggiatoa spp., in arctic marine sediments (Svalbard, 79° N). FEMS Microbiology Ecology, 73(3). 500-513. doi:10.1111/j.1574-6941.2010.00918.x

Klein, F, Bach, W, Jöns, N, McCollom, TM, Moskowitz, B and Berquo, T (2009) Iron Partitioning and Hydrogen Generation During Serpentinization of Abyssal Perdotites from 15°N on the Mid-Atlantic Ridge. Geochimica et Cosmochimica Acta, 73(22). 6868-6893. doi:10.1016/j.gca.2009.08.021 PANGAEA Supplementary Data

Lipp, JS and Hinrichs, KU (2009) Structural diversity and fate of intact polar lipids in marine sediments. Geochimica et Cosmochimica Acta, 73(22). 6816-6833. doi:10.1016/j.gca.2009.08.003 PANGAEA Supplementary Data

Lippold, J, Christl, M, Hofmann, AW, Mollenhauer, G, Mulitza, S, Weyer, S and Mangini, A (2009) The response of sedimentary 231Pa/230Th on particle flux - findings from the African margin. Geochimica et Cosmochimica Acta, 73. A772.

McCollom, TM and Bach, W (2009) Thermodynamic constraints on hydrogen generation during serpentinization of ultramafic rocks. Geochimica et Cosmochimica Acta, 73. 856-875. doi:10.1016/j.gca.2008.10.032

Schmidt, F, Elvert, M, Koch, BP, Witt, M and Hinrichs, KU (2009) Molecular characterization of dissolved organic matter in pore water of continental shelf sediments. Geochimica et Cosmochimica Acta, 73(11). 3337-3358. doi:10.1016/j.gca.2009.03.008

Toner, BM, Santelli, CM, Marcus, MA, Wirth, R, Chan, CS, McCollom, TM, Bach, W and Edwards, KJ (2009) Biogenic iron oxyhydroxide formation at mid-ocean ridge hydrothermal vents: Juan de Fuca Ridge. Geochimica et Cosmochimica Acta, 73. 388-403. doi:10.1016/j.gca.2008.09.035

72

Amini, M, Eisenhauer, A, Böhm, F, Fietzke, J, Bach, W, Garbe-Schönberg, CD, Rosner, M, Bock, B, Lackschewitz, KS and Hauff, V (2008) Calcium isotope (d44/40Ca)fractionation along hydrothermal pathways, Logatchev field (Mid-Atlantic Ridge, 14°45'N). Geochimica et Cosmochimica Acta, 72(16). 4107-4122. doi:10.1016/j.gca.2008.05.055 PANGAEA Supplementary Data

Basse, A, Zhu, C, Versteegh, GJM, Fischer, G, Hinrichs, KU and Mollenhauer, G (2014) Distribution of intact and core tetraether lipids in water column profiles of suspended particulate matter off Cape Blanc, NW Africa. Organic Geochemistry, 72. 1-13. doi:10.1016/j.orggeochem.2014.04.007 PANGAEA Supplementary Data

Krylova, EM and Sahling, H (2006) Recent bivalve molluscs of the genus Calyptogena (Vesicomyidae). Journal of Molluscan Studies, 72. 359-395. doi:10.1093/mollus/eyl022 PANGAEA Supplementary Data

Lippold, J, Christl, M, Gruetzner, J, Lahaye, Y, Winter, DM and Mangini, A (2008) Display sedimentary 231Pa/230Th ratios the deep water circulation of the Atlantic Ocean? - An approach for the past 30,000 years. Geochimica et Cosmochimica Acta, 72(12). A555.

März, C, Poulton, SW, Beckmann, B, Küster, K, Wagner, T and Kasten, S (2008) Redox sensitivity of P cycling during black shale formation: Dynamics of sulfidic and anoxic, non-sulfidic bottom waters. Geochimica et Cosmochimica Acta, 72(15). 3703-3717. doi:10.1016/j.gca.2008.04.025 PANGAEA Supplementary Data

Neuer, S, Cianca, A, Helmke, P, Freudenthal, T, Davenport, R, Meggers, H, Knoll, M, Santana-Casiano, JM, Gonzalez Davila, M, Rueda, MJ and Llinás, O (2007) Biogeochemistry and hydrography in the eastern subtropical North Atlantic gyre. Results from the European time-series station ESTOC. Progress in Oceanography, 72. 1-29. doi:10.1016/j.pocean.2006.08.001

Schwermer, CU, Ferdelman, TG, Stief, P, Gieseke, A, Rezakhani, N, van Rijn, J, de Beer, D and Schramm, A (2010) Effect of nitrate on sulfur transformations in sulfidogenic sludge of a marine aquaculture biofilter. FEMS Microbiology Ecology, 72(3). 476-484. doi:10.1111/j.1574-6941.2010.00865.x

71

Bligh, M, Nguyen, N, Buck-Wiese, H, Vidal-Melgosa, S and Hehemann, JH (2022) Structures and functions of algal glycans shape their capacity to sequester carbon in the ocean. Current Opinion in Chemical Biology, 71. 102204. doi:10.1016/j.cbpa.2022.102204

Xie, S, Liu, XL, Schubotz, F, Wakeham, SG and Hinrichs, KU (2014) Distribution of glycerol ether lipids in the oxygen minimum zone of the Eastern Tropical North Pacific Ocean. Organic Geochemistry, 71. 60-71. doi:10.1016/j.orggeochem.2014.04.006

70

Böhm, F, Gussone, N, Eisenhauer, A, Dullo, WC, Reynaud, S and Paytan, A (2006) Calcium isotope fractionation in modern scleractinian corals. Geochimica et Cosmochimica Acta, 70. 4452-4462. doi:10.1016/j.gca.2006.06.1546

Keir, R, Sültenfuß, J, Rhein, M, Petrick, G and Greinert, J (2006) Separation of 3He and CH4 signals on the Mid-Atlantic Ridge at 5°N and at 51°N. Geochimica et Cosmochimica Acta, 70(23). 5766-5778. doi:10.1016/j.gca.2006.06.005

Niemann, H, Duarte, J, Hensen, C, Omoregie, EO, Magalhães, VH, Elvert, M, Kopf, AJ and Boetius, A (2006) Microbial methane turnover at mud volcanoes fo the Gulf of Cadiz. Geochimica et Cosmochimica Acta, 70(21). 5336-5355. doi:10.1016/j.gca.2006.08.010

7

Addamo, AM, Reimer, JD, Taviani, M, Freiwald, A and Machordom, A (2012) Desmophyllum dianthus (Esper, 1794) in the Scleractinian Phylogeny and Its Intraspecific Diversity. PLoS ONE, 7. doi:10.1371/journal.pone.0050215

Adhikari, RR, Glombitza, C, Nickel, JC, Anderson, CH, Dunlea, AG, Spivack, AJ, Murray, RW, d'Hondt, SL and Kallmeyer, J (2016) Hydrogen utilization potential in subsurface sediments. Frontiers in Microbiology, 7. doi:10.3389/fmicb.2016.00008

Allen, KD, Wegener, G, Sublett JR, DM, Bodnar, RJ, Feng, X, Wendt, J and White, RH (2021) Biogenic formation of amorphous carbon by anaerobic methanotrophs and select methanogens. Science Advances, 7(44). doi:10.1126/sciadv.abg9739

Alt, JC and Bach, W (2006) The oxygen isotope composition of a section of lower oceanic crust, ODP Hole 735B. Geochemistry Geophysics Geosystems, 7(12). Q12008. doi:10.1029/2006GC001385

Arning, ET, Birgel, D, Brunner, B and Peckmann, JL (2009) Bacterial formation of phosphatic laminites off Peru. Geobiology, 7. 295-307. doi:10.1111/j.1472-4669.2009.00197.x PANGAEA Supplementary Data

Bach, W (2016) Some compositional and kinetic controls on the bioenergetic landscapes in oceanic basement. Frontiers in Microbiology, 7. 107. doi:10.3389/fmicb.2016.00107

Bühring, S, Elvert, M and Witte, U (2005) The microbial community structure of different permeable sandy sediments characterized by the investigation of bacterial fatty acids and fluorescence in situ hybridisation. Environmental Microbiology, 7(2). 281-293. doi:10.1111/j.1462-2920.2004.00710.x

Bühring, S, Smittenberg, RH, Sachse, D, Lipp, JS, Golubic, S, Sachs, JP, Hinrichs, KU and Summons, RE (2009) A hypersaline microbial mat from the Pacific Atoll Kiritimati: Insight into composition and carbon fixation using biomarker analyses and a 13C-labeling approach. Geobiology, 7(3). 308 - 323. doi:10.1111/j.1472-4669.2009.00198.x PANGAEA Supplementary Data

Dowell, F, Cardman, Z, Dasarathy, S, Kellermann, MY, Lipp, JS, Ruff, SE, Biddle, JF, McKay, LJ, MacGregor, BJ, Lloyd, KG, Albert, DB, Mendlovitz, H, Hinrichs, KU and Teske, A (2016) Microbial communities in methane- and short chain alkane-rich hydrothermal sediments of Guaymas Basin. Frontiers in Microbiology, 7. doi:10.3389/fmicb.2016.00017

Fischer, C, Finkeldei, S, Brandt, F, Bosbach, D and Lüttge, A (2015) Direct measurement of surface dissolution rates in potential nuclear waste forms: the example of pyrochlore. ACS Applied Materials & Interfaces, 7(32). 17857-17865. doi:10.1021/acsami.5b04281 PANGAEA Supplementary Data

Giering, SLC, Hosking, B, Briggs, N and Iversen, MH (2020) The interpretation of particle size,shape, and carbon flux of marine particle images is strongly affected by the choice of particle detection algorithm. Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00564

Glombitza, C, Adhikari, RR, Riedinger, N, Gilhooly, WP, Hinrichs, KU and Inagaki, F (2016) Microbial sulfate reduction potential in coal-bearing sediments down to ~2.5 km below the seafloor off Shimokita peninsula, Japan. Frontiers in Microbiology, 7. doi:10.3389/fmicb.2016.01576

Gomez-Saez, GV, Dittmar, T, Holtappels, M, Pohlabeln, AM, Lichtschlag, A, Schnetger, B, Boetius, A and Niggemann, J (2021) Sulfurization of dissolved organic matter in the anoxic water column of the Black Sea. Science Advances, 7(25). eabf6199. doi:10.1126/sciadv.abf6199

Hassenrück, C, Hofmann, LC, Bischof, K and Ramette, A (2015) Seagrass biofilm communities at a naturally CO2-rich vent. Environmental Microbiology Reports, 7(3). 516-525. doi:10.1111/1758-2229.12282 PANGAEA Supplementary Data

Iversen, MH and Ploug, H (2010) Ballast minerals and the sinking carbon flux in the ocean: carbon-specific respiration rates and sinking velocity of marine snow aggregates. Biogeosciences, 7(9). 2613-2624. doi:10.5194/bg-7-2613-2010

Jaekel, U, Musat, N, Adam, B, Kuypers, MMM, Grundmann, O and Musat, F (2013) Anaerobic degradation of propane and butane by sulfate-reducing bacteria enriched from marine hydrocarbon cold seeps. ISME Journal, 7(5). 885-895. doi:10.1038/ismej.2012.159

Jessen, GL, Lichtschlag, A, Struck, U and Boetius, A (2016) Distribution and composition of thiotrophic mats in the hypoxic zone of the Black Sea (150–170 m water depth, Crimea Margin). Frontiers in Microbiology, 7. doi:10.3389/fmicb.2016.01011 PANGAEA Supplementary Data

Kharbush, JJ, Close, HG, Van Mooy, BAS, Arnosti, C, Smittenberg, RH, Le Moigne, FAC, Mollenhauer, G, Scholz-Böttcher, B, Obreht, I, Koch, BP, Becker, KW, Iversen, MH and Mohr, W (2020) Particulate organic carbon deconstructed: molecular and chemical composition of particulate organic carbon in the ocean. Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00518

Koopmans, D, Holtappels, M, Chennu, A, Weber, M and de Beer, D (2020) High net primary production of Mediterranean seagrass (Posidonia oceanica) meadows determined with aquatic eddy covariance. Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00118

Kusch, S, Kashiyama, Y, Ogawa, NO, Altabet, MA, Butzin, M, Friedrich, J, Ohkouchi, N and Mollenhauer, G (2010) Implications for chloro- and pheopigment synthesis and preservation from combined compound-specific d13C, d15N, and d14C analysis. Biogeosciences, 7(12). 4105-4118. doi:10.5194/bg-7-4105-2010

Küster-Heins, K, de Lange, GJ and Zabel, M (2010) Benthic phosphorus and iron budgets for three NW African slope sediments: a balance approach. Biogeosciences, 7(2). 469-480. doi:10.5194/bg-7-469-2010

Lagostina, L, Goldhammer, T, Røy, H, Evans, TW, Lever, MA, Jørgensen, BB, Petersen, DG, Schramm, A and Schreiber, L (2015) Ammonia-oxidizing Bacteria of the Nitrosospira cluster 1 dominate over ammonia-oxidizing Archaea in oligotrophic surface sediments near the South Atlantic Gyre. Environmental Microbiology Reports, 7(3). 404-413. doi:10.1111/1758-2229.12264

Lin, YS, Heuer, VB, Ferdelman, TG and Hinrichs, KU (2010) Microbial conversion of inorganic carbon to dimethyl sulfide in anoxic lake sediment (Plußsee, Germany). Biogeosciences, 7(8). 2433-2444. doi:10.5194/bg-7-2433-2010 PANGAEA Supplementary Data

Lin, YS, Koch, BP, Feseker, T, Ziervogel, K, Goldhammer, T, Schmidt, F, Witt, M, Kellermann, MY, Zabel, M, Teske, A and Hinrichs, KU (2017) Near-surface heating of young rift sediment causes mass production and discharge of reactive dissolved organic matter. Scientific Reports, 7. 44864. doi:10.1038/srep44864

Lüttge, A, Arvidson, RS and Fischer, C (2013) Fundamental controls of dissolution rate spectra: comparisons of model and experimental results. Procedia Earth and Planetary Science, 7. 537-540. doi:10.1016/j.proeps.2013.03.115

Markussen, TN, Konrad, C, Waldmann, C, Becker, M, Fischer, G and Iversen, MH (2020) Tracks in the snow – advantage of combining optical methods to characterize marine particles and aggregates. Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00476

Mau, S, Römer, M, Torres, ME, Bussmann, I, Pape, T, Damm, E, Geprägs, P, Wintersteller, P, Hsu, CW, Loher, M and Bohrmann, G (2017) Widespread methane seepage along the continental margin off Svalbard - from Bjørnøya to Kongsfjorden. Scientific Reports, 7. 42997. doi:10.1038/srep42997 PANGAEA Supplementary Data

Nöthig, EM, Ramondenc, S, Haas, A, Hehemann, L, Walter, A, Bracher, A, Lalande, C, Metfies, K, Peeken, I, Bauerfeind, E and Boetius, A (2020) Summertime chlorophyll a and particulate organic carbon standing stocks in surface waters of the Fram Strait and the Arctic Ocean (1991–2015). Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00350

Rossel, PE, Bienhold, C, Hehemann, L, Dittmar, T and Boetius, A (2020) Molecular composition of dissolved organic matter in dediment porewater of the Arctic deep-sea observatory HAUSGARTEN (Fram Strait). Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00428

Ruff, SE, Kuhfuss, H, Wegener, G, Lott, C, Ramette, A, Wiedling, J, Knittel, K and Weber, M (2016) Methane seep in shallow-water permeable sediment harbors high diversity of anaerobic methanotrophic communities, Elba, Italy. Frontiers in Microbiology, 7. doi:10.3389/fmicb.2016.00374

Saad, KM, Wunch, D, Toon, GC, Bernath, P, Boone, C, Connor, B, Deutscher, NM, Griffith, DWT, Kivi, R, Notholt, J, Roehl, C, Schneider, M, Sherlock, V and Wennberg, PO (2014) Derivation of tropospheric methane from TCCON CH4 and HF total column observations. Atmospheric Measurement Techniques, 7(9). 2907-2918. doi:10.5194/amt-7-2907-2014

Schöttner, S, Wild, C, Hoffmann, F, Boetius, A and Ramette, A (2012) Spatial Scales of Bacterial Diversity in Cold-Water Coral Reef Ecosystems. PLoS ONE, 7(3). doi:10.1371/journal.pone.0032093

Sepúlveda, E, Schneider, M, Hase, F, Barthlott, S, Dubravica, D, García, OE, Gomez-Pelaez, A, González, Y, Guerra, JC, Gisi, M, Kohlhepp, R, Dohe, S, Blumenstock, T, Strong, K, Weaver, D, Palm, M, Sadeghi, A, Deutscher, NM, Warneke, T, Notholt, J, Jones, N, Griffith, DWT, Smale, D, Brailsford, GW, Robinson, J, Meinhardt, F, Steinbacher, M, Aalto, T and Worthy, D (2014) Tropospheric CH4 signals as observed by NDACC FTIR at globally distributed sites and comparison to GAW surface in situ measurements. Atmospheric Measurement Techniques, 7(7). 2337-2360. doi:10.5194/amt-7-2337-2014

Steen, AD, Kusch, S, Abdulla, HA, Cakić, N, Coffinet, S, Dittmar, T, Fulton, JM, Galy, V, Hinrichs, KU, Ingalls, AE, Koch, BP, Kujawinski, E, Liu, Z, Osterholz, H, Rush, D, Seidel, M, Sepúlveda, J and Wakeham, SG (2020) Analytical and computational advances, opportunities, and challenges in marine organic biogeochemistry in an Era of “Omics”. Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00718

Tonai, S, Kubo, Y, Tsang, MY, Bowden, S, Ide, K, Hirose, T, Kamiya, N, Yamamoto, Y, Yang, K, Yamada, Y, Morono, Y, Heuer, VB, Inagaki, F and Expedition 370 Scientists (2019) A new method for quality control of geological cores by X-ray computed tomography: application in IODP Expedition 370. Frontiers in Earth Science, 7. doi:10.3389/feart.2019.00117

Wagner, S, Schubotz, F, Kaiser, K, Hallmann, C, Waska, H, Rossel, PE, Hansman, R, Elvert, M, Middelburg, JJ, Engel, A, Blattmann, TM, Catalá, TS, Lennartz, ST, Gomez-Saez, GV, Pantoja-Gutiérrez, S, Bao, R and Galy, V (2020) Soothsaying DOM: a current perspective on the future of oceanic dissolved organic carbon. Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00341

Wang, Y, Wegener, G, Williams, TA, Xie, R, Hou, J, Tian, C, Zhang, Y, Wang, F and Xiao, X (2021) A methylotrophic origin of methanogenesis and early divergence of anaerobic multicarbon alkane metabolism. Science Advances, 7(27). eabj1453. doi:10.1126/sciadv.abj1453

Wang, Z, Deutscher, NM, Warneke, T, Notholt, J, Dils, B, Griffith, DWT, Schmidt, M, Ramonet, M and Gerbig, C (2014) Retrieval of tropospheric column-averaged CH4 mole fraction by solar absorption FTIR-spectrometry using N2O as a proxy. Atmospheric Measurement Techniques, 7(10). 3295-3305. doi:10.5194/amt-7-3295-2014

Wangpraseurt, D, Weber, M, Røy, H, Polerecky, L, de Beer, D, Suharsono and Nugues, MM (2012) In Situ Oxygen Dynamics in Coral-Algal Interactions. PLoS ONE, 7(2). doi:10.1371/journal.pone.0031192

Wegener, G, Gropp, J, Taubner, H, Halevy, I and Elvert, M (2021) Sulfate-dependent reversibility of intracellular reactions explains the opposing isotope effects in the anaerobic oxidation of methane. Science Advances, 7(19). eabe4939. doi:10.1126/sciadv.abe4939

Wegener, G, Krukenberg, V, Ruff, SE, Kellermann, MY and Knittel, K (2016) Metabolic capabilities of microorganisms involved in and associated with the anaerobic oxidation of methane. Frontiers in Microbiology, 7. doi:10.3389/fmicb.2016.00046

Wentrup, C, Wendeberg, A, Huang, JY, Borowski, C and Dubilier, N (2013) Shift from widespread symbiont infection of host tissues to specific colonization of gills in juvenile deep-sea mussels. The ISME Journal, 7(6). 1244-1247. doi:10.1038/ismej.2013.5

Wisshak, M, Schönberg, CHL, Form, A and Freiwald, A (2012) Ocean Acidification Accelerates Reef Bioerosion. PLoS ONE, 7. doi:10.1371/journal.pone.0045124 PANGAEA Supplementary Data

Yanagawa, K, Morono, Y, de Beer, D, Haeckel, M, Sunamura, M, Futagami, T, Hoshino, T, Terada, T, Nakamura, K, Urabe, T, Rehder, G, Boetius, A and Inagaki, F (2013) Metabolically active microbial communities in marine sediment under high-CO2 and low-pH extremes. Isme Journal, 7(3). 555-567. doi:10.1038/ismej.2012.124

Yoshinaga, MY, Holler, T, Goldhammer, T, Wegener, G, Pohlman, JW, Brunner, B, Kuypers, MMM, Hinrichs, KU and Elvert, M (2014) Carbon isotope equilibration during sulphate-limited anaerobic oxidation of methane. Nature Geoscience, 7(3). 190-194. doi:10.1038/NGEO2069

van der Heijden, K, Petersen, JM, Dubilier, N and Borowski, C (2012) Genetic connectivity between North and South Mid-Atlantic Ridge chemosynthetic bivalves and their symbionts. PLoS ONE, 7(7). e39994. doi:10.1371/journal.pone.0039994

van der Jagt, H, Wiedmann, I, Hildebrandt, N, Niehoff, B and Iversen, MH (2020) Aggregate feeding by the copepods Calanus and Pseudocalanus controls carbon flux attenuation in the Arctic shelf sea during the productive period. Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.543124

69

Gussone, N, Böhm, F, Eisenhauer, A, Dietzel, M, Heuser, A, Teichert, BMA, Reitner, J, Wörheide, G and Dullo, WC (2005) Calcium isotope fractionation in calcite and aragonite. Geochimica et Cosmochimica Acta, 69(18). 4485-4494. doi:10.1016/j.gca.2005.06.003

Humphris, SE and Bach, W (2005) On the Sr isotope and REE compositions of anhydrites from the TAG seafloor hydrothermal system. Geochimica et Cosmochimica Acta, 69(6). 1511-1525. doi:10.1016/j.gca.2004.10.004 PANGAEA Supplementary Data

Meador, TB, Zhu, C, Elling, FJ, Könneke, M and Hinrichs, KU (2014) Identification of isoprenoid glycosidic glycerol dibiphytanol diethers and indications for their biosynthetic origin. Organic Geochemistry, 69. 70-75. doi:10.1016/j.orggeochem.2014.02.005

Orcutt, B, Boetius, A, Elvert, M, Samarkin, VA and Joye, SB (2005) Molecular biogeochemistry of sulfate reduction, methanogenesis and the anaerobic oxidation of methane at Gulf of Mexico cold seep. Geochimica et Cosmochimica Acta, 69(17). 4267-4281. doi:10.1016/j.gca.2005.04.012

Riedinger, N, Pfeifer, K, Kasten, S, Garming, JFL, Vogt, C and Hensen, C (2005) Diagenetic alteration of magnetic signals by anaerobic oxidation of methane related to a change in sedimentation rate. Geochimica et Cosmochimica Acta, 69. 4117-4126. doi:10.1016/j.gca.2005.02.004 PANGAEA Supplementary Data

68

Aloisi, G, Wallmann, K, Bollwerk, S, Derkachev, AN, Bohrmann, G and Suess, E (2004) The effect of dissolved barium on biogeochemical processes at cold seeps. Geochimica et Cosmochimica Acta, 68(8). 1835-1748. doi:10.1016/j.gca.2003.10.010

Gerilowski, K, Krings, T, Hartmann, J, Buchwitz, M, Sachs, T, Erzinger, JA, Burrows, JP and Bovensmann, H (2015) Atmospheric remote sensing constraints on direct sea-air methane flux from the 22/4b North Sea massive blowout bubble plume. Marine and Petroleum Geology, 68. 824-835. doi:10.1016/j.marpetgeo.2015.07.011

Teichert, BMA, Eisenhauer, A, Bohrmann, G, Haase-Schramm, A, Bock, B and Linke, P (2004) Erratum to "U/Th Systematics and ages of authigenic carbonates from Hydrate Ridge, Cascadia Margin: Recorders of fluid flow variations" [Geochimica et Cosmochimica Acta 67(20), 3845-3857]. Geochimica et Cosmochimica Acta, 68(10). 2401-2403. doi:10.1016/j.gca.2004.01.001

Versteegh, GJM, Schefuß, E, Dupont, LM, Marret, F, Sinninghe Damsté, JS and Jansen, JHF (2004) Taraxerol and Rhizophora pollen as proxies for tracking past mangrove ecosystems. Geochimica et Cosmochimica Acta, 68(3). 411-422. doi:10.1016/S0016-7037(03)00456-3 PANGAEA Supplementary Data

67

Brüchert, V, Jørgensen, BB, Neumann, K, Riechmann, D, Schlösser, M and Schulz, H (2003) Regulation of bacterial sulfate reduction and hydrogen sulfide fluxes in the central namibian coastal upwelling zone. Geochimica et Cosmochimica Acta, 67(23). 4505-4518. doi:10.1016/S0016-7037(03)00275-8

Hensen, C, Zabel, M, Pfeifer, K, Schwenk, T, Kasten, S, Riedinger, N, Schulz, HD and Boetius, A (2003) Control of sulfate pore-water profiles by sedimentary events and the significance of anaerobic oxidation of methane for the burial of sulfur in marine sediments. Geochimica et Cosmochimica Acta, 67(14). 2631-2647. doi:10.1016/S0016-7037(03)00199-6

McKay, LJ, MacGregor, BJ, Biddle, JF, Albert, DB, Mendlovitz, HP, Hoer, DR, Lipp, JS, Lloyd, KG and Teske, AP (2012) Spatial heterogeneity and underlying geochemistry of phylogenetically diverse orange and white Beggiatoa mats in Guaymas Basin hydrothermal sediments. Deep Sea Research Part I: Oceanographic Research Papers, 67. 21-31. doi:10.1016/j.dsr.2012.04.011

Mollenhauer, G, Eglinton, TI, Ohkouchi, N, Schneider, RR, Müller, PJ, Grootes, PM and Rullkötter, J (2003) Asynchronous alkenone and foraminifera records from the Benguela Upwelling System. Geochimica et Cosmochimica Acta, 67(12). 2157-2171. doi:10.1016/S0016-7037(03)00168-6 PANGAEA Supplementary Data

Schefuß, E, Ratmeyer, V, Stuut, JB, Jansen, JHF and Sinninghe Damsté, JS (2003) Carbon isotope analyses of n-alkanes in dust from the lower atmosphere over the central eastern Atlantic. Geochimica et Cosmochimica Acta, 67(10). 1757-1767. doi:10.1016/S0016-7037(02)01414-X PANGAEA Supplementary Data

Strittmatter, AW, Liesegang, H, Rabus, R, Decker, I, Amann, J, Andres, S and et al (2009) Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide. Environmental Microbiology, 67(5). 2145-2155. doi:10.1111/j.1462-2920.2008.01825.x

Teichert, BMA, Eisenhauer, A, Bohrmann, G, Haase-Schramm, A, Bock, B and Linke, P (2003) U/Th systematics and ages of authigenic carbonates from Hydrate Ridge, Cascadia Margin: Recorders of fluid flow variations. Geochimica et Cosmochimica Acta, 67(20). 3845-3857. doi:10.1016/S0016-7037(03)00128-5 PANGAEA Supplementary Data

Wagner, T, Kallweit, W, Talbot, HM, Mollenhauer, G, Boom, A and Zabel, M (2014) Microbial biomarkers support organic carbon transport from methane-rich Amazon wetlands to the shelf and deep sea fan during recent and glacial climate conditions. Organic Geochemistry, 67. 85-98. doi:10.1016/j.orggeochem.2013.12.003 PANGAEA Supplementary Data

Wenau, S, Spiess, V, Pape, T and Fekete, N (2015) Cold seeps at the salt front in the Lower Congo Basin I: Current methane accumulation and active seepage. Marine and Petroleum Geology, 67. 894-908. doi:10.1016/j.marpetgeo.2014.07.032 PANGAEA Supplementary Data

Wenau, S, Spiess, V, Pape, T and Fekete, N (2015) Cold seeps at the salt front in the Lower Congo Basin II: The impact of spatial and temporal evolution of salt-tectonics on hydrocarbon seepage. Marine and Petroleum Geology, 67. 880-893. doi:10.1016/j.marpetgeo.2014.09.021 PANGAEA Supplementary Data

66

Golyshina, OV, Golyshin, PN, Goldenstein, NI, Lünsdorf, H, Hinrichs, KU and Kublanov, IV (2016) The novel extremely acidophilic, cell-wall-deficient archaeon Cuniculiplasma divulgatum gen. nov., sp. nov. represents a new family, Cuniculiplasmataceae fam. nov., of the order Thermoplasmatales. International Journal of Systematic and Evolutionary Microbiology, 66(1). 332-340. doi:10.1099/ijsem.0.000725

Kölling, M, Webster, JM, Camoin, G, Iryu, Y, Bard, E and Seard, C (2009) SEALEX - Internal reef chronology and virtual drill logs from a spreadsheet-based reef growth model. Global and Planetary Change, 66(1-2). 149-159. doi:10.1016/j.gloplacha.2008.07.011

Pfeifer, K, Hensen, C, Adler, M, Wenzhöfer, F, Weber, B and Schulz, HD (2002) Modeling of subsurface calcite dissolution - including the respiration and re-oxidation processes of marine sediments in the region of equatorial upwelling off Gabon. Geochimica et Cosmochimica Acta, 66(24). 4247-4259. doi:10.1016/S0016-7037(02)01073-6 PANGAEA Supplementary Data

Plewa, K, Meggers, H, Kuhlmann, H, Freudenthal, T, Zabel, M and Kasten, S (2012) Geochemical distribution patterns as indicators for productivity and terrigenous input off NW Africa. Deep Sea Research Part I: Oceanographic Research Papers, 66. 51-66. doi:10.1016/j.dsr.2012.04.005 PANGAEA Supplementary Data

65

Feng, D, Lin, Z, Bian, Y, Chen, D, Peckmann, JL, Bohrmann, G and Roberts, HH (2013) Rare earth elements of seep carbonates: Indication for redox variations and microbiological processes at modern seep sites. Journal of Asian Earth Sciences, 65. 27-33. doi:10.1016/j.jseaes.2012.09.002 PANGAEA Supplementary Data

Freudenthal, T, Wagner, T, Wenzhöfer, F, Zabel, M and Wefer, G (2001) Early diagenesis of organic matter from sediments of the eastern subtropical Atlantic: Evidence from stable nitrogen and carbon isotopes. Geochimica Cosmochimica Acta, 65(11). 1795-1808. doi:10.1016/S0016-7037(01)00554-3 PANGAEA Supplementary Data

Rixen, T, Guptha, MVS and Ittekkot, V (2005) Deep ocean fluxes and their link to surface ocean processes and the biological pump. Progress in Oceanography, 65. 240-259. doi:10.1016/j.pocean.2005.03.006

Zhu, C, Lipp, JS, Wörmer, L, Becker, KW, Schröder, J and Hinrichs, KU (2013) Comprehensive glycerol ether lipid fingerprints through a novel reversed phase liquid chromatography–mass spectrometry protocol. Organic Geochemistry, 65. 53-62. doi:10.1016/j.orggeochem.2013.09.012

Zhu, R, Evans, TW, Wörmer, L, Lin, YS, Zhu, C and Hinrichs, KU (2013) Improved sensitivity of sedimentary phospholipid analysis resulting from a novel extract cleanup strategy. Organic Geochemistry, 65. 46-52. doi:10.1016/j.orggeochem.2013.10.002

64

Hahnke, S, Striesow, J, Elvert, M, Prieto-Mollar, X and Klocke, M (2014) Clostridium bornimense sp. nov., isolated from a mesophilic, two-phase, laboratory-scale biogas reactor. International Journal of Systematic and Evolutionary Microbiology, 64(Pt 8). 2792-2797. doi:10.1099/ijs.0.059691-0

Imachi, H, Sakai, S, Lipp, JS, Miyazaki, M, Saito, Y, Yamanaka, Y, Hinrichs, KU, Inagaki, F and Takai, K (2014) Pelolinea submarina gen. nov., sp. nov., an anaerobic, filamentous bacterium of the phylum Chloroflexi isolated from subseafloor sediment. International Journal of Systematic and Evolutionary Microbiology, 64(Pt 3). 812-818. doi:10.1099/ijs.0.057547-0

Karlen, DJ, Price, RE, Pichler, T and Garey, JR (2012) Changes in Benthic Macrofauna associated with a Shallow-water Hydrothermal Vent Gradient in Papua New Guinea. Pacific Science, 64(3). 391 - 404. doi:10.2984/64.3.391

63

Duperron, S, de Beer, D, Zbinden, M, Boetius, A, Schipani, V, Kahil, N and Gaill, F (2009) Molecular characterization of bacteria associated with the trophosome and the tube of Lamellibrachia sp., a siboglinid annelid from cold seeps in the eastern Mediterranean. FEMS Microbiology Ecology, 63(3). 395-409. doi:10.1111/j.1574-6941.2009.00724.x

Knittel, K and Boetius, A (2009) Anaerobic Oxidation of Methane: Progress with an Unknown Process. Annual Review of Microbiology, 63. 311-334. doi:10.1146/annurev.micro.61.080706.093130

Könneke, M, Kuever, J, Galushko, A and Jorgensen, BB (2013) Desulfoconvexum algidum gen. nov., sp. nov., a psychrophilic sulfate-reducing bacterium isolated from a permanently cold marine sediment. International Journal of Systematic and Evolutionary Microbiology, 63(Pt 3). 959-964. doi:10.1099/ijs.0.043703-0

Van der Jagt, H, Friese, C, Stuut, JBW, Fischer, G and Iversen, MH (2018) The ballasting effect of Saharan dust deposition on aggregate dynamics and carbon export: Aggregation, settling, and scavenging potential of marine snow. Limnology and Oceanography, 63(3). 1386-1394. doi:10.1002/lno.10779 PANGAEA Supplementary Data

Wakeham, SG, Turich, C, Schubotz, F, Podlaska, A, Li, XN, Varela, R, Astor, Y, Saenz, JP, Rush, D, Damste, JSS, Summons, RE, Scranton, M, Taylor, GT and Hinrichs, KU (2012) Biomarkers, chemistry and microbiology show chemoautotrophy in a multilayer chemocline in the Cariaco Basin. Deep Sea Research Part I: Oceanographic Research Papers, 63. 133-156. doi:10.1016/j.dsr.2012.01.005

62

Fink, HG, Wienberg, C, Hebbeln, D, McGregor, HV, Schmiedl, G, Taviani, M and Freiwald, A (2012) Oxygen control on Holocene cold-water coral development in the eastern Mediterranean Sea. Deep Sea Research Part I: Oceanographic Research Papers, 62. 89-96. doi:10.1016/j.dsr.2011.12.013

Panteleit, B, Hamer, K, Kringel, R, Kessels, W and Schulz, HD (2011) Geochemical processes in the saltwater-freshwater transition zone: comparing results of a sand tank experiment with field data. Environmental Earth Sciences, 62(1). 77-91. doi:10.1007/s12665-010-0499-1

Sun, S, Meyer, VD, Dolman, AM, Winterfeld, M, Hefter, J, Dummann, W, McIntyre, C, Montluçon, DB, Haghipour, N, Wacker, L, Gentz, T, van der Voort, TS, Eglinton, TI and Mollenhauer, G (2020) 14C blank assessment in small-scale compound-specific radiocarbon analysis of lipid biomarkers and lignin phenols. Radiocarbon, 62(1). 207-218. doi:10.1017/RDC.2019.108

611

Scheschonk, L, Becker, S, Hehemann, JH, Diehl, N, Karsten, U and Bischof, K (2019) Arctic kelp eco-physiology during the polar night in the face of global warming: a crucial role for laminarin. Marine Ecology Progress Series, 611. 59-74. doi:10.3354/meps12860

61

Alonso, C, Gomez-Pereira, PR, Ramette, A, Ortega, L, Fuchs, BM and Amann, R (2010) Multilevel analysis of the bacterial diversity along the environmental gradient Rio de la Plata-South Atlantic Ocean. Aquatic Microbial Ecology, 61(1). 57-72. doi:10.3354/ame01439

Becker, KW, Lipp, JS, Zhu, C, Liu, XL and Hinrichs, KU (2013) An improved method for the analysis of archaeal and bacterial ether core lipids. Organic Geochemistry, 61. 34-44. doi:10.1016/j.orggeochem.2013.05.007

Belcher, A, Iversen, MH, Manno, C, Henson, SA, Tarling, GA and Sanders, R (2016) The role of particle associated microbes in remineralization of fecal pellets in the upper mesopelagic of the Scotia Sea, Antarctica. Limnology and Oceanography, 61(3). 1049-1064. doi:10.1002/lno.10269

Ionescu, C, Fischer, C, Hoeck, V and Lüttge, A (2018) Discrimination of ceramic surface finishing by vertical scanning interferometry. Archaeometry, 61(1). 31-42. doi:10.1111/arcm.12410

Marchant, HK, Holtappels, M, Lavik, G, Ahmerkamp, S, Winter, C and Kuypers, MMM (2016) Coupled nitrification-denitrification leads to extensive N loss in subtidal permeable sediments. Limnology and Oceanography, 61(3). 1033-1048. doi:10.1002/lno.10271

Perner, M, Küver, J, Seifert, R, Pape, T, Koschinsky, A, Schmidt, K, Strauss, H and Imhoff, JF (2007) The influence of ultramafic rocks on microbial communities at the Logatchev hydrothermal field, located 15°N on the Mid-Atlantic Ridge. FEMS Microbiologyl Ecology, 61. 97-109. doi:10.1111/j.1574-6941.2007.00325.x

601

Zhou, Z, Zhang, C, Liu, P, Fu, L, Laso-Pérez, R, Yang, L, Bai, L, Li, J, Yang, M, Lin, J, Wang, W, Wegener, G, Li, M and Cheng, L (2022) Non-syntrophic methanogenic hydrocarbon degradation by an archaeal species. Nature, 601(7892). 257-262. doi:10.1038/s41586-021-04235-2

60

Perevalova, AA, Bidzhieva, SK, Kublanov, IV, Hinrichs, KU, Liu, XL, Mardanov, AV, Lebedinsky, AV and Bonch-Osmolovskaya, EA (2010) Fervidococcus fontis gen. nov., sp.nov., an anaerobic, thermophilic crenarchaeote from terrestrial hot springs, and proposal of Fervidococcaceae fam. nov. and Fervidococcales ord. nov. International Journal of Systematic and Evolutionary Microbiology, 60. 2082-2088. doi:10.1099/kjs.0.019042-0

Teichert, S, Woelkerling, W, Rüggeberg, A, Wisshak, M, Piepenburg, D, Meyerhöfer, M, Form, A and Freiwald, A (2014) Arctic rhodolith beds and their environmental controls (Spitsbergen, Norway). Facies, 60(1). 15-37. doi:10.1007/s10347-013-0372-2

6

Amann, R and Fuchs, BM (2008) Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques. Nature Reviews Microbiology, 6. 339-348. doi:10.1038/nrmicro1888

Bach, W and Früh-Green, GL (2010) Alteration of the Oceanic Lithosphere and Implications for Seafloor Processes. Elements, 6(3). 173-178. doi:10.2113/gselements.6.3.173

Bayon, G, Dupré, S, Ponzevera, E, Etoubleau, J, Chéron, S, Pierre, C, Mascle, J, Boetius, A and de Lange, GJ (2013) Formation of carbonate chimneys in the Mediterranean Sea linked to deep-water oxygen depletion. Nature Geoscience, 6(9). 755-760. doi:10.1038/NGEO1888

Beinart, RA, Nyholm, SV, Dubilier, N and Girguis, PR (2014) Intracellular Oceanospirillales inhabit the gills of the hydrothermal vent snail Alviniconcha with chemosynthetic, γ-Proteobacterial symbionts. Environmental Microbiology Reports, 6(6). 656-664. doi:10.1111/1758-2229.12183

Biddle, JF, Cardman, Z, Mendlovitz, H, Albert, DB, Lloyd, KG, Boetius, A and Teske, AP (2012) Anaerobic oxidation of methane at different temperature regimes in Guaymas Basin hydrothermal sediments. Isme Journal, 6(5). 1018-1031. doi:10.1038/ismej.2011.164

Bienhold, C, Boetius, A and Ramette, A (2012) The energy-diversity relationship of complex bacterial communities in Arctic deep-sea sediments. Isme Journal, 6(4). 724-732. doi:10.1038/ismej.2011.140

Bissett, A, Neu, TR and de Beer, D (2011) Dissolution of calcite in the twilight zone: bacterial control of dissolution of sinking planktonic carbonates is unlikely. PLoS ONE, 6(11). doi:10.1371/journal.pone.0026404

Boetius, A and Wenzhöfer, F (2013) Seafloor oxygen consumption fuelled by methane from cold seeps. Nature Geoscience, 6(9). 725-734. doi:10.1038/NGEO1926

Bracher, A, Vountas, M, Dinter, T, Burrows, JP, Röttgers, R and Peeken, I (2009) Quantitative observation of cyanobacteria and diatoms from space using PhytoDOAS on SCIAMACHY data. Biogeosciences, 6. 751-764. doi:10.5194/bg-6-751-2009

Christiansen, B, Bühring, S, Pfannkuche, O and Weikert, H (2010) The near-bottom plankton community at the Porcupine Abyssal Plain, NE-Atlantic: structure and vertical distribution. Marine Biology Research, 6(2). 113-124. doi:10.1080/17451000903150363

Dubilier, N, Bergin, C and Lott, C (2008) Symbiotic diversity in marine animals: the art of harnessing chemosynthesis. Nature Reviews Microbiology, 6. 725-740. doi:10.1038/nrmicro1992

Fischer, D, Mogollón, JM, Strasser, M, Pape, T, Bohrmann, G, Fekete, N, Spiess, V and Kasten, S (2013) Subduction zone earthquake as potential trigger of submarine hydrocarbon seepage. Nature Geoscience, 6(8). 647-651. doi:10.1038/ngeo1886 PANGAEA Supplementary Data

Fischer, G and Karakas, G (2009) Sinking rates and ballast composition of particles in the Atlantic Ocean: implications for the organic carbon fluxes to the deep ocean. Biogeosciences, 6. 85-102. doi:10.5194/bg-6-85-2009 PANGAEA Supplementary Data

Füssel, J, Lavik, G, Jensen, MM, Holtappels, M, Günter, M and Kuypers, MMM (2012) Nitrite oxidation in the Namibian oxygen minimum zone. Isme Journal, 6(6). 1200-12090. doi:10.1038/ismej.2011.178

Giering, SLC, Cavan, EL, Basedow, SL, Briggs, N, Burd, AB, Darroch, LJ, Guidi, L, Irisson, JO, Iversen, MH, Kiko, R, Lindsay, D, Marcolin, CR, McDonnell, AMP, Möller, KO, Passow, U, Thomalla, S, Trull, TW and Waite, AM (2020) Sinking organic particles in the ocean—flux estimates from in situ optical devices. Frontiers in Marine Science, 6. doi:10.3389/fmars.2019.00834

Glud, RN, Wenzhöfer, F, Middelboe, M, Oguri, K, Turnewitsch, R, Canfield, DE and Kitazato, H (2013) High rates of microbial carbon turnover in sediments in the deepest oceanic trench on Earth. Nature Geoscience, 6(4). 284-288. doi:10.1038/ngeo1773

Gobet, A, Böer, SI, Huse, SM, van Beusekom, J, Quince, C, Sogin, ML, Boetius, A and Ramette, A (2012) Diversity and dynamics of rare and of resident bacterial populations in coastal sands. Isme Journal, 6(3). 542-553. doi:10.1038/ismej.2011.132

Gros, V, Peeken, I, Bluhm, K, Zoellner, E, Sarda-Esteve, R and Bonsang, B (2009) Carbon monoxide emissions by phytoplankton: evidence from laboratory experiments. Environmental Chemistry, 6. 369-379. doi:10.1071/EN09020

Himmler, T, Bayon, G, Wangner, D, Enzmann, F, Peckmann, JL and Bohrmann, G (2016) Seep-carbonate lamination controlled by cyclic particle flux. Scientific Reports, 6. 37439. doi:10.1038/srep37439 PANGAEA Supplementary Data

Hori, T, Aoyagi, T, Itoh, H, Narihiro, T, Oikawa, A, Suzuki, K, Ogata, A, Friedrich, MW, Conrad, R and Kamagata, Y (2015) Isolation of microorganisms involved in reduction of crystalline iron(III) oxides in natural environments. Frontiers in Microbiology, 6. doi:10.3389/fmicb.2015.00386

Hügler, M, Petersen, JM, Dubilier, N, Imhoff, JF and Sievert, SM (2011) Pathways of carbon and energy metabolism of the epibiotic community associated with the deep-sea hydrothermal vent shrimp Rimicaris exoculata. PLoS ONE, 6. doi: 10.1371/journal.pone.0016018

Kalvelage, T, Jensen, MM, Contreras, S, Revsbech, NP, Lam, P, Günter, M, LaRoche, J, Lavik, G and Kuypers, MMM (2011) Oxygen sensitivity of Anammox and coupled N-cycle processes in oxygen minimum zones. PLoS ONE, 6(12). doi:10.1371/journal.pone.0029299

Lombard, F, Boss, E, Waite, AM, Vogt, M, Uitz, J, Stemmann, L, Sosik, HM, Schulz, J, Romagnan, JB, Picheral, M, Pearlman, J, Ohman, MD, Niehoff, B, Möller, KO, Miloslavich, P, Lara-Lopez, A, Kudela, R, Lopes, RM, Kiko, R, Karp-Boss, L, Jaffe, JS, Iversen, MH, Irisson, JO, Fennel, K, Hauss, H, Guidi, L, Gorsky, G, Giering, SLC, Gaube, P, Gallager, S, Dubelaar, G, Cowen, RK, Carlotti, F, Briseño-Avena, C, Berline, L, Benoit-Bird, K, Bax, N, Batten, S, Ayata, SD, Artigas, LF and Appeltans, W (2019) Globally consistent quantitative observations of planktonic ecosystems. Frontiers in Marine Science, 6. doi:10.3389/fmars.2019.00196

Marcon, Y and Purser, A (2017) PAPARA(ZZ)I : An open-source software interface for annotating photographs of the deep-sea. SoftwareX, 6. 69-80. doi:10.1016/j.softx.2017.02.002

Niemann, H, Fischer, D, Graffe, D, Knittel, K, Montiel, A, Heilmayer, O, Nöthen, K, Pape, T, Kasten, S, Bohrmann, G, Boetius, A and Gutt, J (2009) Biogeochemistry of a low-activity cold seep in the Larsen B area, western Weddell Sea, Antarctica. Biogeosciences, 6. 2383-2395. doi:10.5194/bg-6-2383-2009 PANGAEA Supplementary Data

Oni, OE, Schmidt, F, Miyatake, T, Kasten, S, Witt, M, Hinrichs, KU and Friedrich, MW (2015) Microbial communities and organic matter composition in surface and subsurface sediments of the Helgoland mud area, North Sea. Frontiers in Microbiology, 6. doi:10.3389/fmicb.2015.01290 PANGAEA Supplementary Data

Pearlman, J, Bushnell, M, Coppola, L, Karstensen, J, Buttigieg, PL, Pearlman, F, Simpson, P, Barbier, M, Muller-Karger, FE, Munoz-Mas, C, Pissierssens, P, Chandler, C, Hermes, J, Heslop, E, Jenkyns, R, Achterberg, EP, Bensi, M, Bittig, HC, Blandin, J, Bosch, J, Bourles, B, Bozzano, R, Buck, JJH, Burger, EF, Cano, D, Cardin, V, Llorens, MC, Cianca, A, Chen, H, Cusack, C, Delory, E, Garello, R, Giovanetti, G, Harscoat, V, Hartman, S, Heitsenrether, R, Jirka, S, Lara-Lopez, A, Lantéri, N, Leadbetter, A, Manzella, G, Maso, J, McCurdy, A, Moussat, E, Ntoumas, M, Pensieri, S, Petihakis, G, Pinardi, N, Pouliquen, S, Przeslawski, R, Roden, NP, Silke, J, Tamburri, MN, Tang, H, Tanhua, T, Telszewski, M, Testor, P, Thomas, J, Waldmann, C and Whoriskey, F (2019) Evolving and sustaining ocean best practices and standards for the next decade. Frontiers in Marine Science, 6. doi:10.3389/fmars.2019.00277

Peckmann, JL, Bach, W, Behrens, K and Reitner, J (2008) Putative cryptoendolithic life in Devonian pillow basalt, Rheinisches Schiefergebirge, Germany. Geobiology, 6(2). 125-135. doi:10.1111/j.1472-4669.2007.00131.x

Römer, M, Hsu, CW, Loher, M, MacDonald, IR, dos Santos Ferreira, C, Pape, T, Mau, S, Bohrmann, G and Sahling, H (2019) Amount and fate of gas and oil discharged at 3400 m water depth from a natural seep site in the southern Gulf of Mexico. Frontiers in Marine Science, 6. doi:10.3389/fmars.2019.00700

Schubert, CJ, Niggemann, J, Klockgether, G and Ferdelman, TG (2005) Chlorin Index: A new parameter for organic matter freshness in sediments. Geochemistry Geophysics Geosystems, 6. Q03005. doi:10.1029/2004GC000837

Segarra, KEA, Schubotz, F, Samarkin, V, Yoshinaga, MY, Hinrichs, KU and Joye, SB (2015) High rates of anaerobic methane oxidation in freshwater wetlands reduce potential atmospheric methane emissions. Nature Communications, 6. 7477. doi:10.1038/ncomms8477

Seifert, M, Hoppema, M, Burau, C, Elmer, C, Friedrichs, A, Geuer, JK, John, U, Kanzow, T, Koch, BP, Konrad, C, Van der Jagt, H, Zielinski, O and Iversen, MH (2019) Influence of glacial meltwater on summer biogeochemical cycles in Scoresby Sund, East Greenland. Frontiers in Marine Science, 6. doi:10.3389/fmars.2019.00412

Serrano, W, Tarazona, UI, Olaechea, RM and Friedrich, MW (2018) Draft genome sequence of a new Vibrio strain with the potential to produce bacteriocin-like inhibitory substances, isolated from the gut microflora of scallop (Argopecten purpuratus). Genome Announcements, 6(20). doi:10.1128/genomeA.00419-18

Sogin, EM, Michellod, D, Gruber-Vodicka, HR, Bourceau, P, Geier, B, Meier, DV, Seidel, M, Ahmerkamp, S, Schorn, S, D’Angelo, G, Procaccini, G, Dubilier, N and Liebeke, M (2022) Sugars dominate the seagrass rhizosphere. Nature Ecology & Evolution, 6(7). 866-877. doi:10.1038/s41559-022-01740-z

Stagars, MH, Ruff, SE, Amann, R and Knittel, K (2016) High diversity of anaerobic alkane-degrading microbial communities in marine seep sediments based on (1-methylalkyl)succinate synthase genes. Frontiers in Microbiology, 6. doi:10.3389/fmicb.2015.01511

Thomanek, K, Zielinski, O, Sahling, H and Bohrmann, G (2010) Automated gas bubble imaging at sea floor - a new method of in situ gas flux quantification. Ocean Science, 6. 549-562. doi:10.5194/os-6-549-2010

Wegener, G and Boetius, A (2009) An experimental study on short-term changes in the anaerobic oxidation of methane in response to varying methane and sulfate fluxes. Biogeosciences, 6(5). 867-876. doi:10.5194/bg-6-867-2009

Wendeberg, A, Zielinski, FU, Borowski, C and Dubilier, N (2011) Expression patterns of mRNAs for methanotrophy and thiotrophy in symbionts of the hydrothermal vent mussel Bathymodiolus puteoserpentis. Isme Journal, 6. 104-112. doi:10.1038/ismej.2011.81

Wieland, A, Pape, T, Möbius, J, Klock, JH and Michaelis, W (2008) Carbon pools and isotopic trends in a hypersaline cyanobacterial mat (Salin-de-Giraud, France). Geobiology, 6. 171-186. doi:10.1111/j.1472-4669.2007.00138.x PANGAEA Supplementary Data

Yoshinaga, MY, Gagen, EJ, Wörmer, L, Broda, NK, Meador, TB, Wendt, J, Thomm, M and Hinrichs, KU (2015) Methanothermobacter thermautotrophicus modulates its membrane lipids in response to hydrogen and nutrient availability. Frontiers in Microbiology, 6. doi:10.3389/fmicb.2015.00005

Zinger, L, Amaral-Zettler, LA, Fuhrman, JA, Horner-Devine, MC, Huse, SM, Welch, DBM, Martiny, JBH, Sogin, ML, Boetius, A and Ramette, A (2011) Global Patterns of Bacterial Beta-Diversity in Seafloor and Seawater Ecosystems. PLoS ONE, 6(9). e24570. doi:10.1371/journal.pone.0024570

595

Krake, N, Birgel, D, Smrzka, D, Zwicker, J, Huang, H, Feng, D, Bohrmann, G and Peckmann, J (2022) Molecular and isotopic signatures of oil-driven bacterial sulfate reduction at seeps in the southern Gulf of Mexico. Chemical Geology, 595. 120797. doi:10.1016/j.chemgeo.2022.120797

59

Wei, J, Pape, T, Sultan, N, Colliat, JL, Himmler, T, Ruffine, L, De Prunelé, A, Dennielou, B, Garziglia, S, Marsset, T, Peters, CA, Rabiu, A and Bohrmann, G (2015) Gas hydrate distributions in sediments of pockmarks from the Nigerian margin – Results and interpretation from shallow drilling. Marine and Petroleum Geology, 59. 359-370. doi:10.1016/j.marpetgeo.2014.09.013 PANGAEA Supplementary Data

Wägele, JW, Bodesheim, P, Bourlat, SJ, Denzler, J, Diepenbroek, M, Fonseca, V, Frommolt, KH, Geiger, MF, Gemeinholzer, B, Glöckner, FO, Haucke, T, Kirse, A, Kölpin, A, Kostadinov, I, Kühl, HS, Kurth, F, Lasseck, M, Liedke, S, Losch, F, Müller, S, Petrovskaya, N, Piotrowski, K, Radig, B, Scherber, C, Schoppmann, L, Schulz, J, Steinhage, V, Tschan, GF, Vautz, W, Velotto, D, Weigend, M and Wildermann, S (2022) Towards a multisensor station for automated biodiversity monitoring. Basic and Applied Ecology, 59. 105-138. doi:10.1016/j.baae.2022.01.003

Wörmer, L, Lipp, JS, Schröder, JM and Hinrichs, KU (2013) Application of two new LC–ESI–MS methods for improved detection of intact polar lipids (IPLs) in environmental samples. Organic Geochemistry, 59. 10-21. doi:10.1016/j.orggeochem.2013.03.004

Xie, S, Lazar, CS, Lin, YS, Teske, A and Hinrichs, KU (2013) Ethane- and propane-producing potential and molecular characterization of an ethanogenic enrichment in an anoxic estuarine sediment. Organic Geochemistry, 59. 37-48. doi:10.1016/j.orggeochem.2013.03.001

58

Brandt, A, Bathmann, U, Brix, S, Cisewski, B, Flores, H, Göcke, C, Janussen, D, Krägefsky, S, Kruse, S, Leach, H, Linse, K, Pakhomov, EA, Peeken, I, Riehl, T, Sauter, EJ, Sachs, O, Schüller, M, Schrödl, M, Schwabe, E, Strass, VH, van Franeker, JA and Wilmsen, M (2011) Maud Rise - a snapshot through the water column. Deep Sea Research Part II: Topical Studies in Oceanography, 58(19-20). 1962-1982. doi:10.1016/j.dsr2.2011.01.008 PANGAEA Supplementary Data

Graeber, I, Kaesler, I, Borchert, MS, Dieckmann, R, Pape, T, Lurz, R, Nielsen, P, von Döhren, H, Michaelis, W and Szewzyk, U (2008) Spongiibacter marinus gen. nov., sp. nov., a novel halophilic marine bacterium isolated from the boreal sponge Haliclona sp.1. International Journal of Systematic and Evolutionary Microbiology, 58. 585-590. doi:10.1099/ijs.0.65438-0

Holmkvist, L, Kamyshny, A, Vogt, C, Vamvakopoulos, K, Ferdelman, TG and Jørgensen, BB (2011) Sulfate reduction below the sulfate-methane transition in Black Sea sediments. Deep Sea Research Part I: Oceanographic Research Papers, 58(5). 493-504. doi:10.1016/j.dsr.2011.02.009

Kaesler, I, Graeber, I, Borchert, MS, Pape, T, Dieckmann, R, von Döhren, H, Nielsen, P, Lurz, R, Michaelis, W and Szewzyk, U (2008) Spongiispira norvegica gen. nov., sp. nov., a novel marine bacterium isolated from the boreal sponge Isops phlegraei. International Journal of Systematic and Evolutionary Microbiology, 58. 1815-1820. doi:10.1099/ijs.0.65439-0

Veit-Köhler, G, Guilini, K, Peeken, I, Sachs, O, Sauter, EJ and Würzberg, L (2011) Antarctic deep-sea meiofauna and bacteria react to the deposition of particulate organic matter after a phytoplankton bloom. Deep Sea Research Part II: Topical Studies in Oceanography, 58(19-20). 1983-1995. doi:10.1016/j.dsr2.2011.05.008 PANGAEA Supplementary Data

579

Li, J, Mara, P, Schubotz, F, Sylvan, JB, Burgaud, G, Klein, F, Beaudoin, D, Wee, SY, Dick, HJB, Lott, S, Cox, R, Meyer, LAE, Quémener, M, Blackman, DK and Edgcomb, VP (2020) Recycling and metabolic flexibility dictate life in the lower oceanic crust. Nature, 579(7798). 250-255. doi:10.1038/s41586-020-2075-5

570

Jonkers, L, Hillebrand, H and Kucera, M (2019) Global change drives modern plankton communities away from the pre-industrial state. Nature, 570(7761). 372-375. doi:10.1038/s41586-019-1230-3

57

Feng, D, Roberts, HH, Cheng, H, Peckmann, JL, Bohrmann, G, Edwards, RL and Chen, D (2010) U/Th dating of cold-seep carbonates: An initial comparison. Deep Sea Research Part II: Topical Studies in Oceanography, 57(21-23). 2055-2060. doi:10.1016/j.dsr2.2010.09.004

Gao, H, Matyka, M, Liu, B, Khalili, A, Kostka, JE, Collins, G, Jansen, S, Holtappels, M, Jensen, MM, Badewien, TH, Beck, M, Grunwald, M, de Beer, D, Lavik, G and Kuypers, MMM (2012) Intensive and extensive nitrogen loss from intertidal permeable sediments of the Wadden Sea. Limnology and Oceanography, 57(1). 185-198. doi:10.4319/lo.2012.57.1.0185

Helmke, P, Neuer, S, Lomas, MW, Conte, M and Freudenthal, T (2010) Cross-basin differences in particulate organic carbon export and flux attenuation in the subtropical North Atlantic gyre. Deep Sea Research Part I: Oceanographic Research Papers, 57(2). 213-227. doi:10.1016/j.dsr.2009.11.001

Iversen, MH, Nowald, N, Ploug, H, Jackson, GA and Fischer, G (2010) High resolution profiles of vertical particulate organic matter export off Cape Blanc, Mauritania: Degradation processes and ballasting effects. Deep Sea Research Part I: Oceanographic Research Papers, 57(6). 771-784. doi:10.1016/j.dsr.2010.03.007 PANGAEA Supplementary Data

Orcutt, BN, Joye, SB, Kleindienst, S, Knittel, K, Ramette, A, Reitz, A, Samarkin, VA, Treude, T and Boetius, A (2010) Impact of natural oil and higher hydrocarbons on microbial diversity, distribution, and activity in Gulf of Mexico cold-seep sediments. Deep Sea Research Part II: Topical Studies in Oceanography, 57(21-23). 2008-2021. doi:10.1016/j.dsr2.2010.05.014

Walter, M, Mertens, C, Stöber, U, German, CR, Yoerger, D, Sültenfuß, J, Rhein, M, Melchert, B and Baker, ET (2010) Rapid dispersal of a hydrothermal plume by turbulent mixing. Deep Sea Research Part I: Oceanographic Research Papers, 57(8). 931-945. doi:10.1016/j.dsr.2010.04.010

Wörmer, L, Cirés, S, Velázquez, D, Quesada, A and Hinrichs, KU (2012) Cyanobacterial heterocyst glycolipids in cultures and environmental samples: Diversity and biomarker potential. Limnology and Oceanography, 57(6). 1775-1788. doi:10.4319/lo.2012.57.6.1775

Ziegenbalg, SB, Berthold, C, Kappler, A and Peckmann, JL (2011) Gypsum whiskers in Messinian evaporites identified by mu-XRD2. Facies, 57(2). 249-253. doi:10.1007/s10347-010-0237-x

56

Beier, C, Bach, W, Turner, S, Niedermeier, D, Woodhead, J, Erzinger, J and Krumm, S (2015) Origin of silicic magmas at spreading centres - an example from the South East Rift, Manus Basin. Journal of Petrology, 56(2). 255-272. doi:10.1093/petrology/egu077 PANGAEA Supplementary Data

Cambon-Bonavita, MA, Nadalig, T, Roussel, E, Delage, E, Duperron, S, Caprais, JC, Boetius, A and Sibuet, M (2009) Diversity and distribution of methane-oxidizing microbial communities associated with different faunal assemblages in a giant pockmark of the Gabon continental margin. Deep Sea Research Part II: Topical Studies in Oceanography, 56(23). 2248-2258. doi:10.1016/j.dsr2.2009.04.007

Garrity, C, Ramseier, RO, Peinert, R, Kern, S and Fischer, G (2005) Water column particulate organic carbon modeled in the ice-frequented Southern Ocean. Journal of Marine Systems, 56. 133-149. doi:10.1016/j.jmarsys.2004.09.009

Haas, A, Little, CTS, Sahling, H, Bohrmann, G, Himmler, T and Peckmann, JL (2009) Mineralization of vestimentiferan tubes at methane seeps on the Congo deep-sea fan. Deep Sea Research Part I: Oceanographic Research Papers, 56(2). 283-293. doi:10.1016/j.dsr.2008.08.007 PANGAEA Supplementary Data

Reid, PC, Fischer, AC, Lewis-Brown, E, Meredith, MP, Sparrow, M, Andersson, AJ, Antia, AN, Bates, NR, Bathmann, U, Beaugrand, G, Brix, H, Dye, S, Edwards, M, Furevik, T, Gangstø, R, Hátún, H, Hopcroft, RR, Kendall, MA, Kasten, S, Keeling, RF, Le Quéré, C, Mackenzie, FT, Malin, G, Mauritzen, C, Olafsson, J, Paull, CK, Rignot, E, Shimada, K, Vogt, M, Wallace, C, Wang, Z and Washington, R (2009) Impacts of the oceans on climate change. Advances in Marine Biology, 56. 1-150. doi:10.1016/S0065-2881(09)56001-4

Wilken, S, Hoffmann, B, Hersch, N, Kirchgeßner, N, Dielluweit, S, Rubner, W, Hoffmann, L, Merkel, R and Peeken, I (2011) Diatom frustules show increased mechanical strength and altered valve morphology under iron limitation. Limnology and Oceanography, 56(4). 1399-1410. doi:10.4319/lo.2011.56.4.1399

Zhu, C, Talbot, HM, Wagner, T, Pan, JM and Pancost, RD (2011) Distribution of hopanoids along a land to sea transect: Implications for microbial ecology and the use of hopanoids in environmental studies. Limnology and Oceanography, 56(5). 1850-1865. doi:10.4319/lo.2011.56.5.1850

558

Hu, Y, Feng, D, Peng, Y, Peckmann, J, Kasten, S, Wang, X, Liang, Q, Wang, H and Chen, D (2020) A prominent isotopic fingerprint of nitrogen uptake by anaerobic methanotrophic archaea. Chemical Geology, 558. 119972. doi:10.1016/j.chemgeo.2020.119972

55

Abegg, F, Hohnberg, HJ, Pape, T, Bohrmann, G and Freitag, J (2008) Development and application of pressure-core-sampling systems for the investigation of gas- and gas-hydrate-bearing sediments. Deep Sea Research Part I: Oceanographic Research Papers, 55(11). 1590-1599. doi:10.1016/j.dsr.2008.06.006 PANGAEA Supplementary Data

Felden, J, Wenzhöfer, F, Feseker, T and Boetius, A (2010) Transport and consumption of oxygen and methane in different habitats of the Hakon Mosby Mud Volcano (HMMV). Limnology and Oceanography, 55(6). 2366-2380. doi:10.4319/lo.2010.55.6.2366 PANGAEA Supplementary Data

Jaeschke, A, Abbas, B, Zabel, M, Hopmans, EC, Schouten, S and Sinninghe Damsté, JS (2010) Molecular evidence for anaerobic ammonium-oxidizing (anammox) bacteria in continental shelf and slope sediments off northwest Africa. Limnology and Oceanography, 55(1). 365-376. doi:10.4319/lo.2010.55.1.0365 PANGAEA Supplementary Data

Jørgensen, BB and Parkes, RJ (2010) Role of sulfate reduction and methane production by organic carbon degradation in eutrophic fjord sediments (Limfjorden, Denmark). Limnology and Oceanography, 55(3). 1338-1352. doi:10.4319/lo.2010.55.3.1338

Lichtschlag, A, Felden, J, Brüchert, V, Boetius, A and de Beer, D (2010) Geochemical processes and chemosynthetic primary production in different thiotrophic mats of the Hakon Mosby Mud Volcano (Barents Sea). Limnology and Oceanography, 55(2). 931-949. doi:10.4319/lo.2010.55.2.0931 PANGAEA Supplementary Data

548

Brocks, JJ, Jarrett, AJM, Sirantoine, E, Hallmann, C, Hoshino, Y and Liyanage, T (2017) The rise of algae in Cryogenian oceans and the emergence of animals. Nature, 548(7669). 578-581. doi:10.1038/nature23457

541

Luo, M, Torres, ME, Hong, WL, Pape, T, Fronzek, J, Kutterolf, S, Mountjoy, JJ, Orpin, A, Henkel, S, Huhn, K, Chen, D and Kasten, S (2020) Impact of iron release by volcanic ash alteration on carbon cycling in sediments of the northern Hikurangi margin. Earth and Planetary Science Letters, 541. 116288. doi:10.1016/j.epsl.2020.116288

54

Birkenstock, J, Kleemeier, M, Vogt, C, Wendschuh, M, Hartwig, A and Fischer, RX (2011) Influence of sodium bromide on the thermal decomposition of tetraphenylphosphonium montmorillonite. Applied Clay Science, 54(2). 144-150. doi:10.1016/j.clay.2011.07.021

Stoll, HM, Arevalos, A, Burke, A, Ziveri, P, Mortyn, G, Shimizu, N and Unger, D (2007) Seasonal cycles in biogenic production and export in northern Bay of Bengal sediment traps. Deep Sea Research Part II: Topical Studies in Oceanography, 54(5-7). 558-580. doi:10.1016/j.dsr2.2007.01.002

539

Laso-Pérez, R, Wegener, G, Knittel, K, Widdel, F, Harding, KJ, Krukenberg, V, Meier, DV, Richter, M, Tegetmeyer, HE, Riedel, D, Richnow, HH, Adrian, L, Reemtsma, T, Lechtenfeld, OJ and Musat, F (2016) Thermophilic archaea activate butane via alkyl-coenzyme M formation. Nature, 539(7629). 396-401. doi:10.1038/nature20152

53

Inthorn, M, Mohrholz, V and Zabel, M (2006) Nepheloid layer distribution in the Benguela upwelling area offshore Namibia. Deep Sea Research Part I: Oceanographic Research Papers, 53(8). 1423-1438. doi:10.1016/j.dsr.2006.06.004

Inthorn, M, Rutgers van der Loeff, MM and Zabel, M (2006) A study of particle exchange at the sediment-water interface in the Benguela upwelling area based ibnn 234Th/238U disequilibrium. Deep Sea Research Part I: Oceanographic Research Papers, 53(11). 1742-1761. doi:10.1016/j.dsr.2006.08.004

Ploug, H, Iversen, MH and Fischer, G (2008) Ballast, sinking velocity, and apparent diffusivity within marine snow and fecal pellets: Implications for substrate turnover by attached bacteria. Limnology and Oceanography, 53(5). 1878-1886. doi:10.4319/lo.2008.53.5.1878 PANGAEA Supplementary Data

Ploug, H, Iversen, MH, Koski, M and Buitenhuis, ET (2008) Production, oxygen respiration rates, and sinking velocity of copepod fecal pellets: direct measurements of ballasting by opal and calcite. Limnology and Oceanography, 53(2). 469-476. doi:10.4319/lo.2008.53.2.0469 PANGAEA Supplementary Data

Senowbari-Daryan, B, Gaillard, C and Peckmann, JL (2007) Crustacean microcoprolites from Jurassic (Oxfordian) hydrocarbon-seep deposits of Beauvoisin, southeastern France. Facies, 53. 229-238. doi:10.1007/s10347-006-0096-7

Suresh, G, Melsheimer, C, Körber, JH and Bohrmann, G (2015) Automatic estimation of oil seep locations in synthetic aperture radar images. IEEE Transactions on Geoscience and Remote Sensing, 53(8). 4218-4230. doi:10.1109/TGRS.2015.2393375

Unger, D (2006) Nitrogen isotopic composition of sinking particles from the southern Bay of Bengal: evidence for variable nitrogen sources. Deep Sea Research Part I: Oceanographic Research Papers, 53(10). 1658-1676. doi:10.1016/j.dsr.2006.07.004

526

Dubilier, N, McFall-Ngai, M and Zhao, L (2015) Create a global microbiome effort. Nature, 526(7575). 631-634.

Wegener, G, Krukenberg, V, Riedel, D, Tegetmeyer, HE and Boetius, A (2015) Intercellular wiring enables electron transfer between methanotrophic archaea and bacteria. Nature, 526(7574). 587-590. doi:10.1038/nature15733

52

Keir, R, Greinert, J, Petrick, G, Rhein, M, Fürhaupter, K and Sültenfuß, J (2005) Methane and methane carbon isotope ratios in the Northeast Atlantic including the Mid-Atlantic Ridge (50°N). Deep Sea Research Part I: Oceanographic Research Papers, 52(6). 1043-1070. doi:10.1016/j.dsr.2004.12.006

Ploug, H and Passow, U (2007) Direct measurements of diffusivity in diatom aggregates containing transparent exopolymer particles. Limnology and Oceanography, 52(1). 1-6. doi:10.4319/lo.2007.52.1.0001

Schüßler, U, Balzer, W and Deeken, A (2005) Dissolved Al distribution, particulate Al fluxes and coupling to atmospheric Al and dust deposition in the Arabian Sea. Deep Sea Research Part II: Topical Studies in Oceanography, 52(14-15). 1862-1878. doi:10.1016/j.dsr2.2005.06.005

Versteegh, GJM and Blokker, P (2004) Resistant macromolecules of extant and fossil microalgae. Phycological Research, 52(4). 325-339. doi:10.1111/j.1440-183.2004.00361.x

Versteegh, GJM, Servais, T, Streng, M, Munnecke, A and Vachard, D (2009) A discussion and proposal concerning calcispheres. Palaeontology, 52(2). 343-348. doi:10.1111/j.1475-4983.2009.00854.x

51

Bar-Or, I, Elvert, M, Eckert, W, Kushmaro, A, Vigderovich, H, Zhu, Q, Ben-Dov, E and Sivan, O (2017) Iron-coupled anaerobic oxidation of methane performed by a mixed bacterial-archaeal community based on poorly reactive minerals. Environmental Science & Technology, 51(21). 12293-12301. doi:10.1021/acs.est.7b03126

Bühring, S, Lampadariou, N, Moodley, L, Tselepides, T and Witte, U (2006) Benthic microbial and whole-community responses to different amounts of 13C-enriched algae: In situ experiments in the deep Cretan Sea (Eastern Mediterranean). Limnology and Oceanography, 51(1). 157-165. doi:10.4319/lo.2006.51.1.0157

Gonzáles, HE, Hebbeln, D, Iriarte, JL and Marchant, M (2004) Downward fluxes of faecal material and microplankton at 2300m depth in the oceanic area off Coquimbo (30°S), Chile during 1993-1995. Deep Sea Research Part II: Topical Studies in Oceanography, 51(20-21). 2457-2474. doi:10.1016/j.dsr2.2004.07.027

Michaelis, M, Fischer, C, Colombi Ciacchi, L and Lüttge, A (2017) Variability of zinc oxide dissolution rates. Environmental Science & Technology, 51(8). 4297-4305. doi:10.1021/acs.est.6b05732

Reitner, J, Peckmann, JL, Schumann, G, Reimer, AL and Thiel, V (2005) Methane-derived carbonate build-ups and associated microbial communties at cold seeps on the lower Crimean shelf (Black Sea). Facies, 51. 66-79. doi:10.1007/s10347-005-0059-4

Seiter, K, Hensen, C, Schröter, J and Zabel, M (2004) Organic carbon content in surface sediments-defining regional provinces. Deep Sea Research Part I: Oceanographic Research Papers, 51(12). 2001-2026. doi:10.1016/j.dsr.2004.06.014 PANGAEA Supplementary Data

504

Lüttge, A, Arvidson, RS, Fischer, C and Kurganskaya, I (2019) Kinetic concepts for quantitative prediction of fluid-solid interactions. Chemical Geology, 504. 216-235. doi:10.1016/j.chemgeo.2018.11.016

Sevilgen, DS, de Beer, D, Al-Handal, AY, Brey, T and Polerecky, L (2014) Oxygen budgets in subtidal arctic (Kongsfjorden, Svalbard) and temperate (Helgoland, North Sea) microphytobenthic communities. Marine Ecology Progress Series, 504. 27-42. doi:10.3354/meps10672

50

Klein, F and Bach, W (2009) Fe-Ni-Co-O-S Phase Relations in Peridotite-Seawater Interactions. Journal of Petrology, 50. 37-59. doi:10.1093/petrology/egn071 PANGAEA Supplementary Data

Koschinsky, A (2016) Sources and forms of trace metals taken up by hydrothermal vent mussels, and possible adaption and mitigation strategies. In: Demina, LL and Galkin, SV (eds.) Trace Metal Biogeochemistry and Ecology of Deep-Sea Hydrothermal Vent Systems. The Handbook of Environmental Chemistry, 50. Springer International Publishing, 97-122. doi:10.1007/698_2016_2

Körber, JH, Sahling, H, Pape, T, dos Santos Ferreira, C, MacDonald, IR and Bohrmann, G (2014) Natural oil seepage at Kobuleti Ridge, eastern Black Sea. Marine and Petroleum Geology, 50. 68-82. doi:10.1016/j.marpetgeo.2013.11.007

Sahling, H, Galkin, SV, Salyuk, A, Greinert, J, Foerstel, H, Piepenburg, D and Suess, E (2003) Depth-related structure and ecological significance of cold-seep communities - A case study from the Sea of Okhotsk. Deep Sea Research Part I: Oceanographic Research Papers, 50(12). 1391-1409. doi:10.1016/j.dsr.2003.08.004 PANGAEA Supplementary Data

Sahling, H, Wallmann, K, Dählmann, A, Schmaljohann, R and Petersen, S (2005) The physicochemical habitat of Sclerolinum sp. at Hook Ridge hydrothermal vent, Bransfield Strait, Antarctica. Limnology and Oceanography, 50(2). 598-606. doi:10.4319/lo.2005.50.2.0598

Sander, SG and Koschinsky, A (2016) The export of iron and other trace metals from hydrothermal vents and the impact on their marine biogeochemical cycle. In: Demina, LL and Galkin, SV (eds.) Trace Metal Biogeochemistry and Ecology of Deep-Sea Hydrothermal Vent Systems. The Handbook of Environmental Chemistry, 50. Springer International Publishing, 9-24. doi:10.1007/698_2016_4

Weinkauf, MFG, Zwick, MM and Kučera, M (2020) Constraining the role of shell porosity in the regulation of shell calcification intensity in the modern planktonic foraminifer Orbulina Universa d'Orbigny. Journal of Foraminiferal Research, 50(2). 195-203. doi:10.2113/gsjfr.50.2.195

5

Aloisi, G, Wallmann, K, Drews, M and Bohrmann, G (2004) Evidence for the submarine weathering of silicate minerals in Black Sea sediments: possible implications for the marine Li and B cycles. Geochemistry Geophysics Geosystems, 5(1). Q04007. doi:10.1029/2003GC000639 PANGAEA Supplementary Data

Bailey, JV, Salman, V, Rouse, GW, Schulz-Vogt, HN, Levin, LA and Orphan, VJ (2011) Dimorphism in methane seep-dwelling ecotypes of the largest known bacteria. Isme Journal, 5(12). 1926-1935. doi:10.1038/ismej.2011.66

Bobrovskiy, I, Hope, JM, Nettersheim, BJ, Volkman, JK, Hallmann, C and Brocks, JJ (2021) Algal origin of sponge sterane biomarkers negates the oldest evidence for animals in the rock record. Nature Ecology & Evolution, 5(2). 165-168. doi:10.1038/s41559-020-01334-7

Brock, J and Schulz-Vogt, HN (2011) Sulfide induces phosphate release from polyphosphate in cultures of a marine Beggiatoa strain. Isme Journal, 5(3). 497-506. doi:10.1038/ismej.2010.135

Brocke, HJ, Wenzhöfer, F, de Beer, D, Mueller, B, van Duyl, FC and Nugues, MM (2015) High dissolved organic carbon release by benthic cyanobacterial mats in a Caribbean reef ecosystem. Scientific Reports, 5. 8852. doi:10.1038/srep08852

Damm, E, Rudels, B, Schauer, U, Mau, S and Dieckmann, G (2015) Methane excess in Arctic surface water- triggered by sea ice formation and melting. Scientific Reports, 5. 16179. doi:10.1038/srep16179

Edwards, KJ, Glazer, BT, Rouxel, OJ, Bach, W, Emerson, D, Davis, RE, Toner, BM, Chan, CS, Tebo, BM, Staudigel, H and Moyer, CL (2011) Ultra-diffuse hydrothermal venting supports, Fe-oxidizing bacteria and massive umber deposition at 5000m off Hawai'i. Isme Journal, 5. doi:10.1038/ismej.2011.48

Foster, RA, Kuypers, MMM, Vagner, T, Paerl, RW, Musat, N and Zehr, JP (2011) Nitrogen fixation and transfer in open ocean diatom-cyanobacterial symbioses. Isme Journal, 5(9). 1484-1493. doi:10.1038/ismej.2011.26

Gärdes, A, Iversen, MH, Grossart, HP, Passow, U and Ullrich, MS (2011) Diatom-associated bacteria are required for aggregation of Thalassiosira weissflogii. Isme Journal, 5(3). 436-445. doi:10.1038/ismej.2010.145 PANGAEA Supplementary Data

Himmler, T, Sahy, D, Martma, T, Bohrmann, G, Plaza-Faverola, A, Bünz, S, Condon, DJ, Knies, J and Lepland, A (2019) A 160,000-year-old history of tectonically controlled methane seepage in the Arctic. Science Advances, 5(8). eaaw1450. doi:10.1126/sciadv.aaw1450

Holler, T, Widdel, F, Knittel, K, Amann, R, Kellermann, MY, Hinrichs, KU, Teske, AP, Boetius, A and Wegener, G (2011) Thermophilic anaerobic oxidation of methane by marine microbial consortia. Isme Journal, 5(12). 1946-1956. doi:10.1038/ismej.2011.77

Ionescu, D, Bizic-Ionescu, M, Khalili, A, Malekmohammadi, R, Morad, MR, de Beer, D and Grossart, HP (2015) A new tool for long-term studies of POM-bacteria interactions: overcoming the century-old Bottle Effect. Scientific Reports, 5. 14706. doi:10.1038/srep14706

Ionescu, D, Buchmann, B, Heim, C, Häusler, S, de Beer, D and Polerecky, L (2014) Oxygenic photosynthesis as a protection mechanism for cyanobacteria against iron-encrustation in environments with high Fe2+ concentrations. Frontiers in Microbiology, 5. doi:10.3389/fmicb.2014.00459

Jensen, MM, Lam, P, Revsbech, NP, Nagel, B, Gaye, B, Jetten, MSM and Kuypers, MMM (2011) Intensive nitrogen loss over the Omani Shelf due to anammox coupled with dissimilatory nitrite reduction to ammonium. Isme Journal, 5(10). 1660-1670. doi:10.1038/ismej.2011.44

Jørgensen, BB and Boetius, A (2007) Feast and famine - microbial life in the deep-sea bed. Nature Reviews Microbiology, 5. 770-781. doi:10.1038/nrmicro1745

Krylova, EM and Sahling, H (2010) Vesicomyidae (Bivalvia): Current Taxonomy and Distribution. PLoS ONE, 5(4). e9957. doi:10.1371/journal.pone.0009957

Kurganskaya, I and Lüttge, A (2021) Mineral dissolution kinetics: Pathways to equilibrium. ACS Earth and Space Chemistry, 5(7). 1657-1673. doi:10.1021/acsearthspacechem.1c00017

Madden, P, Al-Raei, AM, Enright, AM, Chinalia, FA, de Beer, D, O'Flaherty, V and Collins, G (2014) Effect of sulfate on low-temperature anaerobic digestion. Frontiers in Microbiology, 5. doi:10.3389/fmicb.2014.00376

Meador, TB, Gagen, EJ, Loscar, ME, Goldhammer, T, Yoshinaga, MY, Wendt, J, Thomm, M and Hinrichs, KU (2014) Thermococcus kodakarensis modulates its polar membrane lipids and elemental composition according to growth stage and phosphate availability. Frontiers in Microbiology, 5. doi:10.3389/fmicb.2014.00010 PANGAEA Supplementary Data

Moriceau, B, Iversen, MH, Gallinari, M, Evertsen, AJO, Le Goff, M, Beker, B, Boutorh, J, Corvaisier, R, Coffineau, N, Donval, A, Giering, SLC, Koski, M, Lambert, C, Lampitt, RS, Le Mercier, A, Masson, A, Stibor, H, Stockenreiter, M and De La Rocha, CL (2018) Copepods boost the production but reduce the carbon export efficiency by diatoms. Frontiers in Marine Science, 5. doi:10.3389/fmars.2018.00082

Orcutt, BN, Bach, W, Becker, K, Fisher, AT, Hentscher, M, Toner, BM, Wheat, CG and Edwards, KJ (2011) Colonization of subsurface microbial observatories deployed in young ocean crust. Isme Journal, 5(4). 692-703. doi:10.1038/ismej.2010.157

Paul, SAL, Gaye, B, Haeckel, M, Kasten, S and Koschinsky, A (2018) Biogeochemical regeneration of a nodule mining fisturbance Site: Trace Metals, DOC and Amino Acids in Deep-Sea Sediments and Pore Waters. Frontiers in Marine Science, 5. doi:10.3389/fmars.2018.00117 PANGAEA Supplementary Data

Picard, A, Testemale, D, Wagenknecht, L, Hazael, R and Daniel, I (2015) Iron reduction by the deep-sea bacterium Shewanella profunda LT13a under subsurface pressure and temperature conditions. Frontiers in Microbiology, 5. doi:10.3389/fmicb.2014.00796

Ploug, H, Adam, B, Musat, N, Kalvelage, T, Lavik, G, Wolf-Gladrow, D and Kuypers, MMM (2011) Carbon, nitrogen and O(2) fluxes associated with the cyanobacterium Nodularia spumigena in the Baltic Sea. Isme Journal, 5(9). 1549-1558. doi:10.1038/ismej.2011.20

Probst, AJ, Weinmaier, T, Raymann, K, Perras, A, Emerson, JB, Rattei, T, Wanner, G, Klingl, A, Berg, IA, Yoshinaga, MY, Viehweger, B, Hinrichs, KU, Thomas, BC, Meck, S, Auerbach, AK, Heise, M, Schintlmeister, A, Schmid, M, Wagner, M, Gribaldo, S, Banfield, JF and Moissl-Eichinger, C (2014) Biology of a widespread uncultivated archaeon that contributes to carbon fixation in the subsurface. Nature Communications, 5. 5497. doi:10.1038/ncomms6497

Riedinger, N, Brunner, B, Krastel, S, Arnold, GL, Wehrmann, LM, Formolo, MJ, Beck, A, Bates, SM, Henkel, S, Kasten, S and Lyons, TW (2017) Sulfur cycling in an iron oxide-dominated, dynamic marine depositional system: the Argentine continental margin. Frontiers in Earth Science, 5. doi:10.3389/feart.2017.00033 PANGAEA Supplementary Data

Serrano, W, Tarazona, UI, Olaechea, RM and Friedrich, MW (2017) Draft genome sequence of Vibrio sp. strain V1B isolated from the gut microflora of the scallop Argopecten purpuratus. Genome Announcements, 5(42). doi:10.1128/genomeA.01130-17

Suresh, G, Melsheimer, C, MacDonald, IR, Notholt, J and Bohrmann, G (2017) Application of the automatic seep location estimator (ASLE) with the use of contextual information for estimating offshore oil seeps. Remote Sensing Applications: Society and Environment, 5. 16-26. doi:10.1016/j.rsase.2016.11.005

Tanikawa, W, Tadai, O, Morono, Y, Hinrichs, KU and Inagaki, F (2018) Geophysical constraints on microbial biomass in subseafloor sediments and coal seams down to 2.5 km off Shimokita Peninsula, Japan. Progress in Earth and Planetary Science, 5(1). doi:10.1186/s40645-018-0217-2

Weber, M, Teeling, H, Huang, S, Waldmann, J, Kassabgy, M, Fuchs, BM, Klindworth, A, Klockow, C, Wichels, A, Gerdts, G, Amann, R and Glöckner, FO (2011) Practical application of self-organizing maps to interrelate biodiversity and functional data in NGS-based metagenomics. Isme Journal, 5. 918-928. doi:10.1038/ismej.2010.180

Wefer, G and Berger, WH (2001) Reconstruction of productivity from the sedimentary record. In: Steele, JH, Turekian, KK and Thorpe , SA (eds.) Encyclopedia of Ocean Sciences. Elsevier Inc., 333-343. ISBN 978-0-12-374473-9 doi:10.1016/B978-012374473-9.00251-4

Wei, CL, Rowe, GT, Escobar-Briones, E, Boetius, A, Soltwedel, T, Caley, MJ, Soliman, Y, Huettmann, F, Qu, F, Yu, Z, Pitcher, CR, Haedrich, RL, Wicksten, MK, Rex, MA, Baguley, JG, Sharma, J, Danovaro, R, MacDonald, IR, Nunnally, CC, Deming, JW, Montagna, P, Levesque, M, Weslawski, JM, Wlodarska-Kowalczuk, M, Ingole, BS, Bett, BJ, Billett, D, Yool, A, Bluhm, BA, Iken, K and Narayanaswamy, BE (2010) Global Patterns and Predictions of Seafloor Biomass Using Random Forests. PLoS ONE, 5(12). e15323. doi:10.1371/journal.pone.0015323

Wohlrab, S, Iversen, MH and John, U (2010) A molecular and co-evolutionary context for grazer induced toxin production in Alexandrium tamarense. PLoS ONE, 5(11). e15039. doi:10.1371/journal.pone.0015039

Wörmer, L, Hoshino, T, Bowles, MW, Viehweger, B, Adhikari, RR, Xiao, N, Uramoto, G, Könneke, M, Lazar, CS, Morono, Y, Inagaki, F and Hinrichs, KU (2019) Microbial dormancy in the marine subsurface: Global endospore abundance and response to burial. Science Advances, 5(2). eaav1024. doi:10.1126/sciadv.aav1024 PANGAEA Supplementary Data

Yassaa, N, Peeken, I, Zöllner, E, Bluhm, K, Arnold, SR, Spracklen, DV and Williams, J (2008) Evidence for marine production of monoterpenes. Environmental Chemistry, 5(6). 391-401. doi:10.1071/EN08047

496

Mollenhauer, G, Grotheer, H, Gentz, T, Bonk, E and Hefter, J (2021) Standard operation procedures and performance of the MICADAS radiocarbon laboratory at Alfred Wegener Institute (AWI), Germany. Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms, 496. 45-51. doi:10.1016/j.nimb.2021.03.016

493

Muller, É, Thomazo, C, Stüeken, EE, Hallmann, C, Leider, A, Chaduteau, C, Buick, R, Baton, F, Philippot, P and Ader, M (2018) Bias in carbon concentration and δ 13 C measurements of organic matter due to cleaning treatments with organic solvents. Chemical Geology, 493. 405-412. doi:10.1016/j.chemgeo.2018.06.018

491

Milucka, J, Ferdelman, TG, Polerecky, L, Franzke, D, Wegener, G, Schmid, M, Lieberwirth, I, Wagner, M, Widdel, F and Kuypers, MMM (2012) Zero-valent sulphur is a key intermediate in marine methane oxidation. Nature, 491. 541-546. doi:10.1038/nature11656

49

Abrantes, FF, Meggers, H, Nave, SO, Bollman, J, Palma, S, Sprengel, C, Henderiks, J, Spies, A, Salgueiro, E, Moita, T and Neuer, S (2002) Fluxes of micro-organisms along a productivity gradient in the Canary Islands region (29°N): implications for paleoreconstructions. Deep Sea Research Part II: Topical Studies in Oceanography, 49. 3599-3629.

Davenport, R, Neuer, S, Helmke, P, Perez-Marrero, J and Llinás, O (2002) Primary productivity in the northern Canary Islands region as inferred from SeaWiFS imagery. Deep Sea Research Part II: Topical Studies in Oceanography, 49. 3481-3496. doi:10.1016/S0967-0645(02)00095-4

Fischer, G, Gersonde, R and Wefer, G (2002) Organic carbon, biogenic silica and diatom fluxes in the marginal winter sea ice zone and in the Polar Front Region: interannual variation and changes in composition. Deep Sea Research Part II: Topical Studies in Oceanography, 49(9-10). 1721-1745. doi:10.1016/S0967-0645(02)00009-7 PANGAEA Supplementary Data

Friedrich, J and Rutgers van der Loeff, MM (2002) A two-tracer (210Po-234Th) approach to distinguish organic and biogenic silica export flux in the Antarctic Circumpoar Current. Deep Sea Research Part I: Oceanographic Research Papers, 49(1). 101-120. doi:10.1016/S0967-0637(01)00045-0

Holmes, ME, Lavik, G, Fischer, G, Segl, M, Ruhland, G and Wefer, G (2002) Seasonal variability of d15N in sinking particles in the Benguela upwelling region. Deep Sea Research Part I: Oceanographic Research Papers, 49(2). 377-394. doi:10.1016/S0967-0637(01)00055-3 PANGAEA Supplementary Data

Linse, K, Bohrmann, G and Sigwart, J (2019) Eualus amandae (Decapoda: Caridea: Thoridae) is an indicator of active venting sites in the Southern Ocean. Marine Biodiversity, 49(6). 2937-2942. doi:10.1007/s12526-019-01018-x

Meggers, H, Freudenthal, T, Nave, SO, Targarona, J, Abrantes, FF and Helmke, P (2002) Assessment of geochemical and micropaleontological sedimentary parameters as proxies of surface water properties in the Canary Islands region. Deep Sea Research Part II: Topical Studies in Oceanography, 49(17). 3631-3654. doi:10.1016/S0967-0645(02)00103-0 PANGAEA Supplementary Data

Neuer, S, Freudenthal, T, Davenport, R, Llinás, O and Rueda, MJ (2002) Seasonality of surface water properties and particle flux along a productivity gradient off NW Africa. Deep Sea Research Part II: Topical Studies in Oceanography, 49(17). 3561-3576. doi:10.1016/S0967-0645(02)00098-X PANGAEA Supplementary Data

Pätsch, J, Kühn, W, Radach, G, Santana Casiano, JM, Gonzalez Davila, M, Neuer, S, Freudenthal, T and Llinás, O (2002) Interannual variability of carbon fluxes at the North Atlantic station ESTOC. Deep Sea Research Part II: Topical Studies in Oceanography, 49. 253. doi:10.1016/S0967-0645(01)00103-5

Rutgers van der Loeff, MM, Buesseler, KO, Bathmann, U, Hense, I and Andrews, J (2002) Comparison of carbon and opal export rates between summer and spring bloom periods in the region of the Antarctic Polar Front, SE Atlantic. Deep Sea Research Part II: Topical Studies in Oceanography, 49(18). 3849-3869. doi:10.1016/S0967-0645(02)00114-5

Sprengel, C, Baumann, KH, Henderiks, J, Henrich, R and Neuer, S (2002) Modern coccolithophore and carbonate sedimentation along a productivity gradient in the Canary Islands region: seasonal export production and surface accumulation rates. Deep Sea Research Part II: Topical Studies in Oceanography, 49(17). 3577-3598. doi:10.1016/S0967-0645(02)00099-1

487

Smetacek, V, Klaas, C, Strass, VH, Assmy, P, Montresor, M, Cisewski, B, Savoye, N, Webb, A, D'Ovidio, F, Arrieta, JM, Bathmann, U, Bellerby, RGJ, Berg, GM, Croot, PL, Gonzales, S, Henjes, J, Herndl, GJ, Hoffmann, LJ, Leach, H, Losch, M, Mills, MM, Neill, C, Peeken, I, Röttgers, R, Sachs, O, Sauter, EJ, Schmidt, MM, Schwarz, J, Terbrüggen, A and Wolf-Gladrow, D (2012) Deep carbon export from a Southern Ocean iron-fertilized diatom bloom. Nature, 487(7407). 313-319. doi:10.1038/nature11229

483

Carracedo, JC, Fernandez-Turiel, JL, Gimeno, D, Guillou, H, Klügel, A, Krastel, S, Paris, R, Perez-Torrado, FJ, Rodriguez-Badiola, E, Rodriguez-Gonzalez, A, Troll, VR, Walter, TR and Wiesmaier, S (2010) Comment on "The distribution of basaltic volcanism on Tenerife, Canary Islands: Implications on the origin and dynamics of the rift systems. Tectonophysics, 483. 310-326. doi:10.1016/j.tecto.2010.10.015

48

Brunner, B, Einsiedl, F, Arnold, GL, Müller, I, Templer, SP and Bernasconi, SM (2012) The reversibility of dissimilatory sulphate reduction and the cell-internal multi-step reduction of sulphite to sulphide: insights from the oxygen isotope composition of sulphate. Isotopes in Environmental and Health Studies, 48(1). 33-54. doi:10.1080/10256016.2011.608128

Cael, BB, Bisson, K, Conte, M, Duret, MT, Follett, CL, Henson, SA, Honda, MC, Iversen, MH, Karl, DM, Lampitt, RS, Mouw, CB, Muller‐Karger, F, Pebody, CA, Smith, KL and Talmy, D (2021) Open ocean particle flux variability from surface to seafloor. Geophysical Research Letters, 48(9). doi:10.1029/2021GL092895

Goedert, JL, Thiel, V, Schmale, O, Rau, WW, Michaelis, W and Peckmann, JL (2003) The Late Eocene Whiskey Creek methane-seep deposit (western Washington State) - Part I: Geology, palaeontology, and molecular geobiology. Facies, 48. 223-240.

Könneke, M, Lipp, JS and Hinrichs, KU (2012) Carbon isotope fractionation by the marine ammonia-oxidizing archaeon Nitrosopumilus maritimus. Organic Geochemistry, 48. 21-24. doi:10.1016/j.orggeochem.2012.04.007

Müller, PJ and Fischer, G (2001) A 4-year sediment trap record of alkenones from the filamentous upwelling region off Cape Blanc, NW Africa and a comparison with distributions in underlying sediments. Deep Sea Research Part I: Oceanographic Research Papers, 48(8). 1877-1903. doi:10.1016/S0967-0637(00)00109-6 PANGAEA Supplementary Data

Peckmann, JL, Goedert, JL, Heinrichs, T, Hoefs, J and Reitner, J (2003) The Late Eocene 'Whiskey Creek' methane-seep deposit (western Washington State) - Part II: Petrology, stable isotopes, and biogeochemistry. Facies, 48. 241-254. doi:10.1007/BF02667542

Wooller, MJ, Pohlman, JW, Gaglioti, BV, Langdon, P, Jones, M, Walter Anthony, KM, Becker, KW, Hinrichs, KU and Elvert, M (2012) Reconstruction of past methane availability in an Arctic Alaska wetland indicates climate influenced methane release during the past ~12,000 years. Journal of Paleolimnology, 48(1). 27-42. doi:10.1007/s10933-012-9591-8

476

Petersen, JM, Zielinski, FU, Pape, T, Seifert, R, Moraru, C, Amann, R, Hourdez, S, Girguis, PR, Wankel, SD, Barbe, V, Pelletier, E, Fink, D, Borowski, C, Bach, W and Dubilier, N (2011) Hydrogen is an energy source for hydrothermal vent symbioses. Nature, 476. 176-180. doi:10.1038/nature10325 PANGAEA Supplementary Data

475

Robb, CS, Reisky, L, Bornscheuer, UT and Hehemann, JH (2018) Specificity and mechanism of carbohydrate demethylation by cytochrome P450 monooxygenases. Biochemical Journal, 475(23). 3875-3886. doi:10.1042/BCJ20180762

470

Hübscher, C, Tahchi, E, Klaucke, I, Millard, A and Sahling, H (2009) Salt tectonic and mud volcanism in the Latakia and Cyprus Basins, eastern Mediterranean. Tectonophysics, 470. 173-182. doi:10.1016/j.tecto.2008.08.019

47

Bühring, S, Schubotz, F, Harms, C, Lipp, JS, Amils, R and Hinrichs, KU (2012) Lipid signatures of acidophilic microbial communities in an extreme, acidic environment: Río Tinto, Spain. Organic Geochemistry, 47. 66-77. doi:10.1016/j.orggeochem.2012.03.010

46

Zhuang, GC, Montgomery, A, Samarkin, VA, Song, M, Liu, J, Schubotz, F, Teske, A, Hinrichs, KU and Joye, SB (2019) Generation and utilization of volatile fatty acids and alcohols in hydrothermally altered sediments in the Guaymas Basin, Gulf of California. Geophysical Research Letters, 46(5). 2637-2646. doi:10.1029/2018GL081284

457

Fischer, C and Lüttge, A (2017) Beyond the conventional understanding of water–rock reactivity. Earth and Planetary Science Letters, 457. 100-105. doi:10.1016/j.epsl.2016.10.019

454

Lipp, JS, Morono, Y, Inagaki, F and Hinrichs, KU (2008) Significant contribution of Archaea to extant biomass in marine subsurface sediments. Nature, 454(t207). 991-994. doi:10.1038/nature07174 PANGAEA Supplementary Data

453

Santelli, CM, Orcutt, BN, Banning, E, Bach, W, Moyer, CL, Sogin, ML, Staudigel, H and Edwards, KJ (2008) Abundance and diversity of microbial life in ocean crust. Nature, 453. 653-656. doi:10.1038/nature06899

45

Küchler, RR, Birgel, D, Kiel, S, Freiwald, A, Goedert, JL, Thiel, V and Peckmann, JL (2012) Miocene methane-derived carbonates from southwestern Washington, USA and a model for silicification at seeps. Lethaia, 45(2). 259-273. doi:10.1111/j.1502-3931.2011.00280.x PANGAEA Supplementary Data

Sakai, K, Türkay, M, Beuck, L and Freiwald, A (2015) A collection of the Infraorder Callianassidea (Decapoda, Pleocyemata) with one new genus and five new species from the Eastern Atlantic off Mauritania (R/V Maria S. Merian cruise MSM 16/3 “PHAETON”). Marine Biodiversity, 45(1). 113-133. doi:10.1007/s12526-014-0227-2

Schmidt, F, Koch, BP, Elvert, M, Schmidt, G, Witt, M and Hinrichs, KU (2011) Diagenetic transformation of dissolved organic nitrogen compounds under contrasting sedimentary redox conditions in the Black Sea. Environmental Science & Technology, 45(12). 5223-5229. doi:10.1021/es2003414 PANGAEA Supplementary Data

Wallis, I, Prommer, H, Pichler, T, Post, V, Norton, SB, Annable, MD and Simmons, CT (2011) Process-Based Reactive Transport Model to Quantify Arsenic Mobility during Aquifer Storage and Recovery of Potable Water. Environmental Science & Technology, 45(16). 6924-6931. doi:10.1021/es201286c

Wisshak, M, Berning, B, Jakobsen, J and Freiwald, A (2015) Temperate carbonate production: biodiversity of calcareous epiliths from intertidal to bathyal depths (Azores). Marine Biodiversity, 45(1). 87-112. doi:10.1007/s12526-014-0231-6

445

Heisterkamp, IM, Kamp, A, Schramm, A, de Beer, D and Stief, P (2012) Indirect control of the intracellular nitrate pool of intertidal sediment by the polychaete Hediste diversicolor. Marine Ecology Progress Series, 445. 181-192. doi:10.3354/meps09464

443

Niemann, H, Lösekann, T, de Beer, D, Elvert, M, Nadalig, T, Knittel, K, Amann, R, Sauter, EJ, Schlüter, M, Klages, M, Foucher, JP and Boetius, A (2006) Novel microbial communities of the Haakon Mosby mud volcano and their role as a methane sink. Nature, 443(5227). 854-858. doi:10.1038/nature05227

44

Smrzka, D, Zwicker, J, Klügel, A, Monien, P, Bach, W, Bohrmann, G and Peckmann, JL (2016) Establishing criteria to distinguish oil-seep from methane-seep carbonates. Geology, 44(8). 667-670. doi:10.1130/G38029.1 PANGAEA Supplementary Data

Sokoll, S, Ferdelman, TG, Holtappels, M, Goldhammer, T, Littmann, S, Iversen, MH and Kuypers, MMM (2017) Intense biological phosphate uptake onto particles in subeuphotic continental margin waters. Geophysical Research Letters, 44(6). 2825-2834. doi:10.1002/2016GL072183 PANGAEA Supplementary Data

438

Enge, AJ, Nomaki, H, Ogawa, NO, Witte, U, Moeseneder, MM, Lavik, G, Ohkouchi, N, Kitazato, H, Kucera, M and Heinz, P (2011) Response of the benthic foraminiferal community to a simulated short-term phytodetritus pulse in the abyssal North Pacific. Marine Ecology Progress Series, 438. 129-142. doi:10.3354/meps09298

433

Mewes, K, Mogollón, JM, Picard, A, Rühlemann, C, Eisenhauer, A, Kuhn, T, Ziebis, W and Kasten, S (2016) Diffusive transfer of oxygen from seamount basaltic crust into overlying sediments: An example from the Clarion–Clipperton Fracture Zone. Earth and Planetary Science Letters, 433. 215-225. doi:10.1016/j.epsl.2015.10.028 PANGAEA Supplementary Data

43

Buttigieg, PL, Fadeev, E, Bienhold, C, Hehemann, L, Offre, P and Boetius, A (2018) Marine microbes in 4D — using time series observation to assess the dynamics of the ocean microbiome and its links to ocean health. Current Opinion in Microbiology, 43. 169-185. doi:10.1016/j.mib.2018.01.015

Fischer, C, Kurganskaya, I, Schäfer, T and Lüttge, A (2014) Variability of crystal surface reactivity: What do we know? Applied Geochemistry, 43. 132-157. doi:10.1016/j.apgeochem.2014.02.002

Kellermann, MY, Schubotz, F, Elvert, M, Lipp, JS, Birgel, D, Prieto-Mollar, X, Dubilier, N and Hinrichs, KU (2012) Symbiont-host relationships in chemosynthetic mussels: A comprehensive lipid biomarker study. Organic Geochemistry, 43(1). 112-124. doi:10.1016/j.orggeochem.2011.10.005

Liu, XL, Lipp, JS, Schröder, JM, Summons, RE and Hinrichs, KU (2012) Isoprenoid glycerol dialkanol diethers: A series of novel archaeal lipids in marine sediments. Organic Geochemistry, 43. 50-55. doi:10.1016/j.orggeochem.2011.11.002

Lohmann, R, Gioia, R, Jones, K, Nizzetto, L, Temme, C, Xie, Z, Schulz-Bull, D, Hand, I, Morgan, E and Jantunen, L (2009) Organochlorine Pesticides and PAHs in the Surface Water and Atmosphere of the North Atlantic and Arctic Ocean. Environmental Science & Technology, 43(15). 5633-5639. doi:10.1021/es901229k

Mogollón, JM, Mewes, K and Kasten, S (2016) Quantifying manganese and nitrogen cycle coupling in manganese-rich, organic carbon-starved marine sediments: Examples from the Clarion-Clipperton fracture zone. Geophysical Research Letters, 43(13). 7114-7123. doi:10.1002/2016GL069117

Versteegh, GJM, Blokker, P, Bogus, K, Harding, I, Lewis, J, Oltmanns, S, Rochon, A and Zonneveld, KAF (2012) Infra red spectroscopy, flash pyrolysis, thermally assisted hydrolysis and methylation (THM) in the presence of tetramethylammonium hydroxide (TMAH) of cultured and sediment-derived Lingulodinium polyedrum (Dinoflagellata) cyst walls. Organic Geochemistry, 43(1). 92-102. doi:10.1016/j.orggeochem.2011.10.007

429

Hu, L, Liu, Y, Xiao, X, Gong, X, Zou, J, Bai, Y, Gorbarenko, S, Fahl, K, Stein, R and Shi, X (2020) Sedimentary records of bulk organic matter and lipid biomarkers in the Bering Sea: A centennial perspective of sea-ice variability and phytoplankton community. Marine Geology, 429. 106308. doi:10.1016/j.margeo.2020.106308

428

Tatzel, M, von Blanckenburg, F, Oelze, M, Schuessler, JA and Bohrmann, G (2015) The silicon isotope record of early silica diagenesis. Earth and Planetary Science Letters, 428. 293-303. doi:10.1016/j.epsl.2015.07.018

426

Huang, Y, Aponte, JC, Zhao, J, Tarozo, R and Hallmann, C (2015) Hydrogen and carbon isotopic ratios of polycyclic aromatic compounds in two CM2 carbonaceous chondrites and implications for prebiotic organic synthesis. Earth and Planetary Science Letters, 426. 101-108. doi:10.1016/j.epsl.2015.06.027

421

Henkel, S, Kasten, S, Poulton, SW and Staubwasser, M (2016) Determination of the stable iron isotopic composition of sequentially leached iron phases in marine sediments. Chemical Geology, 421. 93-102. doi:10.1016/j.chemgeo.2015.12.003 PANGAEA Supplementary Data

420

Smrzka, D, Kraemer, SM, Zwicker, J, Birgel, D, Fischer, D, Kasten, S, Goedert, JL and Peckmann, JL (2015) Constraining silica diagenesis in methane-seep deposits. Palaeogeography, Palaeoclimatology, Palaeoecology, 420. 13-26. doi:10.1016/j.palaeo.2014.12.007

42

Ellegaard, M, Head, MJ and Versteegh, GJM (2018) Linking biological and geological data on dinoflagellates using the genus Spiniferites as an example: the implications of species concepts, taxonomy and dual nomenclature. Palynology, 42. 221-230. doi:10.1080/01916122.2018.1465732

Goldhammer, T, Schwärzle, A, Aiello, IW and Zabel, M (2015) Temporal stability and origin of chemoclines in the deep hypersaline anoxic Urania basin. Geophysical Research Letters, 42(12). 4888-4895. doi:10.1002/2015GL063758 PANGAEA Supplementary Data

Ho, SL, Yamamoto, M, Mollenhauer, G and Minagawa, M (2011) Core top TEX86 values in the south and equatorial Pacific. Organic Geochemistry, 42(1). 94-99. doi:10.1016/j.orggeochem.2010.10.012 PANGAEA Supplementary Data

Keith, M, Haase, KM, Schwarz-Schampera, U, Klemd, R, Petersen, S and Bach, W (2014) Effects of temperature, sulfur, and oxygen fugacity on the composition of sphalerite from submarine hydrothermal vents. Geology, 42(8). 699-702. doi:10.1130/G35655.1

Klein, F, Bach, W, Humphris, SE, Kahl, WA, Jöns, N, Moskowitz, B and Berquo, T (2014) Magnetite in seafloor serpentinite-Some like it hot. Geology, 42(2). 135-138. doi:10.1130/G35068.1

Koch, BP, Souza Filho, PWM, Behling, H, Cohen, MCL, Kattner, G, Rullkötter, J, Scholz-Böttcher, B and Lara, R (2011) Triterpenols in mangrove sediments as a proxy for organic matter derived from the red mangrove (Rhizophora mangle). Organic Geochemistry, 42(1). 62-73. doi:10.1016/j.orggeochem.2010.10.007

Liu, XL, Lipp, JS and Hinrichs, KU (2011) Distribution of intact and core GDGTs in marine sediments. Organic Geochemistry, 42(4). 368-375. doi:10.1016/j.orggeochem.2011.02.003

Marcon, Y, Ondreas, H, Sahling, H, Bohrmann, G and Olu, K (2014) Fluid flow regimes and growth of a giant pockmark. Geology, 42(1). 63-66. doi:10.1130/G34801.1 PANGAEA Supplementary Data

Mertens, KN, Van Nieuwenhove, N, Gurdebeke, PR, Aydin, H, Bogus, K, Bringué, M, Dale, B, De Schepper, S, de Vernal, A, Ellegaard, M, Grothe, A, Gu, H, Head, MJ, Heikkilä, M, Limoges, A, Londeix, L, Louwye, S, Marret, F, Masure, E, Matsuoka, K, Mudie, PJ, Penaud, A, Pospelova, V, Price, AM, Ribeiro, S, Rochon, A, Sangiorgi, F, Schreck, M, Torres, V, Uzar, S, Versteegh, GJM, Warny, S and Zonneveld, KAF (2018) The dinoflagellate cyst genera Achomosphaera Evitt 1963 and Spiniferites Mantell 1850 in Pliocene to modern sediments: a summary of round table discussions. Palynology, 42. 10-44. doi:10.1080/01916122.2018.1465739

Romero-Sarmiento, MF, Riboulleau, A, Vecoli, M and Versteegh, GJM (2011) Aliphatic and aromatic biomarkers from Gondwanan sediments of Late Ordovician to Early Devonian age: An early terrestrialization approach. Organic Geochemistry, 42(6). 605-617. doi:10.1016/j.orggeochem.2011.04.005

Zhu, C, Weijers, JWH, Wagner, T and Pancost, RD (2011) Sources and distribution of tetraether lipids in surface sediments across a large river-dominated continental margin. Organic Geochemistry, 42. 376-386. doi:10.1016/j.orggeochem.2011.02.002

415

Himmler, T, Birgel, D, Bayon, G, Pape, T, Ge, L, Bohrmann, G and Peckmann, JL (2015) Formation of seep carbonates along the Makran convergent margin, northern Arabian Sea and a molecular and isotopic approach to constrain the carbon isotopic composition of parent methane. Chemical Geology, 415. 102-117. doi:10.1016/j.chemgeo.2015.09.016 PANGAEA Supplementary Data

41

Aquilina, A, Knab, N, Knittel, K, Knaur, G, Geissler, A, Kelly, SP, Fossing, H, Boot, CS, Parkes, RJ, Mills, RA, Boetius, A, Lloyd, JR and Pancost, RD (2010) Biomarker indicators for anaerobic oxidizers of methane in brackish-marine sediments with diffusive methane fluxes. Organic Geochemistry, 41(4). 414-426. doi:10.1016/j.orggeochem.2009.09.009

Blumenberg, M, Mollenhauer, G, Zabel, M, Reimer, A and Thiel, V (2010) Decoupling of bio- and geohopanoids in sediments of the Benguela Upwelling System (BUS). Organic Geochemistry, 41(10). 119-1129. doi:10.1016/j.orggeochem.2010.06.005

Brummer, GJA and Kucera, M (2022) Taxonomic review of living planktonic foraminifera. Journal of Micropalaeontology, 41(1). 29-74. doi:10.5194/jm-41-29-2022

Heuer, VB, Krüger, M, Elvert, M and Hinrichs, KU (2010) Experimental studies on the stable carbon isotope biogeochemistry of acetate in lake sediments. Organic Geochemistry, 41(1). 22-30. doi:10.1016/j.orggeochem.2009.07.004.

Hinrichs, KU, Michaelis, W and Rullkötter, J (2010) Advances in Organic Geochemistry 2009 - Proceedings of the 24th International Meeting on Organic Geochemistry. Organic Geochemistry, 41(9). 857. doi:10.1016/j.orggeochem.2010.06.007

Mertens, KN, Gu, H, Takano, Y, Price, AM, Pospelova, V, Bogus, K, Versteegh, GJM, Marret, F, Turner, RE, Rabalais, NN and Matsuoka, K (2017) The cyst-theca relationship of the dinoflagellate cyst Trinovantedinium pallidifulvum, with erection of Protoperidinium lousianensis sp. nov. and their phylogenetic position within the Conica group. Palynology, 41(2). 183-202. doi:10.1080/01916122.2016.1147219

Rethemeyer, J, Schubotz, F, Talbot, HM, Cooke, MP, Hinrichs, KU and Mollenhauer, G (2010) Distribution of polar membrane lipids in permafrost soils and sediments of a small high Arctic catchment. Organic Geochemistry, 41. 1130-1145. doi:10.1016/j.orggeochem.2010.06.004

Romero-Sarmiento, MF, Riboulleau, A, Vecoli, M and Versteegh, GJM (2010) Occurrence of retene in upper Silurian-lower Devonian sediments from North Africa: Origin and implications. Organic Geochemistry, 41(3). 302-306. doi:10.1016/j.orggeochem.2009.10.003

Wegener, G, Kellermann, MY and Elvert, M (2016) Tracking activity and function of microorganisms by stable isotope probing of membrane lipids. Current Opinion in Biotechnology, 41. 43-52. doi:10.1016/j.copbio.2016.04.022

Zhang, X, Prange, M, Merkel, U and Schulz, M (2014) Instability of the Atlantic overturning circulation during Marine Isotope Stage 3. Geophysical Research Letters, 41(12). 4285-4293. doi:10.1002/2014GL060321

408

Zonneveld, KAF, Gray, DD, Kuhn, G and Versteegh, GJM (2019) Postdepositional aerobic and anaerobic particulate organic matter degradation succession reflected by dinoflagellate cysts: The Madeira Abyssal Plain revisited. Marine Geology, 408. 87-109. doi:10.1016/j.margeo.2018.11.010

407

Price, RE, LaRowe, DE, Italiano, F, Savov, I, Pichler, T and Amend, JP (2015) Subsurface hydrothermal processes and the bioenergetics of chemolithoautotrophy at the shallow-sea vents off Panarea Island (Italy). Chemical Geology, 407. 21-45. doi:10.1016/j.chemgeo.2015.04.011 PANGAEA Supplementary Data

404

März, C, Riedinger, N, Sena, C and Kasten, S (2018) Phosphorus dynamics around the sulphate-methane transition in continental margin sediments: Authigenic apatite and Fe(II) phosphates. Marine Geology, 404. 84-96. doi:10.1016/j.margeo.2018.07.010

403

Römer, M, Torres, M, Kasten, S, Kuhn, G, Graham, AGC, Mau, S, Little, CTS, Linse, K, Pape, T, Geprägs, P, Fischer, D, Wintersteller, P, Marcon, Y, Rethemeyer, J and Bohrmann, G (2014) First evidence of widespread active methane seepage in the Southern Ocean, off the sub-Antarctic island of South Georgia. Earth and Planetary Science Letters, 403. 166-177. doi:10.1016/j.epsl.2014.06.036 PANGAEA Supplementary Data

Smith, GL, McNeill, LC, Henstock, TJ, Arraiz, D and Spiess, V (2014) Fluid generation and distribution in the highest sediment input accretionary margin, the Makran. Earth and Planetary Science Letters, 403. 131-143. doi:10.1016/j.epsl.2014.06.030 PANGAEA Supplementary Data

40

Amend, AS, Oliver, TA, Amaral-Zettler, LA, Boetius, A, Fuhrman, JA, Horner-Devine, MC, Huse, SM, Welch, DBM, Martiny, AC, Ramette, A, Zinger, L, Sogin, ML and Martiny, JBH (2013) Macroecological patterns of marine bacteria on a global scale. Journal of Biogeography, 40(4). 800-811. doi:10.1111/jbi.12034

Bradley, AS, Fredricks, HF, Hinrichs, KU and Summons, RE (2009) Structural diversity of diether lipids in carbonate chimneys at the Lost City Hydrothermal Field. Organic Geochemistry, 40(12). 1169-1178. doi:10.1016/j.orggeochem.2009.09.004

Ilyina, T, Wolf-Gladrow, D, Munhoven, G and Heinze, C (2013) Assessing the potential of calcium-based artificial ocean alkalinization to mitigate rising atmospheric CO2 and ocean acidification. Geophysical Research Letters, 40(22). 5909-5914. doi:10.1002/2013GL057981

Kiel, S and Peckmann, JL (2007) Chemosymbiotic bivalves and stable carbon isotopes indicate hydrocarbon seepage at four unusual Cenozoic fossil localities. Lethaia, 40(4). 345-357. doi:10.1111/j.1502-3931.2007.00033.x

Lückge, A, Deplazes, G, Schulz, H, Scheeder, G, Suckow, A, Kasten, S and Haug, GH (2012) Impact of Indus River discharge on productivity and preservation of organic carbon in the Arabian Sea over the twentieth century. Geology, 40(5). 399-402. doi:10.1130/G32608.1

Mollenhauer, G, Schneider, RR, Jennerjahn, TC, Müller, PJ and Wefer, G (2004) Organic carbon accumulation in the South Atlantic Ocean: its modern, mid-Holocene and last glacial distribution. Global and Planetary Change, 40(3-4). 249-266. doi:10.1016/j.gloplacha.2003.08.002 PANGAEA Supplementary Data

Peckmann, JL, Senowbari-Daryan, B, Birgel, D and Goedert, JL (2007) The crustacean ichnofossil Palaxius associated with acllianassid body fossils in an Eocene methane-seep limestone, Humptulips Formation, Olympic Peninsula, Washington. Lethaia, 40(3). 273-280. doi:10.1111/j.1502-3931.2007.00026.x

Römer, M, Sahling, H, dos Santos Ferreira, C and Bohrmann, G (2020) Methane gas emissions of the Black Sea—mapping from the Crimean continental margin to the Kerch Peninsula slope. Geo-Marine Letters, 40. 467-480. doi:10.1007/s00367-019-00611-0

Schlindwein, V, Demuth, A, Geissler, WH and Jokat, W (2013) Seismic gap beneath Logachev Seamount: Indicator for melt focusing at an ultraslow mid-ocean ridge? Geophysical Research Letters, 40(9). 1703-1707. doi:10.1002/grl.50329

Sepúlveda, J, Wendler, J, Leider, A, Kuss, HJ, Summons, RE and Hinrichs, KU (2009) Molecular-isotopic evidence of environmental and ecological changes across the Cenomanian-Turonian boundary in the Levant Platform of central Jordan. Organic Geochemistry, 40. 553-568. doi:10.1016/j.orggeochem.2009.02.009

Stanev, EV, He, Y, Grayek, S and Boetius, A (2013) Oxygen dynamics in the Black Sea as seen by Argo profiling floats. Geophysical Research Letters, 40(12). 3085-3090. doi:10.1002/grl.50606

4

Fadeev, E, Rogge, A, Ramondenc, S, Nöthig, EM, Wekerle, C, Bienhold, C, Salter, I, Waite, AM, Hehemann, L, Boetius, A and Iversen, MH (2021) Sea ice presence is linked to higher carbon export and vertical microbial connectivity in the Eurasian Arctic Ocean. Communications Biology, 4(1). doi:10.1038/s42003-021-02776-w

Gomez-Pereira, PR, Fuchs, BM, Alonso, C, Oliver, MJ, van Beusekom, J and Amann, R (2010) Distinct flavobacterial communities in contrasting water masses of the North Atlantic Ocean. Isme Journal, 4(4). 472-487. doi:10.1038/ismej.2009.142 PANGAEA Supplementary Data

Grünke, S, Lichtschlag, A, de Beer, D, Kuypers, MMM, Lösekann-Behrens, T, Ramette, A and Boetius, A (2010) Novel observations of Thiobacterium, a sulfur-storing Gammaproteobacterium producing gelatinous mats. Isme Journal, 4(8). 1031-1043. doi:10.1038/ismej.2010.23

Heuer, VB, Elvert, M, Tille, S, Prieto-Mollar, X, Hmelo, LR, Krummen, M and Hinrichs, KU (2006) Online d13C analysis of volatile fatty acids in sediment/porewater systems by liquid chromatography-isotope ratio-mass spectrometry. Limnology and Oceanography-Methods, 4. 346-357. doi/10.4319/lom.2006.4.346

Ijiri, A, Inagaki, F, Kubo, Y, Adhikari, RR, Hattori, S, Hoshino, T, Imachi, H, Kawagucci, S, Morono, Y, Ohtomo, Y, Ono, S, Sakai, S, Takai, K, Toki, T, Wang, DT, Yoshinaga, MY, Arnold, GL, Ashi, J, Case, DH, Feseker, T, Hinrichs, KU, Ikegawa, Y, Ikehara, M, Kallmeyer, J, Kumagai, H, Lever, MA, Morita, S, Nakamura, K, Nakamura, Y, Nishizawa, M, Orphan, VJ, Røy, H, Schmidt, F, Tani, A, Tanikawa, W, Terada, T, Tomaru, H, Tsuji, T, Tsunogai, U, Yamaguchi, YT and Yoshida, N (2018) Deep-biosphere methane production stimulated by geofluids in the Nankai accretionary complex. Science Advances, 4(6). eaao4631. doi:10.1126/sciadv.aao4631

Kitzinger, K, Padilla, CC, Marchant, HK, Hach, PF, Herbold, CW, Kidane, AT, Könneke, M, Littmann, S, Mooshammer, M, Niggemann, J, Petrov, S, Richter, A, Stewart, FJ, Wagner, M, Kuypers, MMM and Bristow, LA (2019) Cyanate and urea are substrates for nitrification by Thaumarchaeota in the marine environment. Nature Microbiology, 4(2). 234-243. doi:10.1038/s41564-018-0316-2

Kleiner, M, Young, JC, Shah, M, VerBerkmoes, NC and Dubilier, N (2013) Metaproteomics reveals abundant transposase expression in mutualistic endosymbionts. mBio, 4(3). e00223-13. doi:10.1128/mBio.00223-13

Lagostina, L, Frandsen, S, MacGregor, BJ, Glombitza, C, Deng, L, Fiskal, A, Li, J, Doll, M, Geilert, S, Schmidt, M, Scholz, F, Bernasconi, SM, Jørgensen, BB, Hensen, C, Teske, A and Lever, MA (2021) Interactions between temperature and energy supply drive microbial communities in hydrothermal sediment. Communications Biology, 4(1). doi:10.1038/s42003-021-02507-1

Meador, TB, Goldenstein, NI, Gogou, A, Herut, B, Psarra, S, Tsagaraki, TM and Hinrichs, KU (2017) Planktonic lipidome responses to aeolian dust input in low-biomass oligotrophic marine mesocosms. Frontiers in Marine Science, 4. doi:10.3389/fmars.2017.00113

Meyer, S, Wegener, G, Lloyd, KG, Teske, A, Boetius, A and Ramette, A (2013) Microbial habitat connectivity across spatial scales and hydrothermal temperature gradients at Guaymas Basin. Frontiers in Microbiology, 4. doi:10.3389/fmicb.2013.00207

Molari, M, Guilini, K, Lott, C, Weber, M, de Beer, D, Meyer, S, Ramette, A, Wegener, G, Wenzhöfer, F, Martin, D, Cibic, T, De Vittor, C, Vanreusel, A and Boetius, A (2018) CO2 leakage alters biogeochemical and ecological functions of submarine sands. Science Advances, 4(2). eaao2040. doi:10.1126/sciadv.aao2040 PANGAEA Supplementary Data

Moradi, N, Liu, B, Iversen, MH, Kuypers, MMM, Ploug, H and Khalili, A (2018) A new mathematical model to explore microbial processes and their constraints in phytoplankton colonies and sinking marine aggregates. Science Advances, 4(10). eaat1991. doi:10.1126/sciadv.aat1991

Orcutt, BN, Wheat, CG, Rouxel, OJ, Hulme, S, Edwards, KJ and Bach, W (2013) Oxygen consumption rates in subseafloor basaltic crust derived from a reaction transport model. Nature Communications, 4. doi:10.1038/ncomms3539

Pape, T, Blumenberg, M, Seifert, R, Bohrmann, G and Michaelis, W (2008) Marine methane biogeochemistry of the Black Sea: A review. In: Dilek, Y, Furnes, H and Muehlenbachs, K (eds.) Links between Geological Processes, Microbial Activities & Evolution of Life. Modern Approaches in Solid Earth Sciences, 4. Springer, Dordrecht, Heidelberg, London, New York, 281-311. doi:10.1007/978-1-4020-8306-8_9

Pauli, NC, Metfies, K, Pakhomov, EA, Neuhaus, S, Graeve, M, Wenta, P, Flintrop, CM, Badewien, TH, Iversen, MH and Meyer, B (2021) Selective feeding in Southern Ocean key grazers—diet composition of krill and salps. Communications Biology, 4(1). doi:10.1038/s42003-021-02581-5

Pena, A, Teeling, H, Huerta-Cepas, J, Santos, F, Yarza, P, Brito-Echeverria, J, Lucio, M, Schmitt-Kopplin, P, Meseguer, I, Schenowitz, C, Dossat, C, Barbe, V, Dopazo, J, Rosselló-Móra, R, Schüler, M, Glöckner, FO, Amann, R, Gabaldon, T and Anton, J (2010) Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains. Isme Journal, 4(7). 882-895. doi:10.1038/ismej.2010.6

Price, RE, Lesniewski, R, Nitzsche, KS, Meyerdierks, A, Saltikov, C, Pichler, T and Amend, JP (2013) Archaeal and bacterial diversity in an arsenic-rich shallow-sea hydrothermal system undergoing phase separation. Frontiers in Microbiology, 4. doi:10.3389/fmicb.2013.00158

Rommerskirchen, F, Eglinton, G, Dupont, LM, Güntner, U, Wenzel, C and Rullkötter, J (2003) A north to south transect of Holocene southeast Atlantic continental margin sediments: Relationship between aerosol transport and compound-specific d13C land plant biomarker and pollen records. Geochemistry Geophysics Geosystems, 4(12). 1101. doi:10.1029/2003GC000541 PANGAEA Supplementary Data

Rubin-Blum, M, Dubilier, N and Kleiner, M (2019) Genetic evidence for two carbon fixation pathways (the Calvin-Benson-Bassham cycle and the reverse tricarboxylic acid cycle) in symbiotic and free-living bacteria. mSphere, 4(1). doi:10.1128/mSphere.00394-18

Sapart, C, van der Veen, C, Vigano, I, Brass, M, van de Wal, RSW, Bock, M, Fischer, H, Sowers, TA, Buizert, C, Sperlich, P, Blunier, T, Behrens, M, Schmitt, J, Seth, B and Röckmann, T (2011) Simultaneous stable isotope analysis of methane and nitrous oxide on ice core samples. Atmospheric Measurement Techniques, 4(12). 2607-2618. doi:10.5194/amt-4-2607-2011

Sawicka, JE, Robador, A, Hubert, C, Jørgensen, BB and Brüchert, V (2010) Effects of freeze-thaw cycles on anaerobic microbial processes in an Arctic intertidal mud flat. Isme Journal, 4(4). 585-594. doi:10.1038/ismej.2009.140

Sayavedra, L, Kleiner, M, Ponnudurai, R, Wetzel, S, Pelletier, E, Barbe, V, Satoh, N, Shoguchi, E, Fink, D, Breusing, C, Reusch, TBH, Rosenstiel, P, Schilhabel, MB, Becher, D, Schweder, T, Markert, S, Dubilier, N and Petersen, JM (2015) Abundant toxin-related genes in the genomes of beneficial symbionts from deep-sea hydrothermal vent mussels. eLife, 4. doi:10.7554/eLife.07966

Wang, Y, Wegener, G, Hou, J, Wang, F and Xiao, X (2019) Expanding anaerobic alkane metabolism in the domain of Archaea. Nature Microbiology, 4(4). 595-602. doi:10.1038/s41564-019-0364-2

White, RH, Allen, KD and Wegener, G (2019) Identification of a redox active thioquinoxalinol sulfate compound produced by an anaerobic methane-oxidizing microbial consortium. ACS Omega, 4(27). 22613-22622. doi:10.1021/acsomega.9b03450

399

Deusner, C, Holler, T, Arnold, GL, Bernasconi, SM, Formolo, MJ and Brunner, B (2014) Sulfur and oxygen isotope fractionation during sulfate reduction coupled to anaerobic oxidation of methane is dependent on methane concentration. Earth and Planetary Science Letters, 399. 61-73. doi:10.1016/j.epsl.2014.04.047

390

Peckmann, JL, Sandy, MR, Taylor, DG, Gier, S and Bach, W (2013) An Early Jurassic brachiopod-dominated seep deposit enclosed by serpentinite, eastern Oregon, USA. Palaeogeography, Palaeoclimatology, Palaeoecology, 390. 4-16. doi:10.1016/j.palaeo.2013.01.003

39

Birgel, D, Elvert, M, Han, X and Peckmann, JL (2008) 13C-depleted biphytanic diacids as tracers of past anaerobic oxidation of methane. Organic Geochemistry, 39. 169-173. doi:10.1016/j.orggeochem.2007.08.013

Birgel, D and Peckmann, JL (2008) Aerobic methanotrophy at ancient marine methane-seeps: A synthesis. Organic Geochemistry, 39. 1659-1667. doi:10.1016/j.orggeochem.2008.01.023

Elvert, M and Niemann, H (2008) Occurrence of unusual steroids and hopanoids derived from aerobic methanotrophs at an active marine mud volcano. Organic Geochemistry, 39(2). 167-177. doi:10.1016/j.orggeochem.2007.11.006

Hsu, CW, MacDonald, IR, Römer, M, Pape, T, Sahling, H, Wintersteller, P and Bohrmann, G (2019) Characteristics and hydrocarbon seepage at the Challenger Knoll in the Sigsbee Basin, Gulf of Mexico. Geo-Marine Letters, 39(5). 391-399. doi:10.1007/s00367-019-00595-x

Jurado, E, Jaward, FM, Lohmann, R, Jones, KC, Simo, R and Dachs, J (2005) Wet deposition of persistent organic pollutants to the global Oceans. Environmental Science and Technology, 39. 2426-2435. doi:10.1021/es048599g

Kucera, M, Silye, L, Weiner, AKM, Darling, K, Lübben, B, Holzmann, M, Pawlowski, J, Schönfeld, J and Morard, R (2017) Caught in the act: anatomy of an ongoing benthic-planktonic transition in a marine protist. Journal of Plankton Research, 39(3). 436-449. doi:10.1093/plankt/fbx018

Lee, RGM, Coleman, P, Jones, JL, Jones, KC and Lohmann, R (2005) Emission factors and importance of PCDD/Fs, PCBs, PCNs, PAHs and PM10 from the domestic burning of coal and wood in the U.K. Environmental Science and Technology, 39. 1436-1447. doi:10.1021/es048745i

Lohmann, R, MacFarlane, JK and Gschwend, PM (2005) Importance of Black Carbon to Sorption of PAHs, PCBs and PCDDs in Boston and New York Harbor Sediments. Environmental Science and Technology, 39(1). 141-8. doi:10.1021/es049424+

Lüdtke, A, Jerosch, K, Herzog, O and Schlüter, M (2012) Development of a machine learning technique for automatic analysis of seafloor image data: Case example, Pogonophora coverage at mud volcanoes. Computers & Geosciences, 39. 120-128. doi:10.1016/j.cageo.2011.06.020

Meyer, N, Wisshak, M and Freiwald, A (2020) Ichnodiversity and bathymetric range of microbioerosion traces in polar barnacles of Svalbard. Polar Research, 39(0). doi:10.33265/polar.v39.3766

Niemann, H and Elvert, M (2008) Diagnostic lipid biomarker and stable carbon isotope signatures of microbial communities mediating the anaerobic oxidation of methane with sulphate. Organic Geochemistry, 39(12). 1668-1677. doi:10.1016/j.orggeochem.2007.11.003

Raddatz, J, Titschack, J, Frank, N, Freiwald, A, Conforti, A, Osborne, A, Skornitzke, S, Stiller, W, Rüggeberg, A, Voigt, S, Albuquerque, ALS, Vertino, A, Schröder-Ritzrau, A and Bahr, A (2020) Solenosmilia variabilis-bearing cold-water coral mounds off Brazil. Coral Reefs, 39(1). 69-83. doi:10.1007/s00338-019-01882-w

Rossel, PE, Lipp, JS, Fredricks, HF, Arnds, J, Boetius, A, Elvert, M and Hinrichs, KU (2008) Intact polar lipids of anaerobic methanotrophic archaea and associated bacteria. Organic Geochemistry, 39(8). 992-999. doi:10.1016/j.orggeochem.2008.02.021

Stadnitskaia, A, Bouloubassi, I, Elvert, M, Hinrichs, KU and Sinninghe Damsté, JS (2008) Extended hydroxyarchaeol, a novel lipid biomarker for anaerobic methanotrophy in cold seepage habitats. Organic Geochemistry, 39(8). 1007-1014. doi:10.1016/j.orggeochem.2008.04.019

Usbeck, R, Schlitzer, R, Fischer, G and Wefer, G (2003) Particle fluxes in the ocean: comparison of sediment trap data with results from inverse modeling. Journal of Marine Systems, 39(3-4). 167-183. doi:10.1016/S0924-7963(03)00029-0

385

Feng, D, Birgel, D, Peckmann, J, Roberts, HH, Joye, SB, Sassen, R, Liu, XL, Hinrichs, KU and Chen, D (2014) Time integrated variation of sources of fluids and seepage dynamics archived in authigenic carbonates from Gulf of Mexico Gas Hydrate Seafloor Observatory. Chemical Geology, 385. 129-139. doi:10.1016/j.chemgeo.2014.07.020

38

Blumenberg, M, Pape, T, Seifert, R, Bohrmann, G and Schlömer, S (2018) Can hydrocarbons entrapped in seep carbonates serve as gas geochemistry recorder? Geo-Marine Letters, 38(2). 121-129. doi:10.1007/s00367-017-0522-6 PANGAEA Supplementary Data

Jaward, FM, Barber, JL, Booij, K, Dachs, J, Lohmann, R and Jones, KC (2004) Evidence for dynamic air-water coupling of persistent organic pollutants over the open Atlantic Ocean. Environmental Science and Technology, 38(9). 2617-2625. doi:10.1021/es049881q

Jurado, E, Jaward, FM, Lohmann, R, Jones, KC, Simo, R and Dachs, J (2005) Atmospheric dry deposition of persistent organic pollutants to the Atlantic and inferences for the global Oceans. Environmental Science and Technology, 38. 5505-5513. doi:10.1021/es049240v

Jurado, E, Jaward, FM, Lohmann, R, Jones, KC, Simo, R and Dachs, J (2004) Atmospheric dry deposition of persistent organic pollutants to the Atlantic and inferences for the global Oceans. Environmental Science and Technology, 38. 5505-5513. doi:10.1021/es049240v

Koop-Jakobsen, K and Wenzhöfer, F (2015) The dynamics of plant-mediated sediment oxygenation in Spartina anglica rhizospheres—a planar optode study. Estuaries and Coasts, 38(3). 951-963. doi:10.1007/s12237-014-9861-y

Lohmann, R, Jaward, FM, Durham, L, Barber, JL, Jones, KC, Bruhn, R, Lakaschus, S, Dachs, J, Booij, K and Bidleman, T (2004) Potential contamination of ship-board air samples with PCBs and other persistent organic pollutants: implications and solutions. Environmental Science and Technology, 38(14). 3965-3970. doi:10.1021/es035005l

Lohmann, R and Lammel, G (2004) Adsorptive and absorptive contributions to the gas particle partitioning of polycyclic aromatic hydrocarbons: State of knowledge and recommended parameterisation for modelling. Environmental Science and Technology, 38(14). 3793-3803. doi:10.1021/es035337q

Rosselló-Móra, R and Amann, R (2015) Past and future species definitions for Bacteria and Archaea. Systematic and Applied Microbiology, 38(4). 209-216. doi:10.1016/j.syapm.2015.02.001

Schleifer, KH, Amann, R and Rosselló-Móra, R (2015) Taxonomy in the age of genomics. Systematic and Applied Microbiology, 38(4). 207-208. doi:10.1016/j.syapm.2015.05.002

Versteegh, GJM, Blokker, P, Marshall, CR and Pross, J (2007) Macromolecular composition of the dinoflgellate cyst Thalassiphora pelagica (Oligocene, SW Germany). Organic Geochemistry, 38. 1643-1656. doi:10.1016/j.orggeochem.2007.06.007

373

Hahn, CJ, Lemaire, ON, Kahnt, J, Engilberge, S, Wegener, G and Wagner, T (2021) Crystal structure of a key enzyme for anaerobic ethane activation. Science, 373(6550). 118-121. doi:10.1126/science.abg1765

370

Heuer, VB, Inagaki, F, Morono, Y, Kubo, Y, Spivack, AJ, Viehweger, B, Treude, T, Beulig, F, Schubotz, F, Tonai, S, Bowden, SA, Cramm, M, Henkel, S, Hirose, T, Homola, K, Hoshino, T, Ijiri, A, Imachi, H, Kamiya, N, Kaneko, M, Lagostina, L, Manners, H, McClelland, HL, Metcalfe, K, Okutsu, N, Pan, D, Raudsepp, MJ, Sauvage, J, Tsang, MY, Wang, DT, Whitaker, E, Yamamoto, Y, Yang, K, Maeda, L, Adhikari, RR, Glombitza, C, Hamada, Y, Kallmeyer, J, Wendt, J, Wörmer, L, Yamada, Y, Kinoshita, M and Hinrichs, KU (2020) Temperature limits to deep subseafloor life in the Nankai Trough subduction zone. Science, 370(6521). 1230-1234. doi:10.1126/science.abd7934

37

Al-Sabouni, N, Fenton, IS, Telford, RJ and Kučera, M (2018) Reproducibility of species recognition in modern planktonic foraminifera and its implications for analyses of community structure. Journal of Micropalaeontology, 37(2). 519-534. doi:10.5194/jm-37-519-2018

Birgel, D, Thiel, V, Hinrichs, KU, Elvert, M, Campbell, KA, Reitner, J, Farmer, JD and Peckmann, JL (2006) Lipid biomarker patterns of methane-seep microbialites from the Mesozoic convergent margin of California. Organic Geochemistry, 37(10). 1289-1302. doi:10.1016/j.orggeochem.2006.02.004

Blokker, P, van den Ende, H, de Leeuw, JW, Versteegh, GJM and Sinninghe Damsté, JS (2006) Chemical fingerprinting of algaenans using RuO4 degradation. Organic Geochemistry, 37(8). 871-881. doi:10.1016/j.orggeochem.2006.05.005

Layne, GD, Kent, A and Bach, W (2009) d37 Cl Systematics of a Back-Arc Spreading System: The Lau Basin. Geology, 37(5). 427-430. doi:10.1130/G25520A.1

Masqué, P, Cochran, JK, Hebbeln, D, Hirschberg, DJ, Dethleff, D and Winkler, A (2003) The role of sea ice in the fate of contaminants in the Arctic Ocean: plutonium atom ratios in the Fram Strait. Environmental Science and Technology, 37(21). 4848-4854. doi:10.1021/es034176n

Peckmann, JL, Birgel, D and Kiel, S (2009) Molecular fossils reveal fluid composition and flow intensity at a Cretaceous seep. Geology, 37. 847-850. doi:10.1130/G25658A.1

369-37

Hayes, CT, Anderson, RF, Jaccard, SL, François, R, Fleisher, MQ, Soon, M and Gersonde, R (2013) A new perspective on boundary scavenging in the North Pacific Ocean. Earth and Planetary Science Letters, 369-37. 86-97. doi:10.1016/j.epsl.2013.03.008 PANGAEA Supplementary Data

369

Xing, J and Spiess, V (2015) Shallow gas transport and reservoirs in the vicinity of deeply rooted mud volcanoes in the central Black Sea. Marine Geology, 369. 67-78. doi:10.1016/j.margeo.2015.08.005

367

Poulsen, LK and Iversen, MH (2008) Degradation of copepod fecal pellets: key role of protozooplankton. Marine Ecology Progress Series, 367. 1-13. doi:10.3354/meps07611 PANGAEA Supplementary Data

362

Rausch, S, Böhm, F, Bach, W, Klügel, A and Eisenhauer, A (2013) Calcium carbonate veins in ocean crust record a threefold increase of seawater Mg/Ca in the past 30 million years. Earth and Planetary Science Letters, 362. 215-224. doi:10.1016/j.epsl.2012.12.005 PANGAEA Supplementary Data

361

Bobrovskiy, I, Hope, JM, Ivantsov, A, Nettersheim, BJ, Hallmann, C and Brocks, JJ (2018) Ancient steroids establish the Ediacaran fossil Dickinsonia as one of the earliest animals. Science, 361(6408). 1246-1249. doi:10.1126/science.aat7228

36

Alfken, S, Wörmer, L, Lipp, JS, Napier, T, Elvert, M, Wendt, J, Schimmelmann, A and Hinrichs, KU (2021) Disrupted coherence between upwelling strength and redox conditions reflects source water change in Santa Barbara Basin during the 20th century. Paleoceanography and Paleoclimatology, 36(12). doi:10.1029/2021PA004354

Birgel, D, Himmler, T, Freiwald, A and Peckmann, JL (2008) A new constraint on the antiquity of anaerobic oxidation of methane: Late Pennsylvanian seep limestones from southern Namibia. Geology, 36(7). 543-546. doi:10.1130/G24690A

Iversen, MH (2014) Is microbial gardening a food gamble or a safe bet? (Comment on DOI 10.1002/bies.201400100). BioEssays, 36(12). 1126. doi:10.1002/bies.201400181

Krupke, A, Musat, N, LaRoche, J, Mohr, W, Fuchs, BM, Amann, RI, Kuypers, MMM and Foster, RA (2013) In situ identification and N2 and C fixation rates of uncultivated cyanobacteria populations. Systematic and Applied Microbiology, 36(4). 259-271. doi:10.1016/j.syapm.2013.02.002

357

Nuzzo, M, Elvert, M, Schmidt, M, Scholz, F, Reitz, A, Hinrichs, KU and Hensen, C (2012) Impact of hot fluid advection on hydrocarbon gas production and seepage in mud volcano sediments of thick Cenozoic deltas. Earth and Planetary Science Letters, 357. 421. doi:10.1016/j.epsl.2012.05.009 PANGAEA Supplementary Data

354

Ksionzek, KB, Lechtenfeld, OJ, McCallister, SL, Schmitt-Kopplin, P, Geuer, JK, Geibert, W and Koch, BP (2016) Dissolved organic sulfur in the ocean: Biogeochemistry of a petagram inventory. Science, 354(6311). 456-459. doi:10.1126/science.aaf7796 PANGAEA Supplementary Data

Müller, IA, Brunner, B and Coleman, M (2013) Isotopic evidence of the pivotal role of sulfite oxidation in shaping the oxygen isotope signature of sulfate. Chemical Geology, 354. 186-202. doi:10.1016/j.chemgeo.2013.05.009

352

Raddatz, J, Liebetrau, V, Rüggeberg, A, Hathorne, EC, Krabbenhöft, A, Eisenhauer, A, Böhm, F, Vollstaedt, H, Fietzke, J, López Correa, M, Freiwald, A and Dullo, WC (2013) Stable Sr-isotope, Sr/Ca, Mg/Ca, Li/Ca and Mg/Li ratios in the scleractinian cold-water coral Lophelia pertusa. Chemical Geology, 352. 143-152. doi:10.1016/j.chemgeo.2013.06.013

350

Iversen, MH and Poulsen, LK (2007) Coprorhexy, coprophagy, and coprochaly in the copepods Calanus helgolandicus, Pseudocalanus elongatus, and Oithona similis. Marine Ecology Progress Series, 350. 79-89. doi:10.3354/meps07095 PANGAEA Supplementary Data

35

Huber, R and Klump, J (2009) Charting taxonomic knowledge through ontologies and ranking algorithms. Computers & Geosciences, 35(4). 862-868. doi:10.1016/j.cageo.2008.02.016

Häggi, C, Hopmans, EC, Schefuß, E, Sawakuchi, AO, Schreuder, LT, Bertassoli, DJ, Chiessi, CM, Mulitza, S, Sawakuchi, HO, Baker, PA and Schouten, S (2021) Negligible quantities of particulate low‐temperature pyrogenic carbon reach the Atlantic Ocean via the Amazon River. Global Biogeochemical Cycles, 35(9). doi:10.1029/2021GB006990

Ivarsson, M, Bach, W, Broman, C, Neubeck, A and Bengtson, S (2018) Fossilized life in subseafloor ultramafic rocks. Geomicrobiology Journal, 35(6). 460-467. doi:10.1080/01490451.2017.1370517

Koebrich, MI, Baumann, KH and Fischer, G (2015) Seasonal and inter-annual dynamics of coccolithophore fluxes from the upwelling region off Cape Blanc, NW Africa. Journal of Micropalaeontology, 35. 103-116. doi:10.1144/jmpaleo2014-024

Marcon, Y, Sahling, H, Allais, AG, Bohrmann, G and Olu, K (2014) Distribution and temporal variation of mega-fauna at the Regab pockmark (Northern Congo Fan), based on a comparison of videomosaics and geographic information systems analyses. Marine Ecology, 35. 77-95. doi:10.1111/maec.12056 PANGAEA Supplementary Data

Murshed, MM, Klapp, SA, Enzmann, F, Szeder, T, Huthwelker, T, Stampanoni, M, Marone, F, Hintermüller, C, Bohrmann, G, Kuhs, WF and Kersten, M (2008) Natural gas hydrate investigations by synchrotron X-ray cryo-tomographic microscopy (SRXCTM). Geophysical Research Letters, 35. L23612. doi:10.1029/2008GL035460

Versteegh, GJM, Blokker, P, Wood, GD, Collinson, ME, Sinninghe Damsté, JS and de Leeuw, JW (2004) An example of oxidative polymerization of unsaturated fatty acids as a preservation pathway for dinoflagellate organic matter. Organic Geochemistry, 35(10). 1129-1139. doi:10.1016/j.orggeochem.2004.06.012

349

Inagaki, F, Hinrichs, KU, Kubo, Y, Bowles, MW, Heuer, VB, Hong, WL, Hoshino, T, Ijiri, A, Imachi, H, Ito, M, Kaneko, M, Lever, MA, Lin, YS, Methe, BA, Morita, S, Morono, Y, Tanikawa, W, Bihan, M, Bowden, SA, Elvert, M, Glombitza, C, Gross, D, Harrington, GJ, Hori, T, Li, K, Limmer, D, Liu, CH, Murayama, M, Ohkouchi, N, Ono, S, Park, YS, Phillips, SC, Prieto-Mollar, X, Purkey, M, Riedinger, N, Sanada, Y, Sauvage, J, Snyder, G, Susilawati, R, Takano, Y, Tasumi, E, Terada, T, Tomaru, H, Trembath-Reichert, E, Wang, DT and Yamada, Y (2015) Exploring deep microbial life in coal-bearing sediment down to 2.5 km below the ocean floor. Science, 349(6246). 420-424. doi:10.1126/science.aaa6882 PANGAEA Supplementary Data

348

Breuer, C and Pichler, T (2013) Arsenic in marine hydrothermal fluids. Chemical Geology, 348. 2-14. doi:10.1016/j.chemgeo.2012.10.044

Bundschuh, J and Pichler, T (2013) Arsenic in marine hydrothermal systems: Source, fate and environmental implications. Chemical Geology, 348. 1. doi:10.1016/j.chemgeo.2012.11.002

Price, RE, London, J, Wallschläger, D, Ruiz-Chancho, MJ and Pichler, T (2013) Enhanced bioaccumulation and biotransformation of As in coral reef organisms surrounding a marine shallow-water hydrothermal vent system. Chemical Geology, 348. 48-55. doi:10.1016/j.chemgeo.2012.02.023

Price, RE, Savov, I, Planer-Friedrich, B, Bühring, SI, Amend, J and Pichler, T (2013) Processes influencing extreme As enrichment in shallow-sea hydrothermal fluids of Milos Island, Greece. Chemical Geology, 348. 15-26. doi:10.1016/j.chemgeo.2012.06.007

Ruiz-Chancho, MJ, Pichler, T and Price, RE (2013) Arsenic occurrence and speciation in Cyclope neritea, a gastropod inhabiting the arsenic-rich marine shallow-water hydrothermal system off Milos Island, Greece. Chemical Geology, 348. 56-64. doi:10.1016/j.chemgeo.2012.05.017

Wang, DT, Gruen, DS, Lollar, BS, Hinrichs, KU, Stewart, LC, Holden, JF, Hristov, AN, Pohlman, JW, Morrill, PL, Könneke, M, Delwiche, KB, Reeves, EP, Sutcliffe, CN, Ritter, DJ, Seewald, JS, McIntosh, JC, Hemond, HF, Kubo, MD, Cardace, D, Hoehler, TM and Ono, S (2015) Nonequilibrium clumped isotope signals in microbial methane. Science, 348(6233). 428-431. doi:10.1126/science.aaa4326

347

Römer, M, Sahling, H, Pape, T, dos Santos Ferreira, C, Wenzhöfer, F, Boetius, A and Bohrmann, G (2014) Methane fluxes and carbonate deposits at a cold seep area of the Central Nile Deep Sea Fan, Eastern Mediterranean Sea. Marine Geology, 347. 27-42. doi:10.1016/j.margeo.2013.10.011 PANGAEA Supplementary Data

344

Bowles, MW, Mogollón, JM, Kasten, S, Zabel, M and Hinrichs, KU (2014) Global rates of marine sulfate reduction and implications for sub-sea-floor metabolic activities. Science, 344(6186). 889-891. doi:10.1126/science.1249213

Friedrich, MW and Finster, KW (2014) How sulfur beats iron. Science, 344(6187). 974-975. doi:10.1126/science.1255442

343

Berndt, C, Feseker, T, Treude, T, Krastel, S, Liebetrau, V, Niemann, H, Bertics, VJ, Dumke, I, Dunnbier, K, Ferre, B, Graves, C, Gross, F, Hissmann, K, Hühnerbach, V, Krause, S, Lieser, K, Schauer, J and Steinle, L (2014) Temporal constraints on hydrate-controlled methane seepage off Svalbard. Science, 343(6168). 284-287. doi:10.1126/science.1246298 PANGAEA Supplementary Data

34-35

García-Ruiz, JM, van Zuilen, MA and Bach, W (2020) Mineral self-organization on a lifeless planet. Physics of Life Reviews, 34-35. 62-82. doi:10.1016/j.plrev.2020.01.001

34

Degen, R, Vedenin, A, Gusky, M, Boetius, A and Brey, T (2015) Patterns and trends of macrobenthic abundance, biomass and production in the deep Arctic Ocean. Polar Research, 34(0). doi:10.3402/polar.v34.24008 PANGAEA Supplementary Data

Inthorn, M, Wagner, T, Scheeder, G and Zabel, M (2006) Lateral transport controls distribution, quality and burial of organic matter along continental slopes in high-productivity areas. Geology, 34(3). 205-208. doi:10.1130/G22153.1 PANGAEA Supplementary Data

Klapp, SA, Klein, H and Kuhs, WF (2007) First determination of gas hydrate crystallite size distributions using high-energy synchrotron radiation. Geophysical Research Letters, 34. L13608. doi:10.1029/2006GL029134 PANGAEA Supplementary Data

Reyes, C, Schneider, D, Thürmer, A, Kulkarni, A, Lipka, M, Sztejrenszus, SY, Böttcher, ME, Daniel, R and Friedrich, MW (2017) Potentially active iron, sulfur, and sulfate reducing bacteria in Skagerrak and Bothnian Bay sediments. Geomicrobiology Journal, 34(10). 840-850. doi:10.1080/01490451.2017.1281360

Salman, V, Amann, R, Girnth, AC, Polerecky, L, Bailey, JV, Hogslund, S, Jessen, GL, Pantoja, S and Schulz-Vogt, HN (2011) A single-cell sequencing approach to the classification of large, vacuolated sulfur bacteria. Systematic and Applied Microbiology, 34(4). 243-259. doi:10.1016/j.syapm.2011.02.001

Zhao, M, Dupont, LM, Eglinton, G and Teece, M (2003) n-Alkane and pollen reconstruction of terrestrial climate and vegetation for N.W. Africa over the last 160 kyr. Organic Geochemistry, 34(1). 131-143. doi:10.1016/S0146-6380(02)00142-0

Zink, KG, Wilkes, H, Disko, U, Elvert, M and Horsfield, B (2003) Intact phospholipids - microbial life markers in marine deep subsurface sediments. Organic Geochemistry, 34(6). 755-769. doi:10.1016/S0146-6380(03)00041-X PANGAEA Supplementary Data

339

Boetius, A, Albrecht, S, Bakker, K, Bienhold, C, Felden, J, Fernández-Méndez, M, Hendricks, S, Katlein, C, Lalande, C, Krumpen, T, Nicolaus, M, Peeken, I, Rabe, B, Rogacheva, A, Rybakova, E, Somavilla Cabrillo, R, Wenzhöfer, F and ARK-XXVII/3 Shipboard Scientific Party (2013) Export of algal biomass from the melting Arctic sea ice. Science, 339. 1430-1432. doi:10.1126/science.1231346 PANGAEA Supplementary Data

Fink, HG, Wienberg, C, De Pol-Holz, R, Wintersteller, P and Hebbeln, D (2013) Cold-water coral growth in the Alboran Sea related to high productivity during the Late Pleistocene and Holocene. Marine Geology, 339. 71-82. doi:10.1016/j.margeo.2013.04.009 PANGAEA Supplementary Data

Lever, MA, Rouxel, OJ, Alt, JC, Shimizu, N, Ono, S, Coggon, RM, Shanks, WC, Lapham, L, Elvert, M, Prieto-Mollar, X, Hinrichs, KU, Inagaki, F and Teske, AP (2013) Evidence for microbial carbon and sulfur cycling in deeply buried ridge flank basalt. Science, 339(6125). 1305-1308. doi:10.1126/science.1229240 PANGAEA Supplementary Data

Versteegh, GJM and Riboulleau, A (2010) An organic geochemical perspective on terrestrialisation. In: Vecoli, M, Clément, G and Meyer-Berthaud, B (eds.) The Terrestrialization Process: Modelling Complex Interactions at the Biosphere - Geosphere Interface. Geological Society of London, Special Publications, 11-36. doi:10.1144/SP339.3

333-33

Lippold, J, Mulitza, S, Mollenhauer, G, Weyer, S, Heslop, D and Christl, M (2012) Boundary scavening at the East Atlantic margin does not negate use of Pa-231/Th-230 to trace Atlantic overturning. Earth and Planetary Science Letters, 333-33. 317-331. doi:10.1016/j.epsl.2012.04.005

33

Arnds, J, Knittel, K, Buck, U, Winkel, M and Amann, R (2010) Development of a 16S rRNA-targeted probe set for Verrucomicrobia and its application for fluorescence in situ hybridization in a humic lake. Systematic and Applied Microbiology, 33(3). 139-148. doi:10.1016/j.syapm.2009.12.005 PANGAEA Supplementary Data

Bach, W, Paulick, H, Garrido, CJ, Ildefonse, B, Meurer, WP and Humphris, SE (2006) Unraveling the sequence of serpentinization reactions: petrography, mineral chemistry, and petrophysics of serpentinites from MAR 15°N (ODP Leg 209, Site 1274). Geophysical Research Letters, 33. L13306. doi:10.1029/2006GL025681

Fischer, G, Romero, OE, Toby, E, Iversen, MH, Donner, B, Mollenhauer, G, Nowald, N, Ruhland, G, Klann, M, Hamady, B and Wefer, G (2019) Changes in the dust‐influenced biological carbon pump in the Canary Current System: implications from a coastal and an offshore sediment trap record off Cape Blanc, Mauritania. Global Biogeochemical Cycles, 33(8). 1100-1128. doi:10.1029/2019GB006194

Himmler, T, Haley, BA, Torres, ME, Klinkhammer, GP, Bohrmann, G and Peckmann, J (2013) Rare earth element geochemistry in cold-seep pore waters of Hydrate Ridge, northeast Pacific Ocean. Geo-Marine Letters, 33(5). 369-379. doi:10.1007/s00367-013-0334-2 PANGAEA Supplementary Data

Serrano, W, Amann, R, Rosselló-Móra, R and Fischer, U (2010) Evalution of the use of multilocus sequence analysis (MLSA) to resolve taxonomic conflicts within the genus Marichromatium. Systematic and Applied Microbiology, 33(3). 116-121. doi:10.1016/J.syapm.2009.12.003

Simonato, F, Gomez-Pereira, PR, Fuchs, BM and Amann, R (2010) Bacterioplankton diversity and community composition in the Southern Lagoon of Venice. Systematic and Applied Microbiology, 33(3). 128.138. doi:10.1016/j.syapm.2009.12.006 PANGAEA Supplementary Data

Teichert, BMA, Gussone, N, Eisenhauer, A and Bohrmann, G (2005) Clathrites - Archives of near-seafloor pore fluid evolution (d44/40Ca, d13C, d18O) in gas hydrate environments. Geology, 33(3). 213-216. doi:10.1130/G21317.1 PANGAEA Supplementary Data

Yasuhara, M, Huang, HH, Hull, P, Rillo, M, Condamine, F, Tittensor, D, Kučera, M, Costello, M, Finnegan, S, O’Dea, A, Hong, Y, Bonebrake, T, McKenzie, R, Doi, H, Wei, CL, Kubota, Y and Saupe, E (2020) Time machine biology: Cross-timescale integration of ecology, evolution, and oceanography. Oceanography, 33(2). doi:10.5670/oceanog.2020.225

326

Sepúlveda, J, Wendler, J, Summons, RE and Hinrichs, KU (2009) Rapid Resurgence of Marine Productivity After the Cretaceous-Paleogene Mass Extinction. Science, 326. 129-132. doi:10.1126/science.1176233

324

Boetius, A and Joye, SB (2009) Thriving in Salt. Science, 324(5934). 1523-1525. doi:10.1126/science.1172979

323

Thal, J, Tivey, M, Yoerger, DR and Bach, W (2016) Subaqueous cryptodome eruption, hydrothermal activity and related seafloor morphologies on the andesitic North Su volcano. Journal of Volcanology and Geothermal Research, 323. 80-96. doi:10.1016/j.jvolgeores.2016.04.041

Ziebis, W, McManus, J, Ferdelman, TG, Schmidt-Schierhorn, F, Bach, W, Muratli, JM, Edwards, KJ and Villinger, H (2012) Interstitial fluid chemistry of sediments underlying the North Atlantic gyre and the influence of subsurface fluid flow. Earth and Planetary Science Letters, 323. 79-91. doi:10.1016/j.epsl.2012.01.018

320

Duce, RA, LaRoche, J, Altieri, K, Arrigo, KR, Baker, AR, Capone, DG, Cornell, S, Dentener, F, Galloway, J, Ganeshram, RS, Geider, R, Jickells, T, Kuypers, MMM, Langlois, R, Liss, PS, Liu, SM, Middelburg, JJ, Moore, CM, Nickovic, S, Oschlies, A, Pedersen, TF, Prospero, J, Schlitzer, R and et al (2008) Impacts of Atmospheric Anthropogenic Nitrogen on the Open Ocean. Science, 320(5878). 893-897. doi:10.1126/science.1150369

32

D'Hondt, S, Inagaki, F, Orcutt, B and Hinrichs, KU (2019) IODP advances in the understanding of subseafloor life. Oceanography, 32(1). 198-207. doi:10.5670/oceanog.2019.146

Donis, D, Holtappels, M, Noss, C, Cathalot, C, Hancke, K, Polsenaere, P, Wenzhöfer, F, Lorke, A, Meysman, FJR, Glud, RN and McGinnis, DF (2015) An assessment of the precision and confidence of aquatic eddy correlation measurements. Journal of Atmospheric and Oceanic Technology, 32(3). 642-655. doi:10.1175/JTECH-D-14-00089.1

Heuer, VB, Lever, MA, Morono, Y and Teske, A (2019) The limits of life and the biosphere in Earth’s interior. Oceanography, 32(1). 208-211. doi:10.5670/oceanog.2019.147

Kasten, S, Nöthen, K, Hensen, C, Spieß, V, Blumenberg, M and Schneider, RR (2012) Gas hydrate decomposition recorded by authigenic barite at pockmark sites of the northern Congo Fan. Geo-Marine Letters, 32. 515-524. doi:10.1007/s00367-012-0288-9 PANGAEA Supplementary Data

Klapp, SA, Enzmann, F, Walz, P, Huthwelker, T, Tuckermann, J, Schwarz, JO, Pape, T, Peltzer, ET, Mokso, R, Wangner, D, Marone, F, Kersten, M, Bohrmann, G, Kuhs, WF, Stampanoni, M and Brewer, PG (2012) Microstructure characteristics during hydrate formation and dissociation revealed by X-ray tomographic microscopy. Geo-Marine Letters, 32. 555-562. doi:10.1007/s00367-012-0276-0

Zühlsdorff, L and Spieß, V (2004) Three-dimensional seismic characterization of a venting site reveals compelling indications of natural hydraulic fracturing. Geology, 32(2). 101-104. doi:10.1130/G19993.1

319-32

Kallweit, W, Mollenhauer, G and Zabel, M (2012) Multi-proxy reconstruction of terrigenous input and sea-surface temperatures in the eastern Gulf of Guinea over the last ~35 ka. Marine Geology, 319-32. 35-46. doi:10.1016/j.margeo.2012.06.007 PANGAEA Supplementary Data

319

Klapp, SA, Klein, H and Kuhs, WF (2009) Gas hydrate crystallite size investigations with high-energy synchrotron radiation. In: Long, D, Lovell, MA, Rees, JG and Rochelle, CA (eds.) Sediment-Hosted Gas Hydrates: New Insights on Natural and Synthetic Systems. Special Publications, 319. The London Geological Society, London, 161-170. doi:10.1144/SP319.13 PANGAEA Supplementary Data

Römer, M, Sahling, H, Pape, T, Bahr, A, Feseker, T, Wintersteller, P and Bohrmann, G (2012) Geological control and magnitude of methane ebullition from a high-flux seep area in the Black Sea - the Kerch seep area. Marine Geology, 319. 57-74. doi:10.1016/j.margeo.2012.07.005 PANGAEA Supplementary Data

317

Berndmeyer, C, Birgel, D, Brunner, B, Wehrmann, LM, Jöns, N, Bach, W, Arning, ET, Föllmi, KB and Peckmann, JL (2012) The influence of bacterial activity on phosphorite formation in the Miocene Monterey Formation, California. Palaeogeography, Palaeoclimatology, Palaeoecology, 317. 171-181. doi:10.1016/j.palaeo.2012.01.004

314

Jørgensen, BB and d'Hondt, SL (2006) A starving majority deep beneath the seafloor. Science, 314(5801). 932-934. doi:10.1126/science.1133796

312

Neulinger, SC, Sahling, H, Süling, J and Imhoff, JF (2006) Presence of two phylogenetically distinct groups in the deep-sea mussel Acharax (Mollusca, Bibalvia, Solemyidae). Marine Ecology Progress Series, 312. 161-168. doi:10.3354/meps312161

311

Bach, W, Rosner, M, Jöns, N, Rausch, S, Robinson, LF, Paulick, H and Erzinger, JA (2011) Carbonate veins trace seawater circulation during exhumation and uplift of mantle rocks: Results from ODP Leg 209. Earth and Planetary Science Letters, 311(3-4). 242-252. doi:10.1016/j.epsl.2011.09.021 PANGAEA Supplementary Data

Bahr, A, Bohrmann, G and Teichert, BMA (2008) Data Report: bulk mineralogical composition of Cascadia margin sediments, IODP Expedition 311. In: Riedel, M, Collett, TS, Malone, MJ and Expedition 311 Scientists (eds.) Proceedings of the Integrated Ocean Drilling Program. Integrated Ocean Drilling Program Management International, Inc., Washington, DC. doi:10.2204/iodp.proc.311.201.2008

31

Buck-Wiese, H, Fanuel, M, Liebeke, M, Le Mai Hoang, K, Pardo-Vargas, A, Seeberger, PH, Hehemann, JH, Rogniaux, H, Jackson, GP and Ropartz, D (2020) Discrimination of β-1,4- and β-1,3-linkages in native Oligosaccharides via charge transfer dissociation mass spectrometry. Journal of the American Society for Mass Spectrometry, 31(6). 1249-1259. doi:10.1021/jasms.0c00087

Böckmann, S, Koch, F, Meyer, B, Pausch, F, Iversen, MH, Driscoll, R, Laglera, LM, Hassler, C and Trimborn, S (2021) Salp fecal pellets release more bioavailable iron to Southern Ocean phytoplankton than krill fecal pellets. Current Biology, 31(13). 2737-2746.e3. doi:10.1016/j.cub.2021.02.033

Dong, A, Zhai, S, Zabel, M, Yu, Z, Zhang, H and Liu, F (2012) Heavy metals in Changjiang estuarine and offshore sediments: responding to human activities. Acta Oceanologica Sinica, 31(2). 88-101. doi:10.1007/s13131-012-0195-y

Jessen, GL, Pantoja, S, Gutierrez, MA, Quiñones, R, Gonzalez, RR, Sellanes, J, Kellermann, MY and Hinrichs, KU (2011) Methane in shallow cold seeps at Mocha Island off central Chile. Continental Shelf Research, 31(6). 574-581. doi:10.1016/j.csr.2010.12.012

Lazareva, O and Pichler, T (2011) Evaluating Complex Hydrogreological Settings in a Constructed Wetland: An Isotopic/Chemical Mass Balance Approach. Wetlands, 31(3). 521-534. doi:10.1007/s13157-011-0173-8

Marcon, Y, Sahling, H, MacDonald, I, Wintersteller, P, dos Santos Ferreira, C and Bohrmann, G (2018) Slow volcanoes: The intriguing similarities between marine asphalt and basalt lavas. Oceanography, 31(2). 194-205. doi:10.5670/oceanog.2018.202 PANGAEA Supplementary Data

Quintana, CO, Yoshinaga, MY and Sumida, PY (2012) Benthic responses to organic matter variation in a subtropical coastal area off SE Brazil. Marine Ecology-An Evolutionary Perspective, 31(3). 457-472. doi:10.1111/j.1439-0485.2010.00362.x

Rosner, M, Ball, LA, Peucker-Ehrenbrink, B, Blusztajn, JS, Bach, W and Erzinger, JA (2007) A Simplified, Accurate and Fast Method for Lithium Isotope Analysis of Rocks and Fluids, and d7Li Values of Seawater and Rock Reference Materials. Geostandards and Geoanalytical Research, 31(2). 77-88. doi:10.1111/j.1751-908X.2007.00843.x

Schneider von Deimling, J, Rehder, G, Greinert, J, McGinnis, DF, Boetius, A and Linke, P (2011) Quantification of seep-related methane gas emissions at Tommeliten, North Sea. Continental Shelf Research, 31(7-8). 867-878. doi:10.1016/j.csr.2011.02.012

Sichert, A, Le Gall, S, Klau, LJ, Laillet, B, Rogniaux, H, Aachmann, FL and Hehemann, JH (2021) Ion-exchange purification and structural characterization of five sulfated fucoidans from brown algae. Glycobiology, 31(4). 352-357. doi:10.1093/glycob/cwaa064

Torres, ME, Bohrmann, G, Dubé, TE and Poole, FG (2003) Formation of modern and Paleozoic barite at continental margin methane seeps. Geology, 31(10). 897-900. doi:10.1130/G19652.1

Torres, ME, Teichert, BMA, Tréhu, AM, Borowski, WS and Tomaru, H (2004) Relationship of pore water freshening to accretionary processes in the Cascadia margin: Fluid sources and gas hydrate abundance. Geophysical Research Letters, 31(22). 1-4. doi:10.1029/2004GL021219 PANGAEA Supplementary Data

309

Lange, I, Toro, M, Arvidson, RS, Kurganskaya, I and Lüttge, A (2021) The role of crystal heterogeneity in alkali feldspar dissolution kinetics. Geochimica et Cosmochimica Acta, 309. 329-351. doi:10.1016/j.gca.2021.06.032

Romero-Sarmiento, MF, Riboulleau, A, Vecoli, M, Laggoun-Défarge, F and Versteegh, GJM (2011) Aliphatic and aromatic biomarkers from Carboniferous coal deposits at Dunbar (East Lothian, Scotland): Palaeobotanical and palaeoenvironmental significance. Palaeogeography, Palaeoclimatology, Palaeoecology, 309(3-4). 309-326. doi:10.1016/j.palaeo.2011.06.015

307

Pape, T, Bahr, A, Klapp, SA, Abegg, F and Bohrmann, G (2011) High-intensity gas seepage causes rafting of shallow gas hydrates in the southeastern Black Sea. Earth and Planetary Science Letters, 307. 35-46. doi:10.1016/j.epsl.2011.04.030 PANGAEA Supplementary Data

Schulz, HN and Schulz, HD (2005) Large sulfur bacteria and the formation of phosphorite. Science, 307. 416-418. doi:10.1126/science.1103096 PANGAEA Supplementary Data

Zhang, YG, Zhang, CL, Liu, XL, Li, L, Hinrichs, KU and Noakes, JE (2011) Methane Index: A tetraether archaeal lipid biomarker indicator for detecting the instability of marine gas hydrates. Earth and Planetary Science Letters, 307(3-4). 525-534. doi:10.1016/j.epsl.2011.05.031 PANGAEA Supplementary Data

Zhu, QZ, Elvert, M, Meador, TB, Becker, KW, Heuer, VB and Hinrichs, KU (2021) Stable carbon isotopic compositions of archaeal lipids constrain terrestrial, planktonic, and benthic sources in marine sediments. Geochimica et Cosmochimica Acta, 307. 319-337. doi:10.1016/j.gca.2021.04.037

306

d'Hondt, SL, Jørgensen, BB, Miller, JL, Batzke, A, Blake, DR, Cragg, BA, Cypionka, H, Dickens, GR, Ferdelman, TG, Hinrichs, KU, Holm, NG, Mitterer, RM, Spivack, AJ, Wang, G, Bekins, BA, Engelen, B, Ford, K, Gettemy, G, Rutherford, SD, Sass, H, Skilbeck, CG, Aiello, IW, Guerin, G, House, CH, Meister, P, Nähr, TH, Niitsuma, S, Parkes, J, Schippers, A, Smith, DC, Teske, AP, Wiegel, J, Padilla, CN and Acosta, JLS (2004) Distributions of microbial activities in deep subseafloor sediments. Science, 306(5705). 2216-2221. doi:10.1126/science.1101155

304

Heindel, K, Birgel, D, Brunner, B, Thiel, V, Westphal, H, Gischler, E, Ziegenbalg, SB, Cabioch, G, Sjovall, P and Peckmann, JL (2012) Post-glacial microbialite formation in coral reefs of te Pacific, Atlantic, and Indian Oceans. Chemical Geology, 304. 117-130. doi:10.1016/j.chemgeo.2012.02.009

MacDonald, IR, Bohrmann, G, Escobar, E, Abegg, F, Blanchon, P, Blinova, VN, Brueckmann, W, Drews, M, Eisenhauer, A, Han, X, Heeschen, KU, Meier, F, Mortera, C, Naehr, T, Orcutt, B, Bernard, B, Brroks, J and de Farágo, M (2004) Asphalt volcanism and chemosynthetic life, Campache Knolls, Gulf of Mexico. Science, 304(5673). 999-1002. doi:10.1126/science.1097154 PANGAEA Supplementary Data

302

Vogt, C (2009) Data report: semiquantitative determination of detrital input to ACEX sites based on bulk sample X-ray diffraction data. In: Backman, J, Moran, K, McInroy, DB, Mayer, LA and Expedition 302 Scientists (eds.) Proceedings of the Integrated Ocean Drilling Program. Integrated Ocean Drilling Program Management International, Inc. doi:10.2204/iodp.proc.302.203.2009 PANGAEA Supplementary Data

300

Leider, A, Hinrichs, KU, Mollenhauer, G and Versteegh, GJM (2010) Core-top calibration of the lipid-based U-37(K)' and TEX86 temperature proxies on the southern Italian shelf (SW Adriatic Sea, Gulf of Taranto). Earth and Planetary Science Letters, 300(1-2). 112-124. doi:10.1016/j.epsl.2010.09.042 PANGAEA Supplementary Data

30

Bohrmann, G and Jørgensen, BB (2010) Contributions from the 9th International Conference on Gas in Marine Sediments, University of Bremen, 15-19 September 2008. Geo-Marine Letters, 30(3-4). 151-155. doi:10.1007/s00367-010-0208-9

Heeschen, KU, Tréhu, AM, Collier, RW, Suess, E and Rehder, G (2003) Distribution and height of methane bubble plumes on the Cascadia Margin characterized acoustic imaging. Geophysical Research Letters, 30(12). 1643. doi:10.1029/2003GL016974

Kinnaman, FS, Kimball, J, Busso, L, Birgel, D, Ding, H, Hinrichs, KU and Valentine, DL (2010) Gas flux and carbonate occurrence at a shallow seep of thermogenic natural gas. Geo-Marine Letters, 30(3-4). 355-365. doi:10.1007/s00367-010-0184-0

Pape, T, Kasten, S, Zabel, M, Bahr, A, Abegg, F, Hohnberg, HJ and Bohrmann, G (2010) Gas hydrates in shallow deposits of the Amsterdam mud volcano, Anaximander Mountains, Northeastern Mediterranean Sea. Geo-Marine Letters, 30(3-4). 187-206. doi:10.1007/s00367-010-0197-8 PANGAEA Supplementary Data

Pudlo, NA, Pereira, GV, Parnami, J, Cid, M, Markert, S, Tingley, JP, Unfried, F, Ali, A, Varghese, NJ, Kim, KS, Campbell, A, Urs, K, Xiao, Y, Adams, R, Martin, D, Bolam, DN, Becher, D, Eloe-Fadrosh, EA, Schmidt, TM, Abbott, DW, Schweder, T, Hehemann, JH and Martens, EC (2022) Diverse events have transferred genes for edible seaweed digestion from marine to human gut bacteria. Cell Host & Microbe, 30(3). 314-328.e11. doi:10.1016/j.chom.2022.02.001

Seiter, K, Hensen, C and Zabel, M (2010) Coupling of benthic oxygen uptake and silica release: implications for estimating biogenic particle fluxes to the sea floor. Geo-Marine Letters, 30(5). 493-509. doi:10.1007/s00367-010-0209-8

Serna, A, Pätsch, J, Dähnke, K, Wiesner, MG, Hass, HC, Zeiler, M, Hebbeln, D and Emeis, KC (2010) History of anthropogenic nitrogen input to the German Bight/SE North Sea as reflected by nitrogen isotopes in surface sediments, sediment cores and hindcast models. Continental Shelf Research, 30(15). 1626-1638. doi:10.1016/j.csr.2010.06.010

Sogin, EM, Leisch, N and Dubilier, N (2020) Chemosynthetic symbioses. Current Biology, 30(19). R1137-R1142. doi:10.1016/j.cub.2020.07.050

Toner, BM, Lesniewski, RA, Marlow, JJ, Briscoe, LJ, Santelli, CM, Bach, W, Orcutt, BN and Edwards, KJ (2013) Mineralogy Drives Bacterial Biogeography of Hydrothermally Inactive Seafloor Sulfide Deposits. Geomicrobiology Journal, 30(4). 313-326. doi:10.1080/01490451.2012.688925

Versteegh, GJM and Zonneveld, KAF (2002) Use of selective degradation to separate preservation from productivity. Geology, 30(7). 615-618. doi:10.1130/0091-7613(2002)030<0615:UOSDTS>2.0.CO;2

3

Aspetsberger, F, Zabel, M, Ferdelman, TG, Struck, U, Mackensen, A, Ahke, A and Witte, U (2007) Instantaneous benthic response to different organic matter quality: In situ experiments in the Benguela Upwelling System. Marine Biological Research, 3(5). 342-356. doi:10.1080/17451000701632885

Eglinton, TI, Eglinton, G, Dupont, LM, Sholkovitz, ER, Montluçon, D and Reddy, CM (2002) Composition, age, and provenance of organic matter in NW African dust over the Atlantic Ocean. Geochemistry Geophysics Geosystems, 3(8). 1-27. doi:10.1029/2001GC000269

Elvert, M, Hopmans, EC, Treude, T, Boetius, A and Suess, E (2005) Spatial variations of methanotrophic consortia at cold methane seeps: Implications from a high-resolution molecular and isotopic approach. Geobiology, 3(3). 195-209. doi:10.1111/j.1472-4669.2005.00051.x PANGAEA Supplementary Data

Goldhammer, T, Brüchert, V, Ferdelman, TG and Zabel, M (2010) Microbial sequestration of phosphorus in anoxic upwelling sediments. Nature Geoscience, 3(8). 557-561. doi:10.1038/ngeo913 PANGAEA Supplementary Data

Hoshino, Y, Poshibaeva, A, Meredith, W, Snape, C, Poshibaev, V, Versteegh, GJM, Kuznetsov, N, Leider, A, van Maldegem, L, Neumann, M, Naeher, S, Moczydłowska, M, Brocks, JJ, Jarrett, AJ, Tang, Q, Xiao, S, McKirdy, D, Das, SK, Alvaro, JJ, Sansjofre, P and Hallmann, C (2017) Cryogenian evolution of stigmasteroid biosynthesis. Science Advances, 3(9). e1700887. doi:10.1126/sciadv.1700887

Kleint, C, Hawkes, JA, Sander, SG and Koschinsky, A (2016) Voltammetric investigation of hydrothermal iron speciation. Frontiers in Marine Science, 3. doi:10.3389/fmars.2016.00075 PANGAEA Supplementary Data

Moraru, C, Moraru, G, Fuchs, BM and Amann, R (2011) Concepts and software for a rational design of polynucleotide probes. Environmental Microbiology Reports, 3(1). 69-78. doi:10.1111/j.1758-2229.2010.00189.x

Petersen, J and Dubilier, N (2014) Gene swapping in the dead zone. eLife, 3. doi:10.7554/eLife.04600

Seeberg-Elverfeldt, J, Schlüter, M, Feseker, T and Kölling, M (2005) Rhizon sampling of pore waters near the sediment/water interface of aquatic systems. Limnology and Oceanography: Methods, 3. 361-371. doi:10.4319/lom.2005.3.361 PANGAEA Supplementary Data

Sievert, SM, Bühring, SI, Gulmann, LK, Hinrichs, KU, Pop Ristova, P and Gomez-Saez, GV (2022) Fluid flow stimulates chemoautotrophy in hydrothermally influenced coastal sediments. Communications Earth & Environment, 3(1). doi:10.1038/s43247-022-00426-5

Takano, Y, Chikaraishi, Y, Ogawa, NO, Nomaki, H, Morono, Y, Inagaki, F, Kitazato, H, Hinrichs, KU and Ohkouchi, N (2010) Sedimentary membrane lipids recycled by deep-sea benthic archaea. Nature Geoscience, 3(12). 858-861. doi:10.1038/NGEO983

Thiele, S, Fuchs, BM and Amann, RI (2011) Identification of microorganisms using the ribosomal RNA approach and flourescence in situ hybridization. In: Frimmel, F and Wilderer, P (eds.) Treatise on Water Science. Oxford Academic Press, Elsevier, Amsterdam, The Netherlandes, 171-189.

Usbeck, R, Rutgers van der Loeff, MM, Hoppema, M and Schlitzer, R (2002) Shallow remineralization in the Weddell Gyre. Geochemistry Geophysics Geosystems, 3(1). doi:10.1029/2001GC000182

299

Hinrichs, KU, Hmelo, LR and Sylva, SP (2003) Molecular fossil record of elevated methane levels in Late Pleistocene coastal waters. Science, 299(5610). 1214-1217. doi:10.1126/science.1079601

Klapp, SA, Murshed, MM, Pape, T, Klein, H, Bohrmann, G, Brewer, PG and Kuhs, WF (2010) Mixed gas hydrate structures at the Chapopote Knoll, southern Gulf of Mexico. Earth and Planetary Science Letters, 299(1-2). 207-217. doi:10.1016/j.epsl.2010.09.001

297

Bäumgen, M, Dutschei, T, Bartosik, D, Suster, C, Reisky, L, Gerlach, N, Stanetty, C, Mihovilovic, MD, Schweder, T, Hehemann, JH and Bornscheuer, UT (2021) A new carbohydrate-active oligosaccharide dehydratase is involved in the degradation of ulvan. Journal of Biological Chemistry, 297(4). 101210. doi:10.1016/j.jbc.2021.101210

295

Kraal, P, Slomp, CP, Forster, A and Kuypers, MMM (2010) Phosphorus cycling from the margin to abyssal depths in the proto-Atlantic during oceanic anoxic event 2. Palaeogeography, Palaeoclimatology, Palaeoecology, 295(1-2). 42-54. doi:10.1016/j.palaeo.2010.05.014

294

Kretschmer, S, Geibert, W, Rutgers van der Loeff, MM and Mollenhauer, G (2010) Grain size effects on Th-230 (xs) inventories in opal-rich and carbonate-rich marine sediments. Earth and Planetary Science Letters, 294(1-2). 131-142. doi:10.1016/j.epsl.2010.03.021 PANGAEA Supplementary Data

Sherwood Lollar, B, Heuer, VB, McDermott, J, Tille, S, Warr, O, Moran, JJ, Telling, J and Hinrichs, KU (2021) A window into the abiotic carbon cycle – Acetate and formate in fracture waters in 2.7 billion year-old host rocks of the Canadian Shield. Geochimica et Cosmochimica Acta, 294. 295-314. doi:10.1016/j.gca.2020.11.026

293

Ono, S, Rhim, JH, Gruen, DS, Taubner, H, Kölling, M and Wegener, G (2021) Clumped isotopologue fractionation by microbial cultures performing the anaerobic oxidation of methane. Geochimica et Cosmochimica Acta, 293. 70-85. doi:10.1016/j.gca.2020.10.015

292

Badur, AH, Plutz, MJ, Yalamanchili, G, Jagtap, SS, Schweder, T, Unfried, F, Markert, S, Polz, MF, Hehemann, JH and Rao, CV (2017) Exploiting fine-scale genetic and physiological variation of closely related microbes to reveal unknown enzyme functions. Journal of Biological Chemistry, 292(31). 13056-13067. doi:10.1074/jbc.M117.787192

Ziegenbalg, SB, Birgel, D, Hoffmann-Sell, L, Pierre, C, Rouchy, JM and Peckmann, JL (2012) Anaerobic oxidation of methane in hypersaline Messinian environments revealed by C-13-depleted molecular fossils. Chemical Geology, 292. 140-148. doi:10.1016/j.chemgeo.2011.11.024

290

Kusch, S, Eglinton, TI, Mix, AC and Mollenhauer, G (2010) Timescales of lateral sediment transport in the Panama Basin as revealed by radiocarbon ages of alkenones, total organic carbon and foraminifera. Earth and Planetary Science Letters, 290(3-4). 340-350. doi:10.1016/j.epsl.2009.12.030 PANGAEA Supplementary Data

29

Dupré, S, Buffet, G, Mascle, J, Foucher, JP, Gauger, S, Boetius, A, Marfia, C, AsterX AUV Team, Quest ROV Team and BIONIL Scientific Party (2009) High-resolution mapping of large gas emitting mud volcanoes on the Egyptian continental margin (Nile Deep Sea Fan) by AUV surveys. Marine Geophysical Researches, 29(4). 275-290. doi:10.1007/s11001-009-9063-3 PANGAEA Supplementary Data

Meyer-Dombard, DR, Price, RE, Pichler, T and Amend, JP (2012) Prokaryotic Populations in Arsenic-Rich Shallow-Sea Hydrothermal Sediments of Ambitle Island, Papua New Guinea. Geomicrobiology Journal, 29(1). 1-17. doi:10.1080/01490451.2010.520073

Neuer, S, Davenport, R, Freudenthal, T, Wefer, G, Llinás, O, Rueda, MJ, Steinberg, DK and Karl, DM (2002) Differences in the biological carbon pump at three subtropical ocean sites. Geophysical Research Letters, 29(18). 1885. doi:10.1029/2002GL015393 PANGAEA Supplementary Data

Pape, T, Hoffmann, F, Quéric, NV, von Juterzenka, K, Reitner, J and Michaelis, W (2006) Dense populations of Archaea associated with the demosponge Tentorium semisuberites Schmidt, 1870 from Arctic deep-waters. Polar Biology, 29(8). 662-667. doi:10.1007/s00300-005-0103-4

Reitz, A, Hensen, C, Kasten, S, Funk, J and de Lange, GJ (2004) A combined geochemical and rock-magnetic investigation of a redox horizon at the last glacial/interglacial transition. Physics and Chemistry of the Earth, Special Issue, 29. 921-931. doi:10.1016/j.pce.2004.03.013

288

Franke, M, Geier, B, Hammel, JU, Dubilier, N and Leisch, N (2021) Coming together—symbiont acquisition and early development in deep-sea bathymodioline mussels. Proceedings of the Royal Society B: Biological Sciences, 288(1957). 20211044. doi:10.1098/rspb.2021.1044

287

Nöthen, K and Kasten, S (2011) Reconstructing changes in seep activity by means of pore water and solid phase Sr/Ca and Mg/Ca ratios in pockmark sediments of the Northern Congo Fan. Marine Geology, 287(1-4). 1-13. doi:10.1016/j.margeo.2011.06.008 PANGAEA Supplementary Data

Pohlman, JW, Kaneko, M, Heuer, VB, Coffin, RB and Whiticar, MJ (2009) Methane sources and production in the northern Cascadia margin gas hydrate system. Earth and Planetary Science Letters, 287(3-4). 504-512. doi:10.1016/j.epsl.2009.08.037 PANGAEA Supplementary Data

285

Mystkowska, AA, Robb, C, Vidal-Melgosa, S, Vanni, C, Fernandez-Guerra, A, Höhne, M and Hehemann, JH (2018) Molecular recognition of the beta-glucans laminarin and pustulan by a SusD-like glycan-binding protein of a marine Bacteroidetes. The FEBS Journal, 285(23). 4465-4481. doi:10.1111/febs.14674

Purnomo, BJ and Pichler, T (2014) Geothermal systems on the island of Java, Indonesia. Journal of Volcanology and Geothermal Research, 285. 47-59. doi:10.1016/j.jvolgeores.2014.08.004

284

Seah, BKB, Schwaha, T, Volland, JM, Huettel, B, Dubilier, N and Gruber-Vodicka, HR (2017) Specificity in diversity: single origin of a widespread ciliate-bacteria symbiosis. Proceedings of the Royal Society B: Biological Sciences, 284(1858). 20170764. doi:10.1098/rspb.2017.0764

Wehrmann, LM, Risgaard-Petersen, N, Schrum, HN, Walsh, EA, Huh, Y, Ikehara, M, Pierre, C, d'Hondt, SL, Ferdelman, TG, Ravelo, AC, Takahashi, K and Zarikian, CA (2011) Coupled organic and inorganic carbon cycling in the deep subseafloor sediment of the northeastern Bering Sea Slope (IODP Exp. 323). Chemical Geology, 284(3-4). 251-261. doi:10.1016/j.chemgeo.2011.03.002 PANGAEA Supplementary Data

283

Eickmann, B, Bach, W, Kiel, S, Reitner, J and Peckmann, JL (2009) Evidence for cryptoendolithic life in Devonian pillow basalts of Variscan orogens, Germany. Palaeogeography, Palaeoclimatology, Palaeoecology, 283. 120-125. doi:10.1016/j.palaeo.2009.09.006 PANGAEA Supplementary Data

282

Wehrmann, LM, Templer, SP, Brunner, B, Bernasconi, SM, Maignien, L and Ferdelman, TG (2011) The imprint of methane seepage on the geochemical record and early diagenetic processes in cold-water coral mounds on Pen Duick Escarpment, Gulf of Cadiz. Marine Geology, 282(1-2). 118-137. doi:10.1016/j.margeo.2010.08.005

Wei, B, Mollenhauer, G, Hefter, J, Grotheer, H and Jia, G (2020) Dispersal and aging of terrigenous organic matter in the Pearl River Estuary and the northern South China Sea Shelf. Geochimica et Cosmochimica Acta, 282. 324-339. doi:10.1016/j.gca.2020.04.032

280

Bloemsma, MR, Zabel, M, Stuut, JB, Tjallingii, R, Collins, JA and Weltje, GJ (2012) Modelling the joint variability of grain size and chemical composition in sediments. Sedimentary Geology, 280. 135-148. doi:10.1016/j.sedgeo.2012.04.009

de Boever, E, Birgel, D, Thiel, V, Muchez, P, Peckmann, JL, Dimitrov, L and Swennen, R (2009) The formation of giant tubular concretions triggered by anaerobic oxidation of methane as revealed by archaeal molecular fossils (Lower Eocene, Varna, Bulgaria). Palaeogeography, Palaeoclimatology, Palaeoecology, 280(1-2). 23-36. doi:10.1016/j.palaeo.2009.05.010

28

CAZypedia Consortium (2017) Ten years of CAZypedia: a living encyclopedia of carbohydrate-active enzymes. Glycobiology, 28(1). 3-8. doi:10.1093/glycob/cwx089

Zhu, C, Meador, TB, Dummann, W and Hinrichs, KU (2013) Identification of unusual butanetriol dialkyl glycerol tetraether and pentanetriol dialkyl glycerol tetraether lipids in marine sediments. Rapid Communications in Mass Spectrometry, 28(4). 332-338. doi:10.1002/rcm.6792

Zhu, C, Yoshinaga, MY, Peters, CA, Liu, XL, Elvert, M and Hinrichs, KU (2014) Identification and significance of unsaturated archaeal tetraether lipids in marine sediments. Rapid Communications in Mass Spectrometry, 28(10). 1144-1152. doi:10.1002/rcm.6887

278

Versteegh, GJM, Zonneveld, KAF and de Lange, GJ (2010) Selective aerobic and anaerobic degradation of lipids and palynomorphs in the Eastern Mediterranean since the onset of sapropel S1 deposition. Marine Geology, 278(1-4). 177-192. doi:10.1016/j.margeo.2010.10.007 PANGAEA Supplementary Data

277

Himmler, T, Bach, W, Bohrmann, G and Peckmann, JL (2010) Rare earth elements in authigenic methane-seep carbonates as tracers for fluid composition during early diagenesis. Chemical Geology, 277(1-2). 126-136. doi:10.1016/j.chemgeo.2010.07.015 PANGAEA Supplementary Data

Holmkvist, L, Arning, ET, Küster-Heins, K, Vandieken, V, Peckmann, JL, Zabel, M and Jørgensen, BB (2010) Phosphate geochemistry, mineralization processes, and Thioploca distribution in shelf sediments off central Chile. Marine Geology, 277(1-4). 61-72. doi:10.1016/j.margeo.2010.08.011

276

Gan, S, Schmidt, F, Heuer, VB, Goldhammer, T, Witt, M and Hinrichs, KU (2020) Impacts of redox conditions on dissolved organic matter (DOM) quality in marine sediments off the River Rhône, Western Mediterranean Sea. Geochimica et Cosmochimica Acta, 276. 151-169. doi:10.1016/j.gca.2020.02.001

275

Buerk, D, Klaucke, I, Sahling, H and Weinrebe, WR (2010) Morpho-acoustic variability of cold seeeps on the continental slope offshore Nicaragua: Result of fluid flow interaction with sedimentary processes. Marine Geology, 275(1-4). 53-65. doi:10.1016/j.margeo.2010.04.007

274

Jöns, N, Bach, W and Klein, F (2010) Magmatic influence on reaction paths and element transport during serpentinization. Chemical Geology, 274(3-4). 196-211. doi:10.1016/j.chemgeo.2010.04.009 PANGAEA Supplementary Data

Klapp, SA, Hemes, H, Klein, H, Bohrmann, G, MacDonald, IR and Kuhs, WF (2010) Grain size measurements of natural gas hydrates. Marine Geology, 274(1-4). 85-94. doi:10.1016/j.margeo.2010.03.007 PANGAEA Supplementary Data

Küster-Heins, K, Steinmetz, E, de Lange, GJ and Zabel, M (2010) Phosphorus cycling in marine sediments from the continental margin off Namibia. Marine Geology, 274(1-4). 95-106. doi:10.1016/j.margeo.2010.03.008 PANGAEA Supplementary Data

Riedinger, N, Brunner, B, Lin, YS, Vossmeyer, A, Ferdelman, TG and Jørgensen, BB (2010) Methane at the sediment-water transition in Black Sea sediments. Chemical Geology, 274(1-2). 29-37. doi:10.1016/j.chemgeo.2010.03.010 PANGAEA Supplementary Data

273

Zhang, Z, Cao, Z, Grasse, P, Dai, M, Gao, L, Kuhnert, H, Gledhill, M, Chiessi, CM, Doering, K and Frank, M (2020) Dissolved silicon isotope dynamics in large river estuaries. Geochimica et Cosmochimica Acta, 273. 367-382. doi:10.1016/j.gca.2020.01.028

272

Douville, E, Sallé, E, Frank, N, Eisele, MH, Pons-Branchu, E and Ayrault, S (2010) Rapid and accurate U-Th dating of ancient carbonates using inductively coupled plasma-quadrupole mass spectrometry. Chemical Geology, 272(1-4). 1-11. doi:10.1016/j.chemgeo.2010.01.007

Meckler, AN, Schubert, CJ, Hochuli, PA, Plessen, B, Birgel, D, Flower, BP, Hinrichs, KU and Haug, GH (2008) Glacial to Holocene terrigenous organic matter input to sediments from Orca Basin, Gulf of Mexico - a combined optical and biomarker approach. Earth and Planetary Science Letters, 272(1-2). 251-263. doi:10.1016/j.epsl.2008.04.046

271

Ehrenhauss, S, Witte, U, Bühring, S and Huettel, M (2004) Effect of advective pore water transport on distribution and degradation of diatoms in permeable North Sea sediments. Marine Ecology Progress Series, 271. 99-111. doi:10.3354/meps271099

Marbler, H, Koschinsky, A, Pape, T, Seifert, R, Weber, S, Baker, ET, de Carvalho, LM and Schmidt, K (2010) Geochemical and physical structure of the hydrothermal plume at the ultramafic hosted Logatchev hydrothermal field at 14°45' on the Mid Atlantic Ridge. Marine Geology, 271(3-4). 187-197. doi:10.1016/j.margeo.2010.01.012

27

Abegg, F, Bohrmann, G, Freitag, J and Kuhs, WF (2007) Fabric of gas hydrate in sediments from Hydrate Ridge - results from ODP Leg 204 samples. Geo-Marine Letters, 27. 269-277. doi:10.1007/s00367-007-0080-4 PANGAEA Supplementary Data

Brüning, M, Sahling, H, MacDonald, IR, Ding, F and Bohrmann, G (2010) Origin, distribution, and alteration of asphalts at the Chapopote Knoll, Southern Gulf of Mexico. Marine and Petroleum Geology, 27(5). 1093-1106. doi:10.1016/j.marpetgeo.2009.09.005 PANGAEA Supplementary Data

Ding, F, Spieß, V, MacDonald, IR, Brüning, M, Fekete, N and Bohrmann, G (2010) Shallow sediment deformation styles in north-western Campeche Knolls, Gulf of Mexico and their controls on the occurrence of hydrocarbon seepage. Marine and Petroleum Geology, 27. 959-972. doi:10.1016/j.marpetgeo.2010.01.014

Feng, D, Chen, D, Peckmann, JL and Bohrmann, G (2010) Authigenic carbonates from methane seeps of the northern Congo fan: Microbial formation mechanism. Marine and Petroleum Geology, 27. 748-756. doi:10.1016/j.marpetgeo.2009.08.006 PANGAEA Supplementary Data

Gaye, B, Fahl, K, Kodina, LA, Lahajnar, N, Nagel, B, Unger, D and Gebhardt, AC (2007) Particulate matter fluxes in the southern and central Kara Sea compared to sediments: Bulk fluxes, amino acids, stable carbon and nitrogen isotopes, sterols and fatty acids. Continental Shelf Research, 27(20). 2570-2594. doi:10.1016/j.csr.2007.07.003

Hauck, J, Völker, C, Wang, T, Hoppema, M, Losch, M and Wolf-Gladrow, D (2013) Seasonally different carbon flux changes in the Southern Ocean in response to the southern annular mode. Global Biogeochemical Cycles, 27(4). 1236-1245. doi:10.1002/2013GB004600

Heller, S, Müller, J, Kayser, M and Jensen, S (2021) Status of plant-available potassium after 17 years of wet grassland restoration on a degraded minerotrophic peat soil. Mires and Peat, 27. doi:10.19189/MaP.2021.APG.StA.2158

Klapp, SA, Bohrmann, G, Kuhs, WF, Murshed, MM, Pape, T, Klein, H, Techmer, KS, Heeschen, KU and Abegg, F (2010) Microstructures of structure I and II gas hydrates from the Gulf of Mexico. Marine and Petroleum Geology, 27(1). 116-125. doi:10.1016/j.marpetgeo.2009.03.004 PANGAEA Supplementary Data

Lever, MA, Heuer, VB, Morono, Y, Masui, N, Schmidt, F, Alperin, MJ, Inagaki, F, Hinrichs, KU and Teske, AP (2010) Acetogenesis in deep subseafloor sediemnts of the Juan de Fuca Ridge flank: A synthesis of geochemical, thermodynamic, and gene-based evidence. Geomicrobiology Journal, 27(2). 183-211. doi:10.1080/01490450903456681

Lin, YS, Biddle, JF, Lipp, JS, Orcutt, B, Holler, T, Teske, AP and Hinrichs, KU (2010) Effect of storage conditions on archaeal and bacterial communities in subsurface marine sediments. Geomicrobiology Journal, 27. 261-272. doi:10.1080/01490450903410423 PANGAEA Supplementary Data

Santelli, CM, Banerjee, NR, Bach, W and Edwards, KJ (2010) Tapping the subsurface ocean crust biosphere: Low biomass and drilling-related contamination calls for improved quality controls. Geomicrobiology Journal, 27(2). 158-169. doi:10.1080/01490450903456780

269

Pape, T, Bahr, A, Rethemeyer, J, Kessler, JD, Sahling, H, Hinrichs, KU, Klapp, SA, Reeburgh, WS and Bohrmann, G (2010) Molecular and isotopic partitioning of low-molecular-weight hydrocarbons during migration and gas hydrate precipitation in deposits of a high-flux seepage site. Chemical Geology, 269(3-4). 350-363. doi:10.1016/j.chemgeo.2009.10.009 PANGAEA Supplementary Data

268

Eickmann, B, Bach, W, Rosner, M and Peckmann, JL (2009) Geochemical constraints on the modes of carbonate precipitation in peridotites from the Logatchev Hydrothermal Vent Field and Gakkel Ridge. Chemical Geology, 268(1-2). 97-106. doi:10.1016/j.chemgeo.2009.08.002 PANGAEA Supplementary Data

Haas, A, Peckmann, JL, Elvert, M, Sahling, H and Bohrmann, G (2010) Patterns of carbonate authigenesis at the Kouilou pockmarks on the Congo deep-sea fan. Marine Geology, 268(1-4). 129-136. doi:10.1016/j.margeo.2009.10.027 PANGAEA Supplementary Data

266

Naehr, TH, Birgel, D, Bohrmann, G, MacDonald, IR and Kasten, S (2009) Biogeochemical controls on authigenic carbonate formation at the Chapopote "asphalt volcano", Bay of Campeche. Chemical Geology, 266(3-4). 399-411. doi:10.1016/j.chemgeo.2009.07.002 PANGAEA Supplementary Data

265

Evans, TW, Coffinet, S, Könneke, M, Lipp, JS, Becker, KW, Elvert, M, Heuer, V and Hinrichs, KU (2019) Assessing the carbon assimilation and production of benthic archaeal lipid biomarkers using lipid-RIP. Geochimica et Cosmochimica Acta, 265. 431-442. doi:10.1016/j.gca.2019.08.030

262

Arning, ET, Lückge, A, Breuer, C, Gussone, N, Birgel, D and Peckmann, JL (2009) Genesis of phosphorite crusts off Peru. Marine Geology, 262(1-4). 68-81. doi:10.1016/j.margeo.2009.03.006 PANGAEA Supplementary Data

261

Diepenbroek, M, Schindler, U, Huber, R, Pesant, S, Stocker, M, Felden, J, Buss, M and Weinrebe, M (2017) Terminology supported archiving and publication of environmental science data in PANGAEA. Journal of Biotechnology, 261. 177-186. doi:10.1016/j.jbiotec.2017.07.016

Omoregie, EO, Niemann, H, Mastalerz, V, de Lange, GJ, Stadnitskaia, A, Mascle, J, Foucher, JP and Boetius, A (2009) Microbial methane oxidation and sulfate reduction at cold seeps of the deep Eastern Mediterranean Sea. Marine Geology, 261(1-4). 114-127. doi:10.1016/j.margeo.2009.02.001

260

Gussone, N, Langer, G, Geisen, M, Steel, BA and Riebesell, U (2007) Calcium isotope fractionation in coccoliths of cultured Calcidiscus leptoporus, Helicosphaera carteri, Syracosphaera pulchra and Umbilicosphaera foliosa. Earth and Planetary Science Letters, 260(3-4). 505-515. doi:10.1016/j.epsl.2007.06.001

26

Breusing, C, Biastoch, A, Drews, A, Metaxas, A, Jollivet, D, Vrijenhoek, RC, Bayer, T, Melzner, F, Sayavedra, L, Petersen, JM, Dubilier, N, Schilhabel, MB, Rosenstiel, P and Reusch, TBH (2016) Biophysical and population genetic models predict the presence of “phantom” stepping stones connecting Mid-Atlantic Ridge vent ecosystems. Current Biology, 26(17). 2257-2267. doi:10.1016/j.cub.2016.06.062 PANGAEA Supplementary Data

Cook, MS, Keigwin, LD, Birgel, D and Hinrichs, KU (2011) Repeated pulses of vertical methane flux recorded in glacial sediments from the southeast Bering Sea. Paleoceanography, 26. PA2210. doi:10.1029/2010PA001993 PANGAEA Supplementary Data

Feseker, T, Pape, T, Wallmann, K, Klapp, SA, Schmidt-Schierhorn, F and Bohrmann, G (2009) The thermal structure of the Dvurechenskii mud volcano and its implications for gas hydrate stability and eruption dynamics. Marine and Petroleum Geology, 26(9). 1812-1823. doi:10.1016/j.marpetgeo.2009.01.021 PANGAEA Supplementary Data

Hansell, DA, Carlson, CA and Schlitzer, R (2012) Net removal of major marine dissolved organic carbon fractions in the subsurface ocean. Global Biogeochemical Cycles, 26. doi:10.1029/2011GB004069

Hettle, AG, Vickers, C, Robb, CS, Liu, F, Withers, SG, Hehemann, JH and Boraston, AB (2018) The molecular basis of polysaccharide sulfatase activity and a nomenclature for catalytic subsites in this class of enzyme. Structure, 26(5). 747-758.e4. doi:10.1016/j.str.2018.03.012

Liu, XL, Summons, RE and Hinrichs, KU (2012) Extending the known range of glycerol ether lipids in the environment: structural assignments based on tandem mass spectral fragmentation patterns. Rapid Communications in Mass Spectrometry, 26(19). 2295-2302. doi:10.1002/rcm.6355

Purser, A, Marcon, Y, Hoving, HJT, Vecchione, M, Piatkowski, U, Eason, D, Bluhm, H and Boetius, A (2016) Association of deep-sea incirrate octopods with manganese crusts and nodule fields in the Pacific Ocean. Current Biology, 26(24). R1268-R1269. doi:10.1016/j.cub.2016.10.052 PANGAEA Supplementary Data

Robb, CS, Mystkowska, AA and Hehemann, JH (2017) Crystal structure of a marine glycoside hydrolase family 99-related protein lacking catalytic machinery. Protein Science, 26(12). 2445-2450. doi:10.1002/pro.3291

Sahling, H, Bohrmann, G, Artemov, YG, Bahr, A, Brüning, M, Klapp, SA, Klaucke, I, Kozlova, E, Nikolovska, A, Pape, T, Reitz, A and Wallmann, K (2009) Vodyanitskii mud volcano, Sorokin Trough, Black Sea: Geological characterization and quantification of gas bubble streams. Marine and Petroleum Geology, 26(9). 1799-1811. doi:10.1016/j.marpetgeo.2009.01.010 PANGAEA Supplementary Data

257

Himmler, T, Freiwald, A, Stollhofen, H and Peckmann, JL (2008) Late Carboniferous hydrocarbon-seep carbonates from the glaciomarine Dwyka Group, southern Namibia. Palaeogeography, Palaeoclimatology, Palaeoecology, 257(1-2). 185-197. doi:10.1016/j.palaeo.2007.09.018

255

März, C, Hoffmann, J, Bleil, U, de Lange, GJ and Kasten, S (2008) Diagenetic changes of magnetic and geochemical signals by anaerobic methane oxidation in sediments of the Zambesi deep-sea fan (SW Indian Ocean). Marine Geology, 255(3-4). 118-130. doi:10.1016/j.margeo.2008.05.013 PANGAEA Supplementary Data

Seewald, JS, Reeves, EP, Bach, W, Saccocia, PJ, Craddock, PR, Walsh, E, Shanks, WC, Sylva, SP, Pichler, T and Rosner, M (2019) Geochemistry of hot-springs at the SuSu Knolls hydrothermal field, Eastern Manus Basin: Advanced argillic alteration and vent fluid acidity. Geochimica et Cosmochimica Acta, 255. 25-48. doi:10.1016/j.gca.2019.03.034

254

Drillet, G, Iversen, MH, Sørensen, TF, Ramløv, H, Lund, T and Hansen, BW (2006) Effect of cold storage upon eggs of the calaniod copepod Acartia tonsa (Dana) and their offspring. Aquaculture, 254. 714-729. doi:10.1016/j.aquaculture.2005.11.018

253

Craddock, PR, Rouxel, OJ, Ball, LA and Bach, W (2008) Sulfur Isotope Measurement of Sulfate and Sulfide by High-Resolution MC-ICP-MS. Chemical Geology, 253(3-4). 102-113. doi:10.1016/j.chemgeo.2008.04.017

252

Rouxel, OJ, Shanks, WC, Bach, W and Edwards, KJ (2008) Integrated Fe and S isotope studay of seafloor hydrothermal vents at East Pacific Rise 9-10°N. Chemical Geology, 252(3-4). 214-227. doi:10.1016/j.chemgeo.2008.03.009

25

Arning, ET, Birgel, D, Schulz-Vogt, HN, Holmkvist, L, Jørgensen, BB, Larson, A and Peckmann, JL (2008) Lipid Biomarker Patterns of Phosphogenic Sediments from Upwelling Regions. Geomicrobiology Journal, 25(2). 69-82. doi:10.1080/01490450801934854 PANGAEA Supplementary Data

Mazzini, A, Ivanov, MK, Nermoen, A, Bahr, A, Bohrmann, G, Svensen, H and Planke, S (2008) Complex plumbing systems in the near subsurface: geometries of authigenic carbonates from Dolgovskoy Mound (Black Sea) constrained by analogue experiments. Marine and Petroleum Geology, 25. 457-472. doi:10.1016/j.marpetgeo.2007.10.002 PANGAEA Supplementary Data

Oni, OE and Friedrich, MW (2017) Metal oxide reduction linked to anaerobic methane oxidation. Trends in Microbiology, 25(2). 88-90. doi:10.1016/j.tim.2016.12.001

Wien, K, Kölling, M and Schulz, HD (2005) Close correlation between Sr/Ca ratios in bulk sediments from the Southern Cape Basin and the SPECMAP record. Geo-Marine Letters, 25(4). 265-271. doi:10.1007/s00367-005-0211-8 PANGAEA Supplementary Data

Wien, K, Wissmann, D, Kölling, M and Schulz, HD (2005) Fast application of X-ray fluorescence spectrometry aboard ship: how good is the portable new Spectro Xepos analyser? Geo-Marine Letters, 25(4). 248-264. doi:10.1007/s00367-004-0206-x PANGAEA Supplementary Data

Wolf, C, Iversen, MH, Klaas, C and Metfies, K (2016) Limited sinking of Phaeocystis during a 12 days sediment trap study. Molecular Ecology, 25(14). 3428-3435. doi:10.1111/mec.13697

Yoshinaga, MY, Kellermann, MY, Rossel, PE, Schubotz, F, Lipp, JS and Hinrichs, KU (2011) Systematic fragmentation patterns of archaeal intact polar lipids by high-performance liquid chromatography/electrospray ionization ion-trap mass spectrometry. Rapid Communications in Mass Spectrometry, 25. 3563-3574. doi:10.1002/rcm.5251

249

Han, X, Suess, E, Huang, YJ, Wu, N, Bohrmann, G, Su, X, Eisenhauer, A, Rehder, G and Fang, Y (2008) Jiulong Methane Reef: Microbial mediation seep-carbonates in the South China Sea. Marine Geology, 249(3-4). 243-256. doi:10.1016/j.margeo.2007.11.012 PANGAEA Supplementary Data

Imhoff, JF, Sahling, H, Süling, J and Kath, T (2003) 16 S rDANA based phylogeny of sulfur-oxidising bacterial endosymbionts in marine bivalves from cold-seep habitats. Marine Ecology Progress Series, 249. 39-51. doi:10.3354/meps249039

Sahling, H, Bohrmann, G, Spieß, V, Bialas, J, Breitzke, M, Ivanov, M, Kasten, S, Krastel, S and Schneider, RR (2008) Pockmarks in the northern Congo Fan area, SW Africa: Complex seafloor features shaped by fluid flow. Marine Geology, 249(3-4). 206-225. doi:10.1016/j.margeo.2007.11.010

248

Wallmann, K, Drews, M, Aloisi, G and Bohrmann, G (2006) Methane discharge into the Black Sea and the global ocean via fluid flow through submarine mud volcanoes. Earth and Planetary Science Letters, 248. 544-599. doi:10.1016/j.epsl.2006.06.026 PANGAEA Supplementary Data

247

Arvidson, RS, Fischer, C, Kurganskaya, I and Lüttge, A (2014) Treatment of stochastic mineral surface reactions. Abstracts of Papers of the American Chemical Society, 247.

Gray, DD, Zonneveld, KAF and Versteegh, GJM (2017) Species-specific sensitivity of dinoflagellate cysts to aerobic degradation: A five-year natural exposure experiment. Review of Palaeobotany and Palynology, 247. 175-187. doi:10.1016/j.revpalbo.2017.09.002

Kurganskaya, I, Fischer, C and Lüttge, A (2014) Modeling silicate dissolution at micro-scale using kinetic Monte Carlo approach. A case study with quartz. Abstracts of Papers of the American Chemical Society, 247.

245

Illing, CJ, Hallmann, C, Scott, AC, Collinson, ME, Briggs, DEG, Strauss, H and Summons, RE (2019) Heterogeneity of free and occluded bitumen in a natural maturity sequence from Oligocene Lake Enspel. Geochimica et Cosmochimica Acta, 245. 240-265. doi:10.1016/j.gca.2018.10.021

244

Bohrmann, G, Kuhs, WF, Klapp, SA, Techmer, KS, Klein, H, Murshed, MM and Abegg, F (2007) Appearance and preservation of natural gas hydrate from Hydrate Ridge sampled during ODP Leg 204 drilling. Marine Geology, 244(1-4). 1-14. doi:10.1016/j.margeo.2007.05.003 PANGAEA Supplementary Data

Hühnerbach, V, Masson, DG, Bohrmann, G, Bull, JM and Weinrebe, WR (2005) Deformation and submarine landsliding caused by seamount subduction beneath the Costa Rican continental margin - new insights from high-resolution sidescan sonar data. Geological Society of London, Special Publications, 244. 195-205. doi:10.1144/GSL.SP.2005.244.01.12

243

Magalhães, VH, Pinheiro, LM, Ivanov, MK, Kozlova, E, Blinova, VN, Kolganova, J, Vasconcelos, C, McKenzie, JA, Bernasconi, SM, Kopf, AJ, Diaz del Rio, V, Gonzales, FJ and Somoza, L (2012) Formation processes of methane-derived authigenic carbonates from the Gulf of Cadiz. Sedimentary Geology, 243. 155-168. doi:10.1016/j.sedgeo.2011.10.013

242

Evans, TW, Könneke, M, Lipp, JS, Adhikari, RR, Taubner, H, Elvert, M and Hinrichs, KU (2018) Lipid biosynthesis of Nitrosopumilus maritimus dissected by lipid specific radioisotope probing (lipid-RIP) under contrasting ammonium supply. Geochimica et Cosmochimica Acta, 242. 51-63. doi:10.1016/j.gca.2018.09.001 PANGAEA Supplementary Data

241

Riedinger, N, Kasten, S, Gröger, J, Franke, C and Pfeifer, K (2006) Active and buried authigenic barite fronts in sediments from the eastern Cape Basin. Earth and Planetary Science Letters, 241(3-4). 876-888. doi:10.1016/j.epsl.2005.10.032 PANGAEA Supplementary Data

24

D'Andrilli, J, Dittmar, T, Koch, BP, Purcell, JM, Marshall, AG and Cooper, WT (2010) Comprehensive characterization of marine dissolved organic matter by Fourier transform ion cyclotron resonance mass spectrometry with electrospray and atmospheric pressure photoionization. Rapid Communications in Mass Spectrometry, 24(5). 643-650. doi:10.1002/rcm.4421

Dhamelincourt, MC, Vecoli, M, Mezzetti, A, Cesari, C, Versteegh, GJM and Riboulleau, A (2010) Laser Raman micro-spectroscopy of Proterozoic and Palaeozoic organic-walled microfossils (acritarchs and prasinophytes) from the Ghadamis Basin, Libya and Volta Basin, Ghana. Spectroscopy, 24(3-4). 207-212. doi:10.3233/SPE-2010-0451

Lin, YS, Lipp, JS, Yoshinaga, MY, Lin, SH, Elvert, M and Hinrichs, KU (2010) Intramolecular stable carbon isotopic analysis of archaeal glycosyl tetraether lipids. Rapid Communications in Mass Spectrometry, 24(19). 2817-2826. doi:10.1002/rcm.4707 PANGAEA Supplementary Data

239

Teichert, BMA, Torres, ME, Bohrmann, G and Eisenhauer, A (2005) Fluid sources, fluid pathways and diagenetic reactions across an accretionary prism revealed by Sr and B geochemistry. Earth and Planetary Science Letters, 239(1-2). 106-121. doi:10.1016/j.epsl.2005.08.002 PANGAEA Supplementary Data

Torres, ME, Wallmann, K, Tréhu, AM, Bohrmann, G, Borowski, WS and Tomaru, H (2005) Reply to comment on "gas hydrate growth, methane transport and chloride enrichment at southern summit of Hydrate Ridge, Cascadia Margin off Oregon". Earth and Planetary Science Letters, 239(1-2). 168-175. doi:10.1016/j.epsl.2005.08.012

237

Costa, BFO, Blumers, M, Shylin, SI, Ksenofontov, V, Oni, O, Kasten, S, Fischer, D, Wagenknecht, L, Kulkarni, A, Friedrich, MW and Klingelhöfer, G (2016) Mössbauer spectroscopy and X-ray fluorescence studies on sediments from the methanic zone of the Helgoland mud area, North Sea. Hyperfine Interactions, 237(1). doi:10.1007/s10751-016-1297-2

Gruen, DS, Wang, DT, Könneke, M, Topçuoğlu, BD, Stewart, LC, Goldhammer, T, Holden, JF, Hinrichs, KU and Ono, S (2018) Experimental investigation on the controls of clumped isotopologue and hydrogen isotope ratios in microbial methane. Geochimica et Cosmochimica Acta, 237. 339-356. doi:10.1016/j.gca.2018.06.029

Henkel, S, Kasten, S, Hartmann, JF, Silva-Busso, A and Staubwasser, M (2018) Iron cycling and stable Fe isotope fractionation in Antarctic shelf sediments, King George Island. Geochimica et Cosmochimica Acta, 237. 320-338. doi:10.1016/j.gca.2018.06.042 PANGAEA Supplementary Data

236

Hensen, C and Wallmann, K (2005) Methane formation at Costa Rica continental margin - constraints for gas hydrate inventories and cross-décollement fluid flow. Earth and Planetary Science Letters, 236(1-2). 41-60. doi:10.1016/j.epsl.2005.06.007

234

Paulick, H, Bach, W, Godard, M, de Hoog, JCM, Suhr, G and Harvey, J (2006) Geochemistry of abyssal peridotites (Mid-Atlantic Ridge, 15°20'N, ODP Leg 209): implications for fluid-rock interaction in slow spreading environments. Chemical Geology, 234(3-4). 179-210. doi:10.1016/j.chemgeo.2006.04.011 PANGAEA Supplementary Data

232

Niazi, NK, Bibi, I, Shahid, M, Ok, YS, Burton, ED, Wang, H, Shaheen, SM, Rinklebe, J and Lüttge, A (2018) Arsenic removal by perilla leaf biochar in aqueous solutions and groundwater: An integrated spectroscopic and microscopic examination. Environmental Pollution, 232. 31-41. doi:10.1016/j.envpol.2017.09.051

231

Klaucke, I, Sahling, H, Weinrebe, WR, Blinova, VN, Bürk, D, Lursmanashvili, N and Bohrmann, G (2006) Acoustic investigation of cold seeps offshore Georgia, eastern Black Sea. Marine Geology, 231(1-4). 51-67. doi:10.1016/j.margeo.2006.05.011

Sahling, H, Linke, P, Suess, E and Lee, RW (2002) Macrofaunal community structure and sulfide flux at gas hydrate deposits from Cascadia convergent margin (NE Pacific). Marine Ecology Progress Series, 231. 121-138. doi:10.3354/meps231121

23

Birgel, D, Peckmann, JL, Klautzsch, S, Thiel, V and Reitner, J (2006) Anaerobic and aerobic oxidation of methane at Late Cretaceous seeps in the Western Interior Seaway, USA. Geomicrobiology Journal, 23. 565-577. doi:10.1080/01490450600897369

Blinova, VN, Ivanov, M and Bohrmann, G (2003) Hydrocarbon gases in deposits from mud volcanoes in the Sorokin Trough, northeatsern Black Sea. Geo-Marine Letters, 23(3-4). 250-257. doi:10.1007/s00367-003-0148-8 PANGAEA Supplementary Data

Bohrmann, G, Ivanov, M, Foucher, JP, Spieß, V, Bialas, J, Weinrebe, WR, Abegg, F, Aloisi, G, Artemov, YG, Blinova, VN, Drews, M, Greinert, J, Heidersdorf, F, Krastel, S, Krabbenhöft, A, Polikarpov, IG, Saburova, M, Schmale, O, Seifert, R, Volkonskaya, A and Zillmer, M (2003) Mud volcanoes and gas hydrates in the Black Sea - new data from Dvurechenskii and Odessa mud volcanoes. Geo-Marine Letters, 23(3-4). 239-249. doi:10.1007/s00367-003-0157-7

Himmler, T, Brinkmann, F, Bohrmann, G and Peckmann, JL (2011) Corrosion patterns of seep-carbonates from the eastern Mediterranean Sea. Terra Nova, 23(3). 206-212. doi:10.1111/j.1365-3121.2011.01000.x

Kiel, S and Peckmann, JL (2008) Paleoecology and evolutionary significance of an Early Cretaceous Peregrinella-dominated hydrocarbon-seep deposit on the Crimean Peninsula. Palaios, 23. 751-759. doi:10.2110/palo.2008.p08-052r

Krastel, S, Spieß, V, Ivanov, M, Weinrebe, WR, Bohrmann, G, Shashkin, P and Heidersdorf, F (2003) Acoustic investigations of mud volcanoes in the Sorokin Trough, Black Sea. Geo-Marine Letters, 23(3-4). 230-238. doi:10.1007/s00367-003-0143-0

Lohmann, R, Burgess, RM, Cantwell, MG, Ryba, SA, MacFarlane, JK and Gschwend, PM (2004) Dependency of polychlorinated biphenyl and polycyclic aromatic hydrocarbon bioaccumulation in mya arenaria on both water column and sediment bed chemical activities. Environmental Toxicology and Chemistry, 23(11). 2551-2562. doi:10.1897/03-400

Russell, JA, Dubilier, N and Rudgers, JA (2014) Nature's microbiome: introduction. Molecular Ecology, 23(6). 1225-1237. doi:10.1111/mec.12676

Scheurle, C and Hebbeln, D (2003) Stable oxygen isotopes as recorders of salinity and river discharge in the German Bight, North Sea. Geo-Marine Letters, 23(2). 130-136. doi:10.1007/s00367-003-0133-2

Zinger, L, Boetius, A and Ramette, A (2014) Bacterial taxa-area and distance-decay relationships in marine environments. Molecular Ecology, 23(4). 954-964. doi:10.1111/mec.12640

227

Kahl, WA, Jöns, N, Bach, W, Klein, F and Alt, JC (2015) Ultramafic clasts from the South Chamorro serpentine mud volcano reveal a polyphase serpentinization history of the Mariana forearc mantle. Lithos, 227. 1-20. doi:10.1016/j.lithos.2015.03.015

Peckmann, JL, Little, CTS, Gill, F, Walliser, OH and Reitner, J (2005) Worm tube fossils from the Hollard Mound hydrocarbon-seep deposit, Middle Devonian: Palaeozoic seep-related vestimentiferans? In: Peckmann J, Goedert JL (eds.) Geobiology of Ancient and Modern Methane-Seeps. Palaeogeography, Palaeoclimatology, Palaeoecology, 227(1-3). 242-257. doi:10.1016/j.palaeo.2005.04.021

Reitner, J, Peckmann, JL, Blumenberg, M, Michaelis, W, Reimer, AL and Thiel, V (2005) Concretionary methane-seep carbonates and associated microbial communities in Black Sea sediments. In: Peckmann, JL and Goedert, JL (eds.) Geobiology of Ancient and Modern Methane-Seeps. Elsevier, 18-30. doi:10.1016/j.palaeo.2005.04.033

Teichert, BMA, Bohrmann, G and Suess, E (2005) Chemoherms on Hydrate Ridge - Unique microbially mediated carbonate build-ups growing into the water column. Palaeogeography, Palaeoclimatology, Palaeoecology, 227(1-3). 67-85. doi:10.1016/j.palaeo.2005.04.029 PANGAEA Supplementary Data

226

Torres, ME, Wallmann, K, Tréhu, AM, Bohrmann, G, Borowski, WS and Tomaru, H (2004) Gas hydrate growth, methane transport, and chloride enrichment at the southern summit of Hydrate Ridge, Cascadia Margin off Oregon. Earth and Planetary Science Letters, 226(1-2). 225-241. doi:10.1016/j.epsl.2004.07.029

225

Aloisi, G, Drews, M, Wallmann, K and Bohrmann, G (2004) Fluid expulsion from Dvurechenskii Mud Volcano (Black Sea) Part I: fluid sources and relevance to Li, B, Sr and dissolved inorganic nitrogen cycles. Earth and Planetary Science Letters, 225. 347-363. doi:10.1016/j.epsl.2004.07.006

Mau, S, Sahling, H, Rehder, G, Suess, E, Linke, P and Söding, E (2006) Estimates of methane output from mud extrusions at the erosive convergent margin off Costa Rica. Marine Geology, 225(1-4). 129-144. doi:10.1016/j.margeo.2005.09.007

224

Zhuang, GC, Heuer, VB, Lazar, CS, Goldhammer, T, Wendt, J, Samarkin, VA, Elvert, M, Teske, AP, Joye, SB and Hinrichs, KU (2018) Relative importance of methylotrophic methanogenesis in sediments of the Western Mediterranean Sea. Geochimica et Cosmochimica Acta, 224. 171-186. doi:10.1016/j.gca.2017.12.024 PANGAEA Supplementary Data

223

Vanko, DA and Bach, W (2005) Heating and freezing experiments on aqueous fluid inclusions in anhydrite: Recognition and effects of stretching and the low-temperature formation of gypsum. Chemical Geology, 223(1-3). 35-45. doi:10.1016/j.chemgeo.2004.11.021

222

Tréhu, AM, Long, PE, Torres, ME, Bohrmann, G, Rack, FR, Collett, TS, Goldberg, DS, Milkov, AV, Riedel, M, Schultheiss, P, Bangs, NL, Barr, SR, Borowski, WS, Claypool, GE, Delwiche, ME, Dickens, GR, Gràcia, E, Guerin, G, Holland, M, Johnson, JE, Lee, YJ, Liu, CS, Su, X, Teichert, BMA, Tomaru, H, Vanneste, M, Watanabe, M and Weinberger, JL (2004) Three-dimensional distribution of gas hydrate beneath southern Hydrate Ridge: constraints from ODP Leg 204. Earth and Planetary Science Letters, 222(3-4). 845-862. doi:10.1016/j.epsl.2004.03.035 PANGAEA Supplementary Data

Wawra, S, Fesel, P, Widmer, H, Neumann, U, Lahrmann, U, Becker, S, Hehemann, JH, Langen, G and Zuccaro, A (2019) FGB1 and WSC3 are in planta‐ induced β ‐glucan‐binding fungal lectins with different functions. New Phytologist, 222(3). 1493-1506. doi:10.1111/nph.15711

22

Boetius, A and Wenzhöfer, F (2009) In Situ Technologies for Studying Deep-Sea Hotspot Ecosystems. Oceanography, 22(1). 177. doi:10.5670/oceanog.2009.17

Cullen, JT, Hurwitz, S, Barnes, JD, Lassiter, JC, Penniston‐Dorland, S, Meixner, A, Wilckens, FK, Kasemann, SA and McCleskey, RB (2021) The systematics of chlorine, lithium, and boron and δ37Cl, δ7Li, and δ11B in the hydrothermal system of the Yellowstone Plateau Volcanic Field. Geochemistry, Geophysics, Geosystems, 22(4). doi:10.1029/2020GC009589

De La Rocha, CL, Nowald, N and Passow, U (2008) Interactions between diatom aggregates, minerals, POC, and DOM: further implications for the ballast hypothesis. Global Biogeochemical Cycles, 22. GB4005. doi:10.1029/2007GB003156

Friese, CA, van der Does, M, Merkel, U, Iversen, MH, Fischer, G and Stuut, JBW (2016) Environmental factors controlling the seasonal variability in particle size distribution of modern Saharan dust deposited off Cape Blanc. Aeolian Research, 22. 165-179. doi:10.1016/j.aeolia.2016.04.005 PANGAEA Supplementary Data

Hansell, DA, Carlson, CA, Repeta, DJ and Schlitzer, R (2009) Dissolved organic matter in the ocean. A controversy stimulates new insights. Oceanography, 22(4). 202-211. doi:10.5670/oceanog.2009.109

Köster, M, Kars, M, Schubotz, F, Tsang, MY, Maisch, M, Kappler, A, Morono, Y, Inagaki, F, Heuer, VB, Kasten, S and Henkel, S (2021) Evolution of (bio‐)geochemical processes and diagenetic alteration of sediments along the tectonic migration of ocean floor in the Shikoku Basin off Japan. Geochemistry, Geophysics, Geosystems, 22(8). doi:10.1029/2020GC009585

Peckmann, JL, Campbell, KA, Walliser, OH and Reitner, J (2007) A Late Devonian hydrocarbon-seep deposit dominated by dimerelloid brachiopods, Morocco. Palaios, 22. 114-122. doi:10.2110/palo.2005.p05-115r

Quemener, M, Mara, P, Schubotz, F, Beaudoin, D, Li, W, Pachiadaki, M, Sehein, TR, Sylvan, JB, Li, J, Barbier, G, Edgcomb, V and Burgaud, G (2020) Meta‐omics highlights the diversity, activity and adaptations of fungi in deep oceanic crust. Environmental Microbiology, 22(9). 3950-3967. doi:10.1111/1462-2920.15181

Schartel, B, Weiß, A, Sturm, H, Kleemeier, M, Hartwig, A, Vogt, C and Fischer, RX (2011) Layered silicate epoxy nanocomposites: formation of the inorganic-carbonaceous fire protection layer. Polymers for Advanced Technologies, 22(12). 1581-1592. doi:10.1002/pat.1644

Yu, J, Elderfield, H and Hönisch, B (2007) B/Ca in planktonic foraminifera as a proxy for surface seawater pH. Paleoceanography, 22. PA2202. doi:10.1029/2006PA001347 PANGAEA Supplementary Data

217

Hansen, CT, Meixner, A, Kasemann, SA and Bach, W (2017) New insight on Li and B isotope fractionation during serpentinization derived from batch reaction investigations. Geochimica et Cosmochimica Acta, 217. 51-79. doi:10.1016/j.gca.2017.08.014 PANGAEA Supplementary Data

Hansen, CT, Niggemann, J, Giebel, HA, Simon, M, Bach, W and Dittmar, T (2019) Biodegradability of hydrothermally altered deep-sea dissolved organic matter. Marine Chemistry, 217. 103706. doi:10.1016/j.marchem.2019.103706

216

Dachwald, B, Ulamec, S, Postberg, F, Sohl, F, de Vera, JP, Waldmann, C, Lorenz, RD, Zacny, KA, Hellard, H, Biele, J and Rettberg, P (2020) Key technologies and instrumentation for subsurface exploration of ocean worlds. Space Science Reviews, 216(5). doi:10.1007/s11214-020-00707-5

214

Heinze, C and Dittert, N (2005) Impact of paleocirculations on the silicon redistribution in the world ocean. Marine Geology, 214(1-3). 201-213. doi:10.1016/j.margeo.2004.10.026

213

Abouchami, W and Zabel, M (2004) Climate forcing of the Pb isotope record of terrigenous input into the Equatorial Atlantic. Earth and Planetary Science Letters, 213(3-4). 221-234. doi:10.1016/S0012-821X(03)00304-2

212

Briese, L, Arvidson, RS and Lüttge, A (2017) The effect of crystal size variation on the rate of dissolution – A kinetic Monte Carlo study. Geochimica et Cosmochimica Acta, 212. 167-175. doi:10.1016/j.gca.2017.06.010

211

Durán-Toro, VM, Price, RE, Maas, M, Brombach, CC, Pichler, T, Rezwan, K and Bühring, SI (2019) Amorphous arsenic sulfide nanoparticles in a shallow water hydrothermal system. Marine Chemistry, 211. 25-36. doi:10.1016/j.marchem.2019.03.008

21

Arvidson, RS, Fischer, C and Lüttge, A (2015) Calcite dissolution kinetics. Aquatic Geochemistry, 21(5). 415-422. doi:10.1007/s10498-015-9268-9

Bice, KL, Birgel, D, Meyers, PA, Dahl, KA, Hinrichs, KU and Norris, RD (2006) A multiple proxy and modeling study of Cretaceous upper ocean temperatures and atmospheric CO2 concentrations. Paleoceanography, 21. PA2002. doi:10.1029/2005PA001203 PANGAEA Supplementary Data

Cotrim da Cunha, L, Buithenhuis, ET, Le Quéré, C, Giraud, X and Ludwig, W (2007) Potential impact of changes in river nutrient supply on global ocean biogeochemistry. Global Biogeochemical Cycles, 21. GB4007. doi:10.1029/2006GB002718

Dutschei, T, Zühlke, MK, Welsch, N, Eisenack, T, Hilkmann, M, Krull, J, Stühle, C, Brott, S, Dürwald, A, Reisky, L, Hehemann, JH, Becher, D, Schweder, T and Bornscheuer, UT (2022) Metabolic engineering enables Bacillus licheniformis to grow on the marine polysaccharide ulvan. Microbial Cell Factories, 21(1). doi:10.1186/s12934-022-01931-0

Feng, D, Chen, D and Peckmann, JL (2009) Rare earth elements in seep carbonates as tracers of variable redox conditions at ancient hydrocarbon seeps. Terra Nova, 21(1). 49-56. doi:10.1111/j.1365-3121.2008.00855.x

Meier, DV, Pjevac, P, Bach, W, Markert, S, Schweder, T, Jamieson, J, Petersen, S, Amann, R and Meyerdierks, A (2019) Microbial metal-sulfide oxidation in inactive hydrothermal vent chimneys suggested by metagenomic and metaproteomic analyses. Environmental Microbiology, 21(2). 682-701. doi:10.1111/1462-2920.14514

Peckmann, JL, Thiel, V, Reitner, J, Taviani, M, Aharon, P and Michaelis, W (2004) A microbial mat of a large sulfur bacterium preserved in a Miocene methane-seep limestone. Geomicrobiology Journal, 21. 247-255. doi:10.1080/01490450490438757

Weiner, A, Aurahs, R, Kurasawa, A, Kitazato, H and Kucera, M (2012) Vertical niche partitioning between cryptic sibling species of a cosmopolitan marine planktonic protist. Molecular Ecology, 21. 4063-4073. doi:10.1111/j.1365-294X.2012.05686.x

209

Moll, M, Paulick, H, Suhr, G and Bach, W (2007) Data Report: Microprobe analyses of primary phases (olivine, pyroxene, and spinel) and alteration products (serpentine, iowaite, talc, magnetite, and sulfides) in Holes 1268A, 1272A, and 1274A. In: Kelemen, PB, Kikawa, E and Miller, DJ (eds.) Proceedings of the Ocean Drilling Program. Scientific Results, 209. College Station, TX (Ocean Drilling Program), 1-13. doi:10.2973/odp.proc.sr.209.003.2007 PANGAEA Supplementary Data

207

Egger, M, Hagens, M, Sapart, CJ, Dijkstra, N, van Helmond, NAGM, Mogollón, JM, Risgaard-Petersen, N, van der Veen, C, Kasten, S, Riedinger, N, Böttcher, ME, Röckmann, T, Jørgensen, BB and Slomp, CP (2017) Iron oxide reduction in methane-rich deep Baltic Sea sediments. Geochimica et Cosmochimica Acta, 207. 256-276. doi:10.1016/j.gca.2017.03.019

Fredricks, HF and Hinrichs, KU (2007) Data Report: Intact membrane lipis as indicators of subsurface life in Cretaceous and Paleogene sediments from Sites 1257 and 1258. In: Mosher, DC, Erbacher, J and Malone, MJ (eds.) Proceedings of the Ocean Drilling Program, Scientific Results. College Station, TX (Ocean Drilling Program), 1-11. doi:10.2973/odp.proc.sr.207.112.2007 PANGAEA Supplementary Data

Grevemeyer, I, Kopf, AJ, Fekete, N, Kaul, NE, Villinger, H, Heesemann, M, Wallmann, K, Spieß, V, Gennerich, HH, Müller, M and Weinrebe, WR (2004) Fluid flow through active mud dome Mound Culebra offshore Nicoya Peninsula, Costa Rica: evidence from heat flow surveying. Marine Geology, 207(1-4). 145-157. doi:10.1016/j.margeo.2004.04.002

Schmidt, F, Koch, BP, Goldhammer, T, Elvert, M, Witt, M, Lin, YS, Wendt, J, Zabel, M, Heuer, VB and Hinrichs, KU (2017) Unraveling signatures of biogeochemical processes and the depositional setting in the molecular composition of pore water DOM across different marine environments. Geochimica et Cosmochimica Acta, 207. 57-80. doi:10.1016/j.gca.2017.03.005

205

Orphan, VJ, Ussler, WIII, Nähr, TH, House, CH, Hinrichs, KU and Paull, CK (2004) Geological, geochemical, and microbiological heterogeneity of the seafloor around methane vents in the Eel River Basin, offshore California. Chemical Geology, 205(3-4). 265-289. doi:10.1016/j.chemgeo.2003.12.035

Peckmann, JL and Thiel, V (2004) Carbon cycling at ancient methane-seeps. Chemical Geology, 205(3-4). 443-467. doi:10.1016/j.chemgeo.2003.12.025

2046

Yin, X, Kulkarni, AC and Friedrich, MW (2019) DNA and RNA stable isotope probing of methylotrophic methanogenic archaea. In: Dumont, M and Hernández García, M (eds.) Stable Isotope Probing. Methods in Molecular Biology, 2046. Humana, New York, NY, 189-206. doi:10.1007/978-1-4939-9721-3_15

204

Abegg, F, Bohrmann, G and Kuhs, W (2006) Data Report: Shapes and structures of gas hydrates imaged by computed tomographic analyses, ODP Leg 204, Hydrate Ridge. In: Tréhu, AM, Bohrmann, G, Torres, ME and Colwell, FS (eds.) Proceedings of the Ocean Drilling Program. Scientific Results, 204. College Station, TX (Ocean Drilling Program), 1-11. doi:10.2973/odp.proc.sr.204.122.2006 PANGAEA Supplementary Data

Schouten, S, Hopmans, EC, Schefuß, E and Sinninghe Damsté, JS (2002) Distributional variations in marine crenarchaeotal membrane lipids: a new tool for reconstructing ancient sea water temperatures? Earth and Planetary Science Letters, 204(1-2). 265-274. doi:10.1016/S0012-821X(02)00979-2

Tréhu, AM, Torres, ME, Bohrmann, G and Colwell, FS (2006) Leg 204 Synthesis: Gas Hydrate Distribution and Dynamics in the Central Cascadia Accretionary Complex. In: Tréhu, AM, Bohrmann, G, Torres, ME and Colwell, FS (eds.) Proceedings of the Ocean Drilling Program, Scientific Results. College Station, TX (Ocean Drilling Program), 1-41. doi:10.2973/odp.proc.sr.204.101.2006

Volbers, ANA and Henrich, R (2004) Calcium carbonate corrosiveness in the South Atlantic during the Last Glacial Maximum as inferred from changes in the preservation of Globigerina bulloides: A proxy to determine deep-water circulation patterns? Marine Geology, 204(1-2). 43-57. doi:10.1016/S0025-3227(03)00372-4 PANGAEA Supplementary Data

203

Greinert, J, Bollwerk, S, Derkachev, AN, Bohrmann, G and Suess, E (2002) Massive barite deposits and carbonate mineralization in the Derugin Basin, Sea of Okhotsk: Precipitation process at cold vent sites. Earth and Planetary Science Letters, 203. 165-180. doi:10.1016/S0012-821X(02)00830-0 PANGAEA Supplementary Data

Huguet, A, Meador, TB, Laggoun-Défarge, F, Könneke, M, Wu, W, Derenne, S and Hinrichs, KU (2017) Production rates of bacterial tetraether lipids and fatty acids in peatland under varying oxygen concentrations. Geochimica et Cosmochimica Acta, 203. 103-116. doi:10.1016/j.gca.2017.01.012

2016

Gagen, EJ, Yoshinaga, MY, Garcia Prado, F, Hinrichs, KU and Thomm, M (2016) The proteome and lipidome of Thermococcus kodakarensisacross the stationary phase. Archaea, 2016. 1-15. doi:10.1155/2016/5938289

2012

Yoshinaga, MY, Wörmer, L, Elvert, M and Hinrichs, KU (2012) Novel Cardiolipins from Uncultured Methane-Metabolizing Archaea. Archaea-An International Microbiological Journal, 2012. doi:10.1155/2012/832097 PANGAEA Supplementary Data

201

Blake, RE, Surkov, AV, Böttcher, ME, Ferdelman, TG and Jørgensen, BB (2006) Oxygen isotope composition of dissolved sulfate in deep-sea sediments: Eastern Equatorial Pacific Ocean. In: Jørgensen, BB, d'Hondt, SL and Miller, J (eds.) Proceedings of the Ocean Drilling Program. Scientific Results, 201. College Station, TX (Ocean Drilling Program), 1-23. doi:10.2973/odp.proc.sr.201.116.2006 PANGAEA Supplementary Data

Böttcher, ME, Ferdelman, TG, Jørgensen, BB, Blake, RE, Surkov, AV and Claypool, GE (2006) Sulfur isotope fractionation by the deep biosphere within sediments of the Eastern Equatorial Pacific and Peru Margin. In: Jørgensen, BB, d'Hondt, SL and Miller, D (eds.) Proceedings of the Ocean Drilling Program. Scientific Results, 201. College Station, TX (Ocean Drilling Program), 1-21. doi:10.2973/odp.proc.sr.201.109.2006 PANGAEA Supplementary Data

Jørgensen, BB, d'Hondt, SL and Miller, DJ (2006) Leg 201 Synthesis: Controls on microbial communities in deeply buried sediments. In: Jørgensen, BB, d'Hondt, SL and Miller, DJ (eds.) Proceedings of the Ocean Drilling Program. Scientific Results, 201. College Station, TX (Ocean Drilling Program), 1-45. doi:10.2973/odp.proc.sr.201.101.2006

Spivack, AJ, McNeil, C, Holm, NG and Hinrichs, KU (2006) Determination of in situ methane based on analysis of void gas. In: Jørgensen, BB, d'Hondt, SL and Miller, DJ (eds.) Proceedings of the Ocean Drilling Program. Scientific Results, 201. College Station, TX (Ocean Drilling Program), 1-11. doi:10.2973/odp.proc.sr.201.119.2006 PANGAEA Supplementary Data

Torres, ME, McManus, J, Tyron, MD, Brown, KM, Hammond, DE, Colbert, S, Suess, E and Heeschen, KU (2002) Fluid and chemical fluxes in and out of sediments hosting methane hydrate deposit on Hydrate Ridge, OR: I. Hydrological provinces. Earth and Planetary Science Letters, 201. 525-540. doi:10.1016/S0012-821X(02)00733-1

200

Corzett, CH, Elsherbini, J, Chien, DM, Hehemann, JH, Henschel, A, Preheim, SP, Yu, X, Alm, EJ, Polz, MF and DiRita, VJ (2018) Evolution of a vegetarian vibrio: metabolic specialization of Vibrio breoganii to macroalgal substrates. Journal of Bacteriology, 200(15). doi:10.1128/JB.00020-18

20

Arvidson, RS, Fischer, C, Sawyer, DS, Scott, GD, Natelson, D and Lüttge, A (2014) Lateral resolution enhancement of vertical scanning interferometry by sub-pixel sampling. Microscopy and Microanalysis, 20(1). 90-98. doi:10.1017/S1431927613013822

Chen, J, Robb, CS, Unfried, F, Kappelmann, L, Markert, S, Song, T, Harder, J, Avci, B, Becher, D, Xie, P, Amann, RI, Hehemann, JH, Schweder, T and Teeling, H (2018) Alpha- and beta-mannan utilization by marine Bacteroidetes. Environmental Microbiology, 20(11). 4127-4140. doi:10.1111/1462-2920.14414

Elvert, M, Boetius, A, Knittel, K and Jørgensen, BB (2003) Characterization of specific membrane fatty acids as chemotaxonomic markers for sulfate-reducing bacteria involved in anaerobic oxidation of methane. Geomicrobiology Journal, 20(4). 403-419. doi:10.1080/01490450303894 PANGAEA Supplementary Data

Krukenberg, V, Riedel, D, Gruber-Vodicka, HR, Buttigieg, PL, Tegetmeyer, HE, Boetius, A and Wegener, G (2018) Gene expression and ultrastructure of meso- and thermophilic methanotrophic consortia. Environmental Microbiology, 20(5). 1651-1666. doi:10.1111/1462-2920.14077

Mills, HJ, de Leeuw, J, Hinrichs, KU, Inagaki, F and Kallmeyer, J (2015) Advancing subsurface biosphere and paleoclimate research: ECORD–ICDP–DCO–J-DESC–MagellanPlus Workshop Series Program Report. Scientific Drilling, 20. 59-65. doi:10.5194/sd-20-59-2015

Mollenhauer, G, Kienast, M, Lamy, F, Meggers, H, Schneider, RR, Hayes, JM and Eglinton, TI (2005) An evaluation of 14C age relationships between co-occurring foraminifera, alkenones, and total organic carbon in continental margin sediments. Paleoceanography, 20. PA1016. doi:10.1029/2004PA001103 PANGAEA Supplementary Data

Sievert, S, Kiene, RP and Schulz-Vogt, HN (2007) The Sulfur Cycle. In: Proctor, LM and Karl, DM (eds.) A Sea of Microbes. Special Issue. Oceanography, 20(2). The Oceanography Society , 117-123. ISBN doi:10.5670/oceanog.2007.55

2

Bühring, S, Ehrenhauss, S, Kamp, A, Moodley, L and Witte, U (2006) POC processing in a sublittoral sandy sediment: pulse chase experiment with 13C-labelled diatoms. Marine Biology Research, 2. 120-129. doi:10.1080/17451000600678773

Hettle, AG, Hobbs, JK, Pluvinage, B, Vickers, C, Abe, KT, Salama-Alber, O, McGuire, BE, Hehemann, JH, Hui, JPM, Berrue, F, Banskota, A, Zhang, J, Bottos, EM, Van Hamme, J and Boraston, AB (2019) Insights into the κ/ι-carrageenan metabolism pathway of some marine Pseudoalteromonas species. Communications Biology, 2(1). doi:10.1038/s42003-019-0721-y

Joye, SB, Samarkin, VA, Orcutt, BN, MacDonald, IR, Hinrichs, KU, Elvert, M, Teske, AP, Lloyd, KG, Montoya, JP and Meile, CD (2009) Metabolic variability in seafloor brines revealed by carbon and sulphur dynamics. Nature Geosciences, 2. 349-354. doi:10.1038/ngeo475

Marcon, Y, Sahling, H and Bohrmann, G (2013) LAPM: a tool for underwater large-area photo-mosaicking. Geoscientific Instrumentation, Methods and Data Systems, 2(2). 189-198. doi:10.5194/gi-2-189-2013 PANGAEA Supplementary Data

Niemann, H, Elvert, M, Hovland, M, Orcutt, B, Judd, A, Suck, I, Gutt, J, Joye, S, Damm, E, Finster, K and Boetius, A (2005) Methane emission and consumption at a North Sea gas seep (Tommeliten area). Biogeosciences, 2(4). 335-351.

Zhang, CL, Wang, J, Zhu, C, Huang, L and Dong, H (2012) Production of branched tetraether lipids in the lower Pearl River and estuary: effects of extraction methods and impact on bGDGT proxies. Frontiers in Microbiology, 2(274). doi:10.3389/fmicb.2011.00274

199

Teichert, BMA and Bohrmann, G (2006) Data report: composition of authigenic carbonates in sediments of the Cascadia accretionary prism, ODP Leg 204. In: Tréhu, AM, Bohrmann, G, Torres, ME and Colwell, FS (eds.) Proceedings of the Ocean Drilling Program. Scientific Results, 199. College Station, TX (Ocean Drilling Program), 1-8. doi:10.2973/odp.proc.sr.204.116.2006 PANGAEA Supplementary Data

198

Linse, K, Römer, M, Little, CTS, Marcon, Y and Bohrmann, G (2022) Megabenthos habitats influenced by nearby hydrothermal activity on the Sandwich Plate, Southern Ocean. Deep Sea Research Part II: Topical Studies in Oceanography, 198. 105075. doi:10.1016/j.dsr2.2022.105075

196

Korger, EIM and Schlindwein, V (2014) Seismicity and structure of the 85°E volcanic complex at the ultraslow spreading Gakkel Ridge from local earthquake tomography. Geophysical Journal International, 196(1). 539-551. doi:10.1093/gji/ggt390

Laglera, LM, Tovar-Sánchez, A, Iversen, MH, González, HE, Naik, H, Mangesh, G, Assmy, P, Klaas, C, Mazzocchi, MG, Montresor, M, Naqvi, SWA, Smetacek, V and Wolf-Gladrow, DA (2017) Iron partitioning during LOHAFEX: Copepod grazing as a major driver for iron recycling in the Southern Ocean. Marine Chemistry, 196. 148-161. doi:10.1016/j.marchem.2017.08.011

Zhuang, GC, Lin, YS, Bowles, MW, Heuer, VB, Lever, MA, Elvert, M and Hinrichs, KU (2017) Distribution and isotopic composition of trimethylamine, dimethylsulfide and dimethylsulfoniopropionate in marine sediments. Marine Chemistry, 196. 35-46. doi:10.1016/j.marchem.2017.07.007 PANGAEA Supplementary Data

191

Hartman, SE, Bett, BJ, Durden, JM, Henson, SA, Iversen, M, Jeffreys, RM, Horton, T, Lampitt, R and Gates, AR (2021) Enduring science: Three decades of observing the Northeast Atlantic from the Porcupine Abyssal Plain Sustained Observatory (PAP-SO). Progress in Oceanography, 191. 102508. doi:10.1016/j.pocean.2020.102508

190

Antunes, A, Rainey, FA, Wanner, G, Taborda, M, Pätzold, J, Nobre, MF, da Costa, MS and Huber, R (2008) A new lineage of halophilic, wall-less, contractile bacteria from a brine-filled deep of the Red Sea. Journal of Bacteriology, 190(10). 3580-3587. doi:10.1128/JB.01860-07

Beck, M, Reckhardt, A, Amelsberg, J, Bartholomä, A, Brumsack, HJ, Cypionka, H, Dittmar, T, Engelen, B, Greskowiak, J, Hillebrand, H, Holtappels, M, Neuholz, R, Köster, J, Kuypers, MMM, Massmann, G, Meier, D, Niggemann, J, Paffrath, R, Pahnke, K, Rovo, S, Striebel, M, Vandieken, V, Wehrmann, A and Zielinski, O (2017) The drivers of biogeochemistry in beach ecosystems: A cross-shore transect from the dunes to the low-water line. Marine Chemistry, 190. 35-50. doi:10.1016/j.marchem.2017.01.001

Gomez-Saez, GV, Niggemann, J, Dittmar, T, Pohlabeln, AM, Lang, SQ, Noowong, A, Pichler, T, Wörmer, L and Bühring, SI (2016) Molecular evidence for abiotic sulfurization of dissolved organic matter in marine shallow hydrothermal systems. Geochimica et Cosmochimica Acta, 190. 35-52. doi:10.1016/j.gca.2016.06.027 PANGAEA Supplementary Data

19

Cardini, U, Bednarz, VN, van Hoytema, N, Rovere, A, Naumann, MS, Al-Rshaidat, MMD and Wild, C (2016) Budget of primary production and dinitrogen fixation in a highly seasonal Red Sea coral reef. Ecosystems, 19(5). 771-785. doi:10.1007/s10021-016-9966-1

Elling, FJ, Könneke, M, Nicol, GW, Stieglmeier, M, Bayer, B, Spieck, E, de la Torre, JR, Becker, KW, Thomm, M, Prosser, JI, Herndl, GJ, Schleper, C and Hinrichs, KU (2017) Chemotaxonomic characterisation of the thaumarchaeal lipidome. Environmental Microbiology, 19(7). 2681-2700. doi:10.1111/1462-2920.13759

Flores, E, Cantarero, SI, Ruiz-Fernández, P, Dildar, N, Zabel, M, Ulloa, O and Sepúlveda, J (2022) Bacterial and eukaryotic intact polar lipids point to in situ production as a key source of labile organic matter in hadal surface sediment of the Atacama Trench. Biogeosciences, 19(5). 1395-1420. doi:10.5194/bg-19-1395-2022

Gensel, J, Humphries, MS, Zabel, M, Sebag, D, Hahn, A and Schefuß, E (2022) Origin, transport, and retention of fluvial sedimentary organic matter in South Africa's largest freshwater wetland, Mkhuze Wetland System. Biogeosciences, 19(11). 2881-2902. doi:10.5194/bg-19-2881-2022

Hehemann, JH, Truong, LV, Unfried, F, Welsch, N, Kabisch, J, Heiden, SE, Junker, S, Becher, D, Thürmer, A, Daniel, R, Amann, R and Schweder, T (2017) Aquatic adaptation of a laterally acquired pectin degradation pathway in marine gammaproteobacteria. Environmental Microbiology, 19(6). 2320-2333. doi:10.1111/1462-2920.13726

Helmke, P, Romero, OE and Fischer, G (2005) Northwest African upwelling and its effect on off-shore organic carbon export to the deep sea. Global Biogeochemical Cycles, 19(4). GB4015. doi:10.1029/2004GB002265 PANGAEA Supplementary Data

Liu, CH, Huang, X, Xie, TN, Duan, N, Xue, YR, Zhao, TX, Lever, MA, Hinrichs, KU and Inagaki, F (2017) Exploration of cultivable fungal communities in deep coal-bearing sediments from ∼1.3 to 2.5 km below the ocean floor. Environmental Microbiology, 19(2). 803-818. doi:10.1111/1462-2920.13653

Probandt, D, Knittel, K, Tegetmeyer, HE, Ahmerkamp, S, Holtappels, M and Amann, R (2017) Permeability shapes bacterial communities in sublittoral surface sediments. Environmental Microbiology, 19(4). 1584-1599. doi:10.1111/1462-2920.13676

Seiter, K, Hensen, C and Zabel, M (2005) Benthic carbon mineralization on a global scale. Global Biogeochemical Cycles, 19. GB1010. doi:10.1029/2004GB002225 PANGAEA Supplementary Data

Vigderovich, H, Eckert, W, Elul, M, Rubin-Blum, M, Elvert, M and Sivan, O (2022) Long-term incubations provide insight into the mechanisms of anaerobic oxidation of methane in methanogenic lake sediments. Biogeosciences, 19(8). 2313-2331. doi:10.5194/bg-19-2313-2022

Wisshak, M, Schönberg, CHL, Form, A and Freiwald, A (2013) Effects of ocean acidification and global warming on reef bioerosion—lessons from a clionaid sponge. Aquatic Biology, 19(2). 111-127. doi:10.3354/ab00527 PANGAEA Supplementary Data

189

Iversen, MH and Lampitt, RS (2020) Size does not matter after all: No evidence for a size-sinking relationship for marine snow. Progress in Oceanography, 189. 102445. doi:10.1016/j.pocean.2020.102445

Luo, G, Yang, H, Algeo, TJ, Hallmann, C and Xie, S (2019) Lipid biomarkers for the reconstruction of deep-time environmental conditions. Earth-Science Reviews, 189. 99-124. doi:10.1016/j.earscirev.2018.03.005

de Jonge, DSW, Stratmann, T, Lins, L, Vanreusel, A, Purser, A, Marcon, Y, Rodrigues, CF, Ravara, A, Esquete, P, Cunha, MR, Simon-Lledó, E, van Breugel, P, Sweetman, AK, Soetaert, K and van Oevelen, D (2020) Abyssal food-web model indicates faunal carbon flow recovery and impaired microbial loop 26 years after a sediment disturbance experiment. Progress in Oceanography, 189. 102446. doi:10.1016/j.pocean.2020.102446

188

Braun, S, Morono, Y, Becker, KW, Hinrichs, KU, Kjeldsen, KU, Jørgensen, BB and Lomstein, BA (2016) Cellular content of biomolecules in sub-seafloor microbial communities. Geochimica et Cosmochimica Acta, 188. 330-351. doi:10.1016/j.gca.2016.06.019

187

Zhuang, GC, Elling, FJ, Nigro, LM, Samarkin, VA, Joye, SB, Teske, A and Hinrichs, KU (2016) Multiple evidence for methylotrophic methanogenesis as the dominant methanogenic pathway in hypersaline sediments from the Orca Basin, Gulf of Mexico. Geochimica et Cosmochimica Acta, 187. 1-20. doi:10.1016/j.gca.2016.05.005 PANGAEA Supplementary Data

1863

Lemaire, ON, Hahn, CJ, Kahnt, J, Engilberge, S, Wegener, G and Wagner, T (2022) F420 as a cross-road in the bioenergetics of the ethane oxidation coupled to sulfate reduction. Biochimica et Biophysica Acta (BBA) - Bioenergetics, 1863. 148805. doi:10.1016/j.bbabio.2022.148805

186

Gingele, F and Schmieder, F (2001) Anomalous South Atlantic lithologies confirm global scale of unusual mid-Pleistocene climate excursion. Earth and Planetary Science Letters, 186(1). 93-101. doi:10.1016/S0012-821X(01)00234-5

Romero, OE and Hensen, C (2002) Oceanographic control of biogenic opal and diatoms in surface sediments of the South Western Atlantic. Marine Geology, 186(3-4). 263-280. doi:10.1016/S0025-3227(02)00210-4 PANGAEA Supplementary Data

185

Unger, D and Jennerjahn, TC (2009) Impact of regional Indian Ocean characteristics on the biogeochemical variability of settling particles. In: Wiggert, JD, Hood, RR, Wajih, S, Naqvi, A, Brink, KH and Smith, SL (eds.) Indian Ocean Biogeochemical Processes and Ecological Variability. American Geophysical Union, Washington, D. C., 257-280. doi:10.1029/2008GM000703 PANGAEA Supplementary Data

184

Baker, CA, Estapa, ML, Iversen, MH, Lampitt, R and Buesseler, K (2020) Are all sediment traps created equal? An intercomparison study of carbon export methodologies at the PAP-SO site. Progress in Oceanography, 184. 102317. doi:10.1016/j.pocean.2020.102317

Wiedicke, M, Sahling, H, Beiersdorf, H, Delisle, G, Faber, E, Marchig, V, Weiss, W, Mirbach, NV and Afiat, A (2002) Characteristics of an active vent in the fore-arc basin of the Sunda arc, Indonesia. Marine Geology, 184(1-2). 121-141. doi:10.1016/S0025-3227(01)00278-X

183

Liu, XL, Birgel, D, Elling, FJ, Sutton, PA, Lipp, JS, Zhu, R, Zhang, C, Könneke, M, Peckmann, JL, Rowland, SJ, Summons, RE and Hinrichs, KU (2016) From ether to acid: A plausible degradation pathway of glycerol dialkyl glycerol tetraethers. Geochimica et Cosmochimica Acta, 183. 138-152. doi:10.1016/j.gca.2016.04.016

182

de Leeuw, JW, Versteegh, GJM and van Bergen, PF (2006) Biomacromolecules of plants and algae and their fossil analogues. Plant Ecology, 182(1-2). 209-233. doi:10.1007/978-1-4020-4443-4_14

180

Vorrath, ME, Lahajnar, N, Fischer, G, Libuku, VM, Schmidt, M and Emeis, KC (2018) Spatiotemporal variation of vertical particle fluxes and modelled chlorophyll a standing stocks in the Benguela Upwelling System. Journal of Marine Systems, 180. 59-75. doi:10.1016/j.jmarsys.2017.12.002

18

De Prunelé, A, Ruffine, L, Riboulot, V, Peters, CA, Croguennec, C, Guyader, V, Pape, T, Bollinger, C, Bayon, G, Caprais, JC, Germain, Y, Donval, JP, Marsset, T, Bohrmann, G, Géli, L, Rabiu, A, Lescanne, M, Cauquil, E and Sultan, N (2017) Focused hydrocarbon-migration in shallow sediments of a pockmark cluster in the Niger Delta (Off Nigeria). Geochemistry, Geophysics, Geosystems, 18(1). 93-112. doi:10.1002/2016GC006554

Elling, FJ, Becker, KW, Könneke, M, Schröder, JM, Kellermann, MY, Thomm, M and Hinrichs, KU (2016) Respiratory quinones in Archaea: phylogenetic distribution and application as biomarkers in the marine environment. Environmental Microbiology, 18. 692-707. doi:10.1111/1462-2920.13086

Fischer, G, Romero, OE, Karstensen, J, Baumann, KH, Moradi, N, Iversen, MH, Ruhland, G, Klann, M and Körtzinger, A (2021) Seasonal flux patterns and carbon transport from low-oxygen eddies at the Cape Verde Ocean Observatory: lessons learned from a time series sediment trap study (2009–2016). Biogeosciences, 18(24). 6479-6500. doi:10.5194/bg-18-6479-2021

Freitas, FS, Pika, PA, Kasten, S, Jørgensen, BB, Rassmann, J, Rabouille, C, Thomas, S, Sass, H, Pancost, RD and Arndt, S (2021) New insights into large-scale trends of apparent organic matter reactivity in marine sediments and patterns of benthic carbon transformation. Biogeosciences, 18(15). 4651-4679. doi:10.5194/bg-18-4651-2021

Heeschen, KU, Keir, R, Rehder, G, Klatt, O and Suess, E (2004) Methane dynamics in the Weddell Sea determined via stable isotope ratios and CFC-11. Global Biogeochemical Cycles, 18(2). GB2012. doi:10.1029/2003GB002151

Häusler, S, Weber, M, de Beer, D and Ionescu, D (2014) Spatial distribution of diatom and cyanobacterial mats in the Dead Sea is determined by response to rapid salinity fluctuations. Extremophiles, 18(6). 1085-1094. doi:10.1007/s00792-014-0686-1

Krukenberg, V, Harding, K, Richter, M, Glöckner, FO, Gruber-Vodicka, HR, Adam, B, Berg, JS, Knittel, K, Tegetmeyer, HE, Boetius, A and Wegener, G (2016) Candidatus Desulfofervidus auxilii, a hydrogenotrophic sulfate-reducing bacterium involved in the thermophilic anaerobic oxidation of methane. Environmental Microbiology, 18(9). 3073-3091. doi:10.1111/1462-2920.13283

Lazar, CS, Baker, BJ, Seitz, K, Hyde, AS, Dick, GJ, Hinrichs, KU and Teske, AP (2016) Genomic evidence for distinct carbon substrate preferences and ecological niches of Bathyarchaeota in estuarine sediments. Environmental Microbiology, 18(4). 1200-1211. doi:10.1111/1462-2920.13142

Meier, DV, Bach, W, Girguis, PR, Gruber-Vodicka, HR, Reeves, EP, Richter, M, Vidoudez, C, Amann, R and Meyerdierks, A (2016) Heterotrophic Proteobacteria in the vicinity of diffuse hydrothermal venting. Environmental Microbiology, 18(12). 4348-4368. doi:10.1111/1462-2920.13304 PANGAEA Supplementary Data

Sturt, HF, Summons, RE, Smith, KJ, Elvert, M and Hinrichs, KU (2004) Intact polar membrane lipids in prokaryotes and sediments deciphered by ESI-HPLC-MSn - new biomarkers for biogeochemistry and microbial ecology. Rapid Communications in Mass Spectrometry, 18. 617-628. doi:10.1002/rcm.1378

Versteegh, GJM, Koschinsky, A, Kuhn, T, Preuss, I and Kasten, S (2021) Geochemical consequences of oxygen diffusion from the oceanic crust into overlying sediments and its significance for biogeochemical cycles based on sediments of the northeast Pacific. Biogeosciences, 18(17). 4965-4984. doi:10.5194/bg-18-4965-2021

Widderich, N, Czech, L, Elling, FJ, Könneke, M, Stöveken, N, Pittelkow, M, Riclea, R, Dickschat, JS, Heider, J and Bremer, E (2016) Strangers in the archaeal world: osmostress-responsive biosynthesis of ectoine and hydroxyectoine by the marine thaumarchaeon Nitrosopumilus maritimus. Environmental Microbiology, 18(4). 1227-1248. doi:10.1111/1462-2920.13156

Yao, M, Elling, FJ, Jones, CA, Nomosatryo, S, Long, CP, Crowe, SA, Antoniewicz, MR, Hinrichs, KU and Maresca, JA (2015) Heterotrophic bacteria from an extremely phosphate-poor lake have conditionally reduced phosphorus demand and utilize diverse sources of phosphorus. Environmental Microbiology, 18(2). 656-667. doi:10.1111/1462-2920.13063

178

Klein, F, Bach, W and McCollom, TM (2013) Compositional controls on hydrogen generation during serpentinization of ultramafic rocks. Lithos, 178. 55-69. doi:10.1016/j.lithos.2013.03.008

177

Adler, M, Hensen, C, Wenzhöfer, F, Pfeifer, K and Schulz, HD (2001) Modelling of calcite dissolution by oxic respiration in supralysoclinal deep-sea sediments. Marine Geology, 177(1-2). 167-189. doi:10.1016/S0025-3227(01)00130-X

Freudenthal, T, Neuer, S, Meggers, H, Davenport, R and Wefer, G (2001) Influence of lateral particle advection and organic matter degradation on sediment accumulation and stable nitrogen isotope ratios along a productivity gradient in the Canary Islands region. Marine Geology, 177. 93-109.

Gomez-Saez, GV, Riedel, T, Niggemann, J, Pichler, T, Dittmar, T and Bühring, SI (2015) Interaction between iron and dissolved organic matter in a marine shallow hydrothermal system off Dominica Island (Lesser Antilles). Marine Chemistry, 177. 677-686. doi:10.1016/j.marchem.2015.10.003 PANGAEA Supplementary Data

Klump, J, Hebbeln, D and Wefer, G (2001) High concentration of biogenic barium in Pacific sediments after Termination I - a signal of changes in productivity and deep water chemistry. Marine Geology, 177(1-2). 1-11. doi:10.1016/S0025-3227(01)00120-7 PANGAEA Supplementary Data

Pfeifer, K, Kasten, S, Hensen, C and Schulz, HD (2001) Reconstruction of primary productivity from the barium contents in surface sediments of the South Atlantic Ocean. Marine Geology, 177(1-2). 13-24. doi:10.1016/S0025-3227(01)00121-9 PANGAEA Supplementary Data

176

Zabel, M and Schulz, HD (2001) Importance of submarine landslides for non-steady state conditions in pore water systems - lower Zaire (Congo) deep-sea fan. Marine Geology, 176(1-4). 87-99. doi:10.1016/S0025-3227(01)00164-5 PANGAEA Supplementary Data

175

Bartetzko, A (2008) Gamma ray spectrometric analysis of hydrothermally altered dacite samples from the PACMANUS hydrothermal field: Implications for the interpretation of gamma ray wireline measurements. Journal of Volcanology and Geothermal Research, 175. 269-277. doi:10.1016/j.jvolgeores.2008.03.014

Iversen, MH and Robert, ML (2015) Ballasting effects of smectite on aggregate formation and export from a natural plankton community. Marine Chemistry, 175. 18-27. doi:10.1016/j.marchem.2015.04.009

174

Camoying, MG, Thoms, S, Geuer, JK, Koch, BP, Bischof, K and Trimborn, S (2022) In contrast to diatoms, cryptophytes are susceptible to iron limitation, but not to ocean acidification. Physiologia Plantarum, 174(1). doi:10.1111/ppl.13614

173

Kleint, C, Kuzmanovski, S, Powell, Z, Bühring, SI, Sander, SG and Koschinsky, A (2015) Organic Cu-complexation at the shallow marine hydrothermal vent fields off the coast of Milos (Greece), Dominica (Lesser Antilles) and the Bay of Plenty (New Zealand). Marine Chemistry, 173. 244-252. doi:10.1016/j.marchem.2014.10.012 PANGAEA Supplementary Data

171

Elling, FJ, Könneke, M, Mußmann, M, Greve, A and Hinrichs, KU (2015) Influence of temperature, pH, and salinity on membrane lipid composition and TEX86 of marine planktonic thaumarchaeal isolates. Geochimica et Cosmochimica Acta, 171. 238-255. doi:10.1016/j.gca.2015.09.004

170

Garming, JFL, von Dobeneck, T, Franke, C and Bleil, U (2007) Low-temperature partial magnetic self-reversal in marine sediments by magnetostatic interaction of titanomagnetite and titanohematite intergrowths. Geophysical Journal International, 170(3). 1067-1075. doi:10.1111/j.1365-246X.2007.03504.x

17

Bizic-Ionescu, M, Zeder, M, Ionescu, D, Orlić, S, Fuchs, BM, Grossart, HP and Amann, R (2015) Comparison of bacterial communities on limnic versus coastal marine particles reveals profound differences in colonization. Environmental Microbiology, 17(10). 3500-3514. doi:10.1111/1462-2920.12466

Coffinet, S, Meador, TB, Mühlena, L, Becker, KW, Schröder, J, Zhu, QZ, Lipp, JS, Heuer, VB, Crump, MP and Hinrichs, KU (2020) Structural elucidation and environmental distributions of butanetriol and pentanetriol dialkyl glycerol tetraethers (BDGTs and PDGTs). Biogeosciences, 17(2). 317-330. doi:10.5194/bg-17-317-2020

Debevec, C, Sauvage, S, Gros, V, Sciare, J, Pikridas, M, Stavroulas, I, Salameh, T, Leonardis, T, Gaudion, V, Depelchin, L, Fronval, I, Sarda-Esteve, R, Baisnée, D, Bonsang, B, Savvides, C, Vrekoussis, M and Locoge, N (2017) Origin and variability in volatile organic compounds observed at an Eastern Mediterranean background site (Cyprus). Atmospheric Chemistry and Physics, 17(18). 11355-11388. doi:10.5194/acp-17-11355-2017

Geprägs, P, Torres, ME, Mau, S, Kasten, S, Römer, M and Bohrmann, G (2016) Carbon cycling fed by methane seepage at the shallow Cumberland Bay, South Georgia, sub-Antarctic. Geochemistry, Geophysics, Geosystems, 17(4). 1401-1418. doi:10.1002/2016GC006276 PANGAEA Supplementary Data

Hahnke, RL, Bennke, CM, Fuchs, BM, Mann, AJ, Rhiel, E, Teeling, H, Amann, R and Harder, J (0201) Dilution cultivation of marine heterotrophic bacteria abundant after a spring phytoplankton bloom in the North Sea. Environmental Microbiology, 17(10). 3515-3526. doi:10.1111/1462-2920.12479

Lazar, CS, Biddle, JF, Meador, TB, Blair, N, Hinrichs, KU and Teske, AP (2015) Environmental controls on intragroup diversity of the uncultured benthicarchaeaof the miscellaneous Crenarchaeotal group lineage naturally enriched in anoxic sediments of the White Oak River estuary (North Carolina, USA). Environmental Microbiology, 17(7). 2228-2238. doi:10.1111/1462-2920.12659

Lessa, D, Morard, R, Jonkers, L, Venancio, IM, Reuter, R, Baumeister, A, Albuquerque, AL and Kucera, M (2020) Distribution of planktonic foraminifera in the subtropical South Atlantic: depth hierarchy of controlling factors. Biogeosciences, 17(16). 4313-4342. doi:10.5194/bg-17-4313-2020

Meador, TB, Bowles, MW, Lazar, CS, Zhu, C, Teske, A and Hinrichs, KU (2015) The archaeal lipidome in estuarine sediment dominated by members of the Miscellaneous Crenarchaeotal Group. Environmental Microbiology, 17(7). 2441-2458. doi:10.1111/1462-2920.12716

Raulf, FF, Fabricius, K, Uthicke, S, de Beer, D, Abed, RMM and Ramette, A (2015) Changes in microbial communities in coastal sediments along natural CO2 gradients at a volcanic vent in Papua New Guinea. Environmental Microbiology, 17(10). 3678-3691. doi:10.1111/1462-2920.12729 PANGAEA Supplementary Data

Reuter, H, Gensel, J, Elvert, M and Zak, D (2020) Evidence for preferential protein depolymerization in wetland soils in response to external nitrogen availability provided by a novel FTIR routine. Biogeosciences, 17(2). 499-514. doi:10.5194/bg-17-499-2020

Romero, OE, Baumann, KH, Zonneveld, KAF, Donner, B, Hefter, J, Hamady, B, Pospelova, V and Fischer, G (2020) Flux variability of phyto- and zooplankton communities in the Mauritanian coastal upwelling between 2003 and 2008. Biogeosciences, 17(1). 187-214. doi:10.5194/bg-17-187-2020

Römer, M, Riedel, M, Scherwath, M, Heesemann, M and Spence, GD (2016) Tidally controlled gas bubble emissions: A comprehensive study using long-term monitoring data from the NEPTUNE cabled observatory offshore Vancouver Island. Geochemistry, Geophysics, Geosystems, 17(9). 3797-3814. doi:10.1002/2016GC006528 PANGAEA Supplementary Data

Schneider, B, Schlitzer, R, Fischer, G and Nöthig, EM (2003) Depth dependent elemental compositions of particle organic matter (POM) in the ocean. Global Biogeochemical Cycles, 17(2). 1032. doi:10.1029/2002GB001871

Schoening, T, Purser, A, Langenkämper, D, Suck, I, Taylor, J, Cuvelier, D, Lins, L, Simon-Lledó, E, Marcon, Y, Jones, DOB, Nattkemper, T, Köser, K, Zurowietz, M, Greinert, J and Gomes-Pereira, J (2020) Megafauna community assessment of polymetallic-nodule fields with cameras: platform and methodology comparison. Biogeosciences, 17(12). 3115-3133. doi:10.5194/bg-17-3115-2020

Versteegh, GJM, Houben, AJP and Zonneveld, KAF (2020) Better molecular preservation of organic matter in an oxic than in a sulfidic depositional environment: evidence from Thalassiphora pelagica (Dinoflagellata, Eocene) cysts. Biogeosciences, 17(13). 3545-3561. doi:10.5194/bg-17-3545-2020

Wippler, J, Kleiner, M, Lott, C, Gruhl, A, Abraham, PE, Giannone, RJ, Young, JC, Hettich, RL and Dubilier, N (2016) Transcriptomic and proteomic insights into innate immunity and adaptations to a symbiotic lifestyle in the gutless marine worm Olavius algarvensis. BMC Genomics, 17(1). doi:10.1186/s12864-016-3293-y

166

Liu, XL, Zhu, C, Wakeham, SG and Hinrichs, KU (2014) In situ production of branched glycerol dialkyl glycerol tetraethers in anoxic marine water columns. Marine Chemistry, 166. 1-8. doi:10.1016/j.marchem.2014.08.008

Serna, A, Lahajnar, N, Pätsch, J, Hebbeln, D and Emeis, KC (2014) Organic matter degradation in the German Bight/SE North Sea: Implications from stable nitrogen isotopes and amino acids. Marine Chemistry, 166. 103-113. doi:10.1016/j.marchem.2014.09.014 PANGAEA Supplementary Data

164

Yoshinaga, MY, Lazar, CS, Elvert, M, Lin, YS, Zhu, C, Heuer, VB, Teske, AP and Hinrichs, KU (2015) Possible roles of uncultured archaea in carbon cycling in methane-seep sediments. Geochimica et Cosmochimica Acta, 164. 35-52. doi:10.1016/j.gca.2015.05.003

162

Nierop, KGJ, Versteegh, GJM, Filley, TR and de Leeuw, JW (2019) Quantitative analysis of diverse sporomorph-derived sporopollenins. Phytochemistry, 162. 207-215. doi:10.1016/j.phytochem.2019.03.023

160

Zhuang, GC, Lin, YS, Elvert, M, Heuer, VB and Hinrichs, KU (2014) Gas chromatographic analysis of methanol and ethanol in marine sediment pore waters: Validation and implementation of three pretreatment techniques. Marine Chemistry, 160. 82-90. doi:10.1016/j.marchem.2014.01.011 PANGAEA Supplementary Data

16

Benthien, A, Andersen, N, Schulte, S, Müller, PJ, Schneider, RR and Wefer, G (2002) Carbon isotopic composition of the C37:2 alkenone in core-top sediments of the South Atlantic Ocean: Effects of CO2 and nutrient concentrations. Global Biogeochemical Cycles, 16(1). 1012. doi:10.1029/2001GB001433 PANGAEA Supplementary Data

Canion, A, Overholt, WA, Kostka, JE, Huettel, M, Lavik, G and Kuypers, MMM (2014) Temperature response of denitrification and anaerobic ammonium oxidation rates and microbial community structure in Arctic fjord sediments. Environmental Microbiology, 16(10). 3331-3344. doi:10.1111/1462-2920.12593

Drazen, JC, Leitner, AB, Morningstar, S, Marcon, Y, Greinert, J and Purser, A (2019) Observations of deep-sea fishes and mobile scavengers from the abyssal DISCOL experimental mining area. Biogeosciences, 16(16). 3133-3146. doi:10.5194/bg-16-3133-2019

Flintrop, CM, Rogge, A, Miksch, S, Thiele, S, Waite, AM and Iversen, MH (2018) Embedding and slicing of intact in situ collected marine snow. Limnology and Oceanography: Methods, 16(6). 339-355. doi:10.1002/lom3.10251

Glabonjat, RA, Raber, G, Jensen, KB, Schubotz, F, Boyd, ES and Francesconi, KA (2019) Origin of arsenolipids in sediments from Great Salt Lake. Environmental Chemistry, 16(5). 303. doi:10.1071/EN19135

Gobet, A, Boetius, A and Ramette, A (2013) Ecological coherence of diversity patterns derived from classical fingerprinting and Next Generation Sequencing techniques. Environmental Microbiology, 16(9). 2672-2681. doi:10.1111/1462-2920.12308

Hanz, U, Wienberg, C, Hebbeln, D, Duineveld, G, Lavaleye, M, Juva, K, Dullo, WC, Freiwald, A, Tamborrino, L, Reichart, GJ, Flögel, S and Mienis, F (2019) Environmental factors influencing benthic communities in the oxygen minimum zones on the Angolan and Namibian margins. Biogeosciences, 16(22). 4337-4356. doi:10.5194/bg-16-4337-2019

Jan, C, Petersen, JM, Werner, J, Teeling, H, Huang, S, Glöckner, FO, Golyshina, OV, Dubilier, N, Golyshin, PN, Jebbar, M and Cambon-Bonavita, MA (2014) The gill chamber epibiosis of deep-sea shrimp Rimicaris exoculata: an in-depth metagenomic investigation and discovery of Zetaproteobacteria. Environmental Microbiology, 16(9). 2723-2738. doi:10.1111/1462-2920.12406

Khimasia, A, Rovere, A and Pichler, T (2020) Hydrothermal areas, microbial mats and sea grass in Paleochori Bay, Milos, Greece. Journal of Maps, 16(2). 348-356. doi:10.1080/17445647.2020.1748131

Krupke, A, Lavik, G, Halm, H, Fuchs, BM, Amann, RI and Kuypers, MMM (2014) Distribution of a consortium between unicellular algae and the N2 fixing cyanobacterium UCYN-A in the North Atlantic Ocean. Environmental Microbiology, 16(10). 3153-3167. doi:10.1111/1462-2920.12431

Mevenkamp, L, Guilini, K, Boetius, A, De Grave, J, Laforce, B, Vandenberghe, D, Vincze, L and Vanreusel, A (2019) Responses of an abyssal meiobenthic community to short-term burial with crushed nodule particles in the south-east Pacific. Biogeosciences, 16(11). 2329-2341. doi:10.5194/bg-16-2329-2019

Mollenhauer, G, Schneider, RR, Müller, PJ, Spieß, V and Wefer, G (2002) Glacial/Interglacial variability in the Benguela upwelling system: Spatial distribution and budgets of organic carbon accumulation. Global Biogeochemical Cycles, 16(4). 1134. doi:10.1029/2001GB001488 PANGAEA Supplementary Data

Pjevac, P, Kamyshny, A, Dyksma, S and Mußmann, M (2014) Microbial consumption of zero-valence sulfur in marine benthic habitats. Environmental Microbiology, 16(11). 3416-3430. doi:10.1111/1462-2920.12410

Ramírez, GA, Mara, P, Sehein, T, Wegener, G, Chambers, CR, Joye, SB, Peterson, RN, Philippe, A, Burgaud, G, Edgcomb, VP and Teske, AP (2021) Environmental factors shaping bacterial, archaeal and fungal community structure in hydrothermal sediments of Guaymas Basin, Gulf of California. PLOS ONE, 16(9). e0256321. doi:10.1371/journal.pone.0256321

Reeves, EP, Yoshinaga, MY, Pjevac, P, Goldenstein, NI, Peplies, J, Meyerdierks, A, Amann, R, Bach, W and Hinrichs, KU (2014) Microbial lipids reveal carbon assimilation patterns on hydrothermal sulfide chimneys. Environmental Microbiology, 16(11). 3515-3532. doi:10.1111/1462-2920.12525

Rehder, G, Collier, RW, Heeschen, KU, Kosro, PM, Barth, JA and Suess, E (2002) Enhanced marine CH4 emissions to the atmosphere off Oregon caused by coastal upwelling. Global Biogeochmical Cycles, 16(3). 2-1-2-11. doi:10.1029/2000GB001391

Rogge, A, Flintrop, CM, Iversen, MH, Salter, I, Fong, AA, Vogts, A and Waite, AM (2018) Hard and soft plastic resin embedding for single-cell element uptake investigations of marine-snow-associated microorganisms using nano-scale secondary ion mass spectrometry. Limnology and Oceanography: Methods, 16(8). 484-503. doi:10.1002/lom3.10261

Schroeder, T, Bach, W, Jöns, N, Jöns, S, Monien, P and Klügel, A (2015) Fluid circulation and carbonate vein precipitation in the footwall of an oceanic core complex, Ocean Drilling Program Site 175, Mid-Atlantic Ridge. Geochemistry, Geophysics, Geosystems, 16(10). 3716-3732. doi:10.1002/2015GC006041

Solanki, V, Krüger, K, Crawford, CJ, Pardo-Vargas, A, Danglad-Flores, J, Hoang, KLM, Klassen, L, Abbott, DW, Seeberger, PH, Amann, RI, Teeling, H and Hehemann, JH (2022) Glycoside hydrolase from the GH76 family indicates that marine Salegentibacter sp. Hel_I_6 consumes alpha-mannan from fungi. The ISME Journal, 16(7). 1818-1830. doi:10.1038/s41396-022-01223-w

Takagi, H, Kimoto, K, Fujiki, T, Saito, H, Schmidt, C, Kucera, M and Moriya, K (2019) Characterizing photosymbiosis in modern planktonic foraminifera. Biogeosciences, 16(17). 3377-3396. doi:10.5194/bg-16-3377-2019

Wentrup, C, Wendeberg, A, Schimak, M, Borowski, C and Dubilier, N (2014) Forever competent: deep-sea bivalves are colonized by their chemosynthetic symbionts throughout their lifetime. Environmental Microbiology, 16(12). 3699-3713. doi:10.1111/1462-2920.12597

Winkel, M, de Beer, D, Lavik, G, Peplies, J and Mußmann, M (2013) Close association of active nitrifiers withBeggiatoamats covering deep-sea hydrothermal sediments. Environmental Microbiology, 16(6). 1612-1626. doi:10.1111/1462-2920.12316

Zimmermann, J, Lott, C, Weber, M, Ramette, A, Bright, M, Dubilier, N and Petersen, JM (2014) Dual symbiosis with co-occurring sulfur-oxidizing symbionts in vestimentiferan tubeworms from a Mediterranean hydrothermal vent. Environmental Microbiology, 16(12). 3638-3656. doi:10.1111/1462-2920.12427

von Appen, WJ, Strass, VH, Bracher, A, Xi, H, Hörstmann, C, Iversen, MH and Waite, AM (2020) High-resolution physical-biogeochemical structure of a filament and an eddy of upwelled water off northwest Africa. Ocean Science, 16(1). 253-270. doi:10.5194/os-16-253-2020

159

Romero, OE and Fischer, G (2017) Shift in the species composition of the diatom community in the eutrophic Mauritanian coastal upwelling: Results from a multi-year sediment trap experiment (2003–2010). Progress in Oceanography, 159. 31-44. doi:10.1016/j.pocean.2017.09.010

158

Ritt, B, Pierre, C, Gauthier, O, Wenzhöfer, F, Boetius, A and Sarrazin, J (2011) Diversity and distribution of cold-seep fauna associated with different geological and environmental settings at mud volcanoes and pockmarks of the Nile Deep-Sea Fan. Marine Biology, 158(6). 1187-1210. doi:10.1007/s00227-011-1679-6

157

Jöns, N, Bach, W and Schroeder, T (2009) Formation and alteration of plagiogranites in an ultramafic-hosted detachment fault at the Mid-Atlantic Ridge (ODP Leg 209). Mineralogy and Petrology, 157. 625-639. doi:10.1007/s00410-008-0357-2 PANGAEA Supplementary Data

Kusch, S, Mollenhauer, G, Willmes, C, Hefter, J, Eglinton, TI and Galy, V (2021) Controls on the age of plant waxes in marine sediments – A global synthesis. Organic Geochemistry, 157. 104259. doi:10.1016/j.orggeochem.2021.104259

156

Aromokeye, DA, Willis-Poratti, G, Wunder, LC, Yin, X, Wendt, J, Richter-Heitmann, T, Henkel, S, Vázquez, S, Elvert, M, Mac Cormack, W and Friedrich, MW (2021) Macroalgae degradation promotes microbial iron reduction via electron shuttling in coastal Antarctic sediments. Environment International, 156. 106602. doi:10.1016/j.envint.2021.106602

155

Boehnert, S, Birkelund, AR, Schmiedl, G, Kuhnert, H, Kuhn, G, Hass, HC and Hebbeln, D (2020) Test deformation and chemistry of foraminifera as response to anthropogenic heavy metal input. Marine Pollution Bulletin, 155. 111112. doi:10.1016/j.marpolbul.2020.111112

151

Ding, S, Lange, M, Lipp, J, Schwab, VF, Chowdhury, S, Pollierer, MM, Krause, K, Li, D, Kothe, E, Scheu, S, Welti, R, Hinrichs, KU and Gleixner, G (2020) Characteristics and origin of intact polar lipids in soil organic matter. Soil Biology and Biochemistry, 151. 108045. doi:10.1016/j.soilbio.2020.108045

150

French, KL, Leider, A and Hallmann, C (2020) Comparability and reproducibility of biomarker ratio values measured by GC-QQQ-MS. Organic Geochemistry, 150. 104124. doi:10.1016/j.orggeochem.2020.104124

15

Antia, AN, Koeve, W, Fischer, G, Blanz, T, Schulz-Bull, D, Scholten, J, Neuer, S, Kremling, K, Kuss, J, Peinert, R, Hebbeln, D, Bathmann, U, Conte, MH, Fehner, U and Zeitzschel, B (2001) Basin-wide particulate carbon flux in the Atlantic Ocean: Regional export patterns and potential for atmospheric CO2 sequestration. Global Biogeochemical Cycles, 15(4). 845-862. doi:10.1029/2000GB001376

Arnold, GL, Brunner, B, Müller, IA and Røy, H (2014) Modern applications for a total sulfur reduction distillation method - what’s old is new again. Geochemical Transactions, 15(4). doi:10.1186/1467-4866-15-4

Braeckman, U, Janssen, F, Lavik, G, Elvert, M, Marchant, H, Buckner, C, Bienhold, C and Wenzhöfer, F (2018) Carbon and nitrogen turnover in the Arctic deep sea: in situ benthic community response to diatom and coccolithophorid phytodetritus. Biogeosciences, 15(21). 6537-6557. doi:10.5194/bg-15-6537-2018 PANGAEA Supplementary Data

Canion, A, Prakash, O, Green, SJ, Jahnke, L, Kuypers, MMM and Kostka, JE (2013) Isolation and physiological characterization of psychrophilic denitrifying bacteria from permanently cold Arctic fjord sediments (Svalbard, Norway). Environmental Microbiology, 15(5). 1606-1618. doi:10.1111/1462-2920.12110

Lennartz, ST, von Hobe, M, Booge, D, Bittig, HC, Fischer, T, Gonçalves-Araujo, R, Ksionzek, KB, Koch, BP, Bracher, A, Röttgers, R, Quack, B and Marandino, CA (2019) The influence of dissolved organic matter on the marine production of carbonyl sulfide (OCS) and carbon disulfide (CS2) in the Peruvian upwelling. Ocean Science, 15(4). 1071-1090. doi:10.5194/os-15-1071-2019

Lin, YS, Lipp, JS, Elvert, M, Holler, T and Hinrichs, KU (2013) Assessing production of the ubiquitous archaeal diglycosyl tetraether lipids in marine subsurface sediment using intramolecular stable isotope probing. Environmental Microbiology, 15(5). 1634-1646. doi:10.1111/j.1462-2920.2012.02888.x

Nigro, LM, Elling, FJ, Hinrichs, KU, Joye, SB and Teske, A (2020) Microbial ecology and biogeochemistry of hypersaline sediments in Orca Basin. PLOS ONE, 15(4). e0231676. doi:10.1371/Journal.pone.0231676

Pape, T, Geprägs, P, Hammerschmidt, S, Wintersteller, P, Wei, J, Fleischmann, T, Bohrmann, G and Kopf, AJ (2014) Hydrocarbon seepage and its sources at mud volcanoes of the Kumano forearc basin, Nankai Trough subduction zone. Geochemistry, Geophysics, Geosystems, 15(6). 2180-2194. doi:10.1002/2013GC005057 PANGAEA Supplementary Data

Raggi, L, Schubotz, F, Hinrichs, KU, Dubilier, N and Petersen, JM (2013) Bacterial symbionts of Bathymodiolus mussels and Escarpia tubeworms from Chapopote, an asphalt seep in the southern Gulf of Mexico. Environmental Microbiology, 15(7). 1969-1987. doi:10.1111/1462-2920.12051

Reisky, L, Préchoux, A, Zühlke, MK, Bäumgen, M, Robb, CS, Gerlach, N, Roret, T, Stanetty, C, Larocque, R, Michel, G, Song, T, Markert, S, Unfried, F, Mihovilovic, MD, Trautwein-Schult, A, Becher, D, Schweder, T, Bornscheuer, UT and Hehemann, JH (2019) A marine bacterial enzymatic cascade degrades the algal polysaccharide ulvan. Nature Chemical Biology, 15(8). 803-812. doi:10.1038/s41589-019-0311-9

Schubotz, F, Xie, S, Lipp, JS, Hinrichs, KU and Wakeham, SG (2018) Intact polar lipids in the water column of the eastern tropical North Pacific: abundance and structural variety of non-phosphorus lipids. Biogeosciences, 15(21). 6481-6501. doi:10.5194/bg-15-6481-2018

Türke, A, Nakamura, K and Bach, W (2015) Palagonitization of Basalt Glass in the Flanks of Mid-Ocean Ridges: Implications for the Bioenergetics of Oceanic Intracrustal Ecosystems. Astrobiology, 15(10). 793-803. doi:10.1089/ast.2014.1255

van de Vossenberg, J, Woebken, D, Maalcke, WJ, Wessels, HJCT, Dutilh, BE, Kartal, B, Janssen-Megens, EM, Roeselers, G, Yan, J, Speth, D, Gloerich, J, Geerts, W, van der Biezen, E, Pluk, W, Francoijs, KJ, Russ, L, Lam, P, Malfatti, SA, Green Tringe, S, Haaijer, SCM, Op den Camp, HJM, Stunnenberg, HG, Amann, R, Kuypers, MMM and Jetten, MSM (2013) The metagenome of the marine anammox bacterium 'Candidatus Scalindua profunda' illustrates the versatility of this globally important nitrogen cycle bacterium. Environmental Microbiology, 15(5). 1275-1289. doi:10.1111/j.1462-2920.2012.02774.x

145

Dauner, ALL, Mollenhauer, G, Bícego, MC and Martins, CC (2020) Cluster analysis for time series based on organic geochemical proxies. Organic Geochemistry, 145. 104038. doi:10.1016/j.orggeochem.2020.104038

142

Heller, C, Kuhn, T, Versteegh, GJM, Wegorzewski, AV and Kasten, S (2018) The geochemical behavior of metals during early diagenetic alteration of buried manganese nodules. Deep Sea Research Part I: Oceanographic Research Papers, 142. 16-33. doi:10.1016/j.dsr.2018.09.008

141

Elling, FJ, Könneke, M, Lipp, JS, Becker, KW, Gagen, EJ and Hinrichs, KU (2014) Effects of growth phase on the membrane lipid composition of the thaumarchaeon Nitrosopumilus maritimus and their implications for archaeal lipid distributions in the marine environment. Geochimica et Cosmochimica Acta, 141. 579-597. doi:10.1016/j.gca.2014.07.005

Plümper, O, Beinlich, A, Bach, W, Janots, E and Austrheim, H (2014) Garnets within geode-like serpentinite veins: Implications for element transport, hydrogen production and life-supporting environment formation. Geochimica et Cosmochimica Acta, 141. 454-471. doi:10.1016/j.gca.2014.07.002

Schmidt, F, Koch, BP, Witt, M and Hinrichs, KU (2014) Extending the analytical window for water-soluble organic matter in sediments by aqueous Soxhlet extraction. Geochimica et Cosmochimica Acta, 141. 83-96. doi:10.1016/j.gca.2014.06.009 PANGAEA Supplementary Data

140

Volz, JB, Mogollón, JM, Geibert, W, Arbizu, PM, Koschinsky, A and Kasten, S (2018) Natural spatial variability of depositional conditions, biogeochemical processes and element fluxes in sediments of the eastern Clarion-Clipperton Zone, Pacific Ocean. Deep Sea Research Part I: Oceanographic Research Papers, 140. 159-172. doi:10.1016/j.dsr.2018.08.006 PANGAEA Supplementary Data

14

Al-Najjar, MAA, de Beer, D, Kühl, M and Polerecky, L (2012) Light utilization efficiency in photosynthetic microbial mats. Environmental Microbiology, 14(4). 982-992. doi:10.1111/j.1462-2920.2011.02676.x PANGAEA Supplementary Data

Assié, A, Leisch, N, Meier, DV, Gruber-Vodicka, HR, Tegetmeyer, HE, Meyerdierks, A, Kleiner, M, Hinzke, T, Joye, S, Saxton, M, Dubilier, N and Petersen, JM (2020) Horizontal acquisition of a patchwork Calvin cycle by symbiotic and free-living Campylobacterota (formerly Epsilonproteobacteria). The ISME Journal, 14(1). 104-122. doi:10.1038/s41396-019-0508-7

Bohrmann, G, Heeschen, KU, Jung, C, Weinrebe, WR, Baranov, BV, Cailleux, B, Heath, RA, Hühnerbach, V, Hort, M, Kath, T, Masson, D and Schaffer, I (2002) Widespread fluid expulsion along the seafloor of Costa Rica convergent margin. Terra Nova, 14(2). 69-79. doi:10.1046/j.1365-3121.2002.00400.x

Deutscher, NM, Sherlock, V, Mikaloff Fletcher, SE, Griffith, DWT, Notholt, J, Macatangay, R, Connor, BJ, Robinson, J, Shiona, H, Velazco, VA, Wang, Y, Wennberg, PO and Wunch, D (2014) Drivers of column-average CO2 variability at Southern Hemispheric Total Carbon Column Observing Network sites. Atmospheric Chemistry and Physics, 14(18). 9883-9901. doi:10.5194/acp-14-9883-2014

Hayman, GD, O'Connor, FM, Dalvi, M, Clark, DB, Gedney, N, Huntingford, C, Prigent, C, Buchwitz, M, Schneising, O, Burrows, JP, Wilson, C, Richards, N and Chipperfield, M (2014) Comparison of the HadGEM2 climate-chemistry model against in situ and SCIAMACHY atmospheric methane data. Atmospheric Chemistry and Physics, 14(23). 13257-13280. doi:10.5194/acp-14-13257-2014

Hoppstock, L, Trusch, F, Lederer, C, van West, P, Könneke, M and Bayer, P (2016) NmPin from the marine thaumarchaeote Nitrosopumilus maritimus is an active membrane associated prolyl isomerase. BMC Biology, 14(1). doi:10.1186/s12915-016-0274-1

Houweling, S, Krol, M, Bergamaschi, P, Frankenberg, C, Dlugokencky, EJ, Morino, I, Notholt, J, Sherlock, V, Wunch, D, Beck, V, Gerbig, C, Chen, H, Kort, EA, Röckmann, T and Aben, I (2014) A multi-year methane inversion using SCIAMACHY, accounting for systematic errors using TCCON measurements. Atmospheric Chemistry and Physics, 14(8). 3991-4012. doi:10.5194/acp-14-3991-2014

Kleindienst, S, Ramette, A, Amann, R and Knittel, K (2012) Distribution and in situ abundance of sulfate-reducing bacteria in diverse marine hydrocarbon seep sediments. Environmental Microbiology, 14. 2689-2710. doi:10.1111/j.1462-2920.2012.02832.x

Kuhs, WF, Genov, GY, Goreshnik, E, Zeller, A, Techmer, KS and Bohrmann, G (2004) The impact of porous microstructures of gas hydrates on their macroscopic properties. International Journal of Offshore and Polar Engineering, 14(4). 305-309.

Leider, A, Schumacher, TC and Hallmann, C (2016) Enhanced procedural blank control for organic geochemical studies of critical sample material. Geobiology, 14(5). 469-482. doi:10.1111/gbi.12183

Morard, R, Füllberg, A, Brummer, GJA, Greco, M, Jonkers, L, Wizemann, A, Weiner, AKM, Darling, K, Siccha, M, Ledevin, R, Kitazato, H, de Garidel-Thoron, T, de Vargas, C and Kucera, M (2019) Genetic and morphological divergence in the warm-water planktonic foraminifera genus Globigerinoides. PLOS ONE, 14(12). e0225246. doi:10.1371/journal.pone.0225246

Morard, R, Lejzerowicz, F, Darling, KF, Lecroq-Bennet, B, Winther Pedersen, M, Orlando, L, Pawlowski, J, Mulitza, S, de Vargas, C and Kucera, M (2017) Planktonic foraminifera-derived environmental DNA extracted from abyssal sediments preserves patterns of plankton macroecology. Biogeosciences, 14(11). 2741-2754. doi:10.5194/bg-14-2741-2017 PANGAEA Supplementary Data

Morard, R, Vollmar, NM, Greco, M and Kucera, M (2019) Unassigned diversity of planktonic foraminifera from environmental sequencing revealed as known but neglected species. PLOS ONE, 14(3). e0213936. doi:10.1371/journal.pone.0213936

Polerecky, L, Adam, B, Milucka, J, Musat, N, Vagner, T and Kuypers, MMM (2012) Look@NanoSIMS - a tool for the analysis of nanoSIMS data in environmental microbiology. Environmental Microbiology, 14(4). 1009-1023. doi:10.1111/j.1462-2920.2011.02681.x

Reisky, L, Büchsenschütz, HC, Engel, J, Song, T, Schweder, T, Hehemann, JH and Bornscheuer, UT (2018) Oxidative demethylation of algal carbohydrates by cytochrome P450 monooxygenases. Nature Chemical Biology, 14(4). 342-344. doi:10.1038/s41589-018-0005-8

Rybakova, E, Kremenetskaia, A, Vedenin, A, Boetius, A and Gebruk, A (2019) Deep-sea megabenthos communities of the Eurasian Central Arctic are influenced by ice-cover and sea-ice algal falls. PLOS ONE, 14(7). e0211009. doi:10.1371/journal.pone.0211009

Schouten, S, Hopmans, EC, Rosell-Melé, A, Pearson, A, Adam, P, Bauersachs, T, Bard, E, Bernasconi, SM, Bianchi, TS, Brocks, JJ, Carlson, LT, Castañeda, IS, Derenne, S, Selver, AD, Dutta, K, Eglinton, TI, Fosse, C, Galy, V, Grice, K, Hinrichs, KU, Huang, Y, Huguet, A, Huguet, C, Hurley, S, Ingalls, A, Jia, G, Keely, B, Knappy, C, Kondo, M, Krishnan, S, Lincoln, S, Lipp, JS, Mangelsdorf, K, Martinez-Garcia, A, Ménot, G, Mets, A, Mollenhauer, G, Ohkouchi, N, Ossebaar, J, Pagani, M, Pancost, RD, Pearson, EJ, Peterse, F, Reichart, GJ, Schaeffer, P, Schmitt, G, Schwark, L, Shah, SR, Smith, RW, Smittenberg, RH, Summons, RE, Takano, Y, Talbot, HM, Taylor, KWR, Tarozo, R, Uchida, M, van Dongen, BE, Van Mooy, BAS, Wang, J, Warren, C, Weijers, JWH, Werne, JP, Woltering, M, Xie, S, Yamamoto, M, Yang, H, Zhang, CL, Zhang, Y, Zhao, M and Damsté, JSS (2013) An interlaboratory study of TEX86and BIT analysis of sediments, extracts, and standard mixtures. Geochemistry, Geophysics, Geosystems, 14(12). 5263-5285. doi:10.1002/2013GC004904

Stief, P, Fuchs-Ocklenburg, S, Kamp, A, Manohar, CS, Houbraken, J, Boekhout, T, de Beer, D and Stoeck, T (2014) Dissimilatory nitrate reduction by Aspergillus terreus isolated from the seasonal oxygen minimum zone in the Arabian Sea. BMC Microbiology, 14(35). doi:10.1186/1471-2180-14-35

Vieira, S, Sikorski, J, Dietz, S, Herz, K, Schrumpf, M, Bruelheide, H, Scheel, D, Friedrich, MW and Overmann, J (2020) Drivers of the composition of active rhizosphere bacterial communities in temperate grasslands. The ISME Journal, 14(2). 463-475. doi:10.1038/s41396-019-0543-4

Wegener, G, Bausch, M, Holler, T, Thang, NM, Mollar, XP, Kellermann, MY, Hinrichs, KU and Boetius, A (2012) Assessing sub-seafloor microbial activity by combined stable istotope probing with deuterated water and 13C-bicarbonates. Environmental Microbiology, 14(6). 1517-1527. doi:10.1111/j.1462-2920.2012.02739.x

Wollenburg, JE, Iversen, M, Katlein, C, Krumpen, T, Nicolaus, M, Castellani, G, Peeken, I and Flores, H (2020) New observations of the distribution, morphology and dissolution dynamics of cryogenic gypsum in the Arctic Ocean. The Cryosphere, 14(6). 1795-1808. doi:10.5194/tc-14-1795-2020

Yan, J, Haaijer, SCM, Op den Camp, HJM, van Niftrik, L, Stahl, DA, Könneke, M, Rush, D, Sinninghe Damsté, JS, Hu, YY and Jetten, MSM (2012) Mimicking the oxygen minimum zones: stimulating interaction of aerobic archaeal and anaerobic bacterial ammonia oxidizers in a laboratory-scale model system. Environmental Microbiology, 14(12). 3146-3158. doi:10.1111/j.1462-2920.2012.02894.x

139

Zonneveld, KAF, Ebersbach, F, Maeke, M and Versteegh, GJM (2018) Transport of organic-walled dinoflagellate cysts in nepheloid layers off Cape Blanc (N-W Africa). Deep Sea Research Part I: Oceanographic Research Papers, 139. 55-67. doi:10.1016/j.dsr.2018.06.003

138

Iversen, MH, Pakhomov, EA, Hunt, BPV, Van der Jagt, H, Wolf-Gladrow, D and Klaas, C (2017) Sinkers or floaters? Contribution from salp pellets to the export flux during a large bloom event in the Southern Ocean. Deep Sea Research Part II: Topical Studies in Oceanography, 138. 116-125. doi:10.1016/j.dsr2.2016.12.004

Roca-Martí, M, Puigcorbé, V, Iversen, MH, van der Loeff, MR, Klaas, C, Cheah, W, Bracher, A and Masqué, P (2017) High particulate organic carbon export during the decline of a vast diatom bloom in the Atlantic sector of the Southern Ocean. Deep Sea Research Part II: Topical Studies in Oceanography, 138. 102-115. doi:10.1016/j.dsr2.2015.12.007 PANGAEA Supplementary Data

137

Loher, M, Marcon, Y, Pape, T, Römer, M, Wintersteller, P, dos Santos Ferreira, C, Praeg, D, Torres, M, Sahling, H and Bohrmann, G (2018) Seafloor sealing, doming, and collapse associated with gas seeps and authigenic carbonate structures at Venere mud volcano, Central Mediterranean. Deep Sea Research Part I: Oceanographic Research Papers, 137. 76-96. doi:10.1016/j.dsr.2018.04.006 PANGAEA Supplementary Data

Nowald, N, Iversen, MH, Fischer, G, Ratmeyer, V and Wefer, G (2015) Time series of in-situ particle properties and sediment trap fluxes in the coastal upwelling filament off Cape Blanc, Mauritania. Progress in Oceanography, 137. 1-11. doi:10.1016/j.pocean.2014.12.015 PANGAEA Supplementary Data

133

Versteegh, GJM and Lipp, JS (2019) Detection of new long-chain mid-chain keto-ol isomers from marine sediments by means of HPLC–APCI-MS and comparison with long-chain mid-chain diols from the same samples. Organic Geochemistry, 133. 92-102. doi:10.1016/j.orggeochem.2019.04.004

132

Hsu, CW, Marcon, Y, Römer, M, Pape, T, Klaucke, I, Loher, M, Wintersteller, P, MacDonald, IR, dos Santos Ferreira, C and Bohrmann, G (2021) Heterogeneous hydrocarbon seepage at Mictlan asphalt knoll of the southern Gulf of Mexico. Marine and Petroleum Geology, 132. 105185. doi:10.1016/j.marpetgeo.2021.105185

13

Arnosti, C, Wietz, M, Brinkhoff, T, Hehemann, JH, Probandt, D, Zeugner, L and Amann, R (2021) The biogeochemistry of marine olysaccharides: Sources, inventories, and bacterial drivers of the Carbohydrate Cycle. In: Carlson, CA and Giovannoni, SJ (eds.) Annual Review of Marine Science. Annual Reviews, 81-108. doi:10.1146/annurev-marine-032020-012810

Belcher, A, Iversen, MH, Giering, S, Riou, V, Henson, SA, Berline, L, Guilloux, L and Sanders, R (2016) Depth-resolved particle-associated microbial respiration in the northeast Atlantic. Biogeosciences, 13(17). 4927-4943. doi:10.5194/bg-13-4927-2016

Benito Merino, D, Zehnle, H, Teske, A and Wegener, G (2022) Deep-branching ANME-1c archaea grow at the upper temperature limit of anaerobic oxidation of methane. Frontiers in Microbiology, 13. doi:10.3389/fmicb.2022.988871

Beulig, F, Schubert, F, Adhikari, RR, Glombitza, C, Heuer, VB, Hinrichs, KU, Homola, KL, Inagaki, F, Jørgensen, BB, Kallmeyer, J, Krause, SJE, Morono, Y, Sauvage, J, Spivack, AJ and Treude, T (2022) Rapid metabolism fosters microbial survival in the deep, hot subseafloor biosphere. Nature Communications, 13(1). doi:10.1038/s41467-021-27802-7

Blanchet, CL, Kasten, S, Vidal, L, Poulton, SW, Ganeshram, R and Thouveny, N (2012) Influence of diagenesis on the stable isotopic composition of biogenic carbonate from the Gulf of Tehuantepec oxygen minimum zone. Geochemistry Geophysics Geosystems, 13. doi:10.1029/2011GC003800

Boetius, A, Anesio, AM, Deming, JW, Mikucki, JA and Rapp, JZ (2015) Microbial ecology of the cryosphere: sea ice and glacial habitats. Nature Reviews Microbiology, 13(11). 677-690. doi:10.1038/nrmicro3522

Busch, K, Slaby, BM, Bach, W, Boetius, A, Clefsen, I, Colaço, A, Creemers, M, Cristobo, J, Federwisch, L, Franke, A, Gavriilidou, A, Hethke, A, Kenchington, E, Mienis, F, Mills, S, Riesgo, A, Ríos, P, Roberts, EM, Sipkema, D, Pita, L, Schupp, PJ, Xavier, J, Rapp, HT and Hentschel, U (2022) Biodiversity, environmental drivers, and sustainability of the global deep-sea sponge microbiome. Nature Communications, 13(1). doi:10.1038/s41467-022-32684-4

Bussmann, I, Matousu, A, Osudar, R and Mau, S (2015) Assessment of the radio 3H-CH4 tracer technique to measure aerobic methane oxidation in the water column. Limnology and Oceanography: Methods, 13(6). 312-327. doi:10.1002/lom3.10027

Dörgens, AL, Ahmerkamp, S, Müssig, J, Stocker, R, Kuypers, MMM, Khalili, A and Kindler, K (2015) A laboratory model of marine snow: Preparation and characterization of porous fiber particles. Limnology and Oceanography: Methods, 13(11). 664-671. doi:10.1002/lom3.10056

Edwards, KJ, Bach, W and McCollom, TM (2005) Geomicrobiology in oceanography: microbe–mineral interactions at and below the seafloor. Trends in Microbiology, 13(9). 449-456. doi:10.1016/j.tim.2005.07.005

Fischer, G, Karstensen, J, Romero, OE, Baumann, KH, Donner, B, Hefter, J, Mollenhauer, G, Iversen, MH, Fiedler, B, Monteiro, I and Körtzinger, A (2016) Bathypelagic particle flux signatures from a suboxic eddy in the oligotrophic tropical North Atlantic: production, sedimentation and preservation. Biogeosciences, 13(11). 3203-3223. doi:10.5194/bg-13-3203-2016 PANGAEA Supplementary Data

Girnth, AC, Grünke, S, Lichtschlag, A, Felden, J, Knittel, K, Wenzhöfer, F, de Beer, D and Boetius, A (2011) A novel, mat-forming Thiomargarita population associated with a sulfidic fluid flow from a deep-sea mud volcano. Environmental Microbiology, 13(2). 495-505. doi:10.1111/j.1462-2920.2010.02353.x

Hehemann, JH, Reintjes, G, Klassen, L, Smith, AD, Ndeh, D, Arnosti, C, Amann, R and Abbott, DW (2019) Single cell fluorescence imaging of glycan uptake by intestinal bacteria. The ISME Journal, 13(7). 1883-1889. doi:10.1038/s41396-019-0406-z

Hentscher, M and Bach, W (2012) Geochemically induced shifts in catabolic energy yields explain past ecological changes of diffuse vents in the East Pacific Rise 9°50'N area. Geochemical Transactions, 13(2). 11 pp. doi:10.1186/1467-4866-13-2

Hinck, S, Mussmann, M, Salman, V, Neu, TR, Lenk, S, de Beer, D and Jonkers, HM (2011) Vacuolated Beggiatoa-like filaments from different hypersaline environments form a novel genus. Environmental Microbiology, 13(12). 3194-3205. doi:10.1111/j.1462-2920.2011.02513.x

Ionescu, D, Spitzer, S, Reimer, A, Schneider, D, Daniel, R, Reitner, J, de Beer, D and Arp, G (2014) Calcium dynamics in microbialite-forming exopolymer-rich mats on the atoll of Kiritimati, Republic of Kiribati, Central Pacific. Geobiology, 13(2). 170-180. doi:10.1111/gbi.12120

Kappelmann, L, Krüger, K, Hehemann, JH, Harder, J, Markert, S, Unfried, F, Becher, D, Shapiro, N, Schweder, T, Amann, RI and Teeling, H (2019) Polysaccharide utilization loci of North Sea Flavobacteriia as basis for using SusC/D-protein expression for predicting major phytoplankton glycans. The ISME Journal, 13(1). 76-91. doi:10.1038/s41396-018-0242-6

Koch, H, Dürwald, A, Schweder, T, Noriega-Ortega, B, Vidal-Melgosa, S, Hehemann, JH, Dittmar, T, Freese, HM, Becher, D, Simon, M and Wietz, M (2019) Biphasic cellular adaptations and ecological implications of Alteromonas macleodii degrading a mixture of algal polysaccharides. The ISME Journal, 13(1). 92-103. doi:10.1038/s41396-018-0252-4

Ksionzek, KB, Zhang, J, Ludwichowski, KU, Wilhelms-Dick, D, Trimborn, S, Jendrossek, T, Kattner, G and Koch, BP (2018) Stoichiometry, polarity, and organometallics in solid-phase extracted dissolved organic matter of the Elbe-Weser estuary. PLOS ONE, 13(9). e0203260. doi:10.1371/journal.pone.0203260 PANGAEA Supplementary Data

Laso-Pérez, R, Krukenberg, V, Musat, F and Wegener, G (2018) Establishing anaerobic hydrocarbon-degrading enrichment cultures of microorganisms under strictly anoxic conditions. Nature Protocols, 13(6). 1310-1330. doi:10.1038/nprot.2018.030

Lenk, S, Arnds, J, Zerjatke, K, Musat, N, Amann, R and Mussmann, M (2011) Novel groups of Gammaproteobacteria catalyse sulfur oxidation and carbon fixation in a coastal, intertidal sediment. Environmental Microbiology, 13(3). 758-774. doi:10.1111/j.1462-2920.2010.02380.x

Meister, P, Wiedling, J, Lott, C, Bach, W, Kuhfuß, H, Wegener, G, Böttcher, ME, Deusner, C, Lichtschlag, A, Bernasconi, SM and Weber, M (2018) Anaerobic methane oxidation inducing carbonate precipitation at abiogenic methane seeps in the Tuscan archipelago (Italy). PLOS ONE, 13(12). e0207305. doi:10.1371/journal.pone.0207305

Morganti, TM, Slaby, BM, de Kluijver, A, Busch, K, Hentschel, U, Middelburg, JJ, Grotheer, H, Mollenhauer, G, Dannheim, J, Rapp, HT, Purser, A and Boetius, A (2022) Giant sponge grounds of Central Arctic seamounts are associated with extinct seep life. Nature Communications, 13(1). doi:10.1038/s41467-022-28129-7

Müller, D, Warneke, T, Rixen, T, Müller, M, Mujahid, A, Bange, HW and Notholt, J (2016) Fate of terrestrial organic carbon and associated CO2 and CO emissions from two Southeast Asian estuaries. Biogeosciences, 13(3). 691-705. doi:10.5194/bg-13-691-2016

Niemann, H, Steinle, L, Blees, J, Bussmann, I, Treude, T, Krause, S, Elvert, M and Lehmann, MF (2015) Toxic effects of lab-grade butyl rubber stoppers on aerobic methane oxidation. Limnology and Oceanography: Methods, 13. 40-52. doi:10.1002/lom3.10005

Sahling, H, Borowski, C, Escobar-Briones, E, Gaytán-Caballero, A, Hsu, CW, Loher, M, MacDonald, I, Marcon, Y, Pape, T, Römer, M, Rubin-Blum, M, Schubotz, F, Smrzka, D, Wegener, G and Bohrmann, G (2016) Massive asphalt deposits, oil seepage, and gas venting support abundant chemosynthetic communities at the Campeche Knolls, southern Gulf of Mexico. Biogeosciences, 13(15). 4491-4512. doi:10.5194/bg-13-4491-2016 PANGAEA Supplementary Data

Schauer, R, Røy, H, Augustin, N, Gennerich, HH, Peters, M, Wenzhöfer, F, Amann, R and Meyerdierks, A (2011) Bacterial sulfur cycling shapes microbial communities in surface sediments of an ultramafic hydrothermal vent field. Environmental Microbiology, 13(10). 2633-2648. doi:10.1111/j.1462-2920.2011.02530.x PANGAEA Supplementary Data

Schoettner, S, Pfitzner, B, Grünke, S, Rasheed, MY, Wild, C and Ramette, A (2011) Drivers of bacterial diversity dynamics in permeable carbonate and silicate coral reef sands from the Red Sea. Environmental Microbiology, 13(7). 1815-1826. doi:10.1111/j.1462-2920.2011.02494.x

Tourte, M, Coffinet, S, Wörmer, L, Lipp, JS, Hinrichs, KU and Oger, PM (2022) The exploration of the Thermococcus barophilus lipidome reveals the widest variety of phosphoglycolipids in Thermococcales. Frontiers in Microbiology, 13. 869479. doi:10.3389/fmicb.2022.869479

Türke, A, Ménez, B and Bach, W (2018) Comparing biosignatures in aged basalt glass from North Pond, Mid-Atlantic Ridge and the Louisville Seamount Trail, off New Zealand. PLOS ONE, 13(2). e0190053. doi:10.1371/journal.pone.0190053 PANGAEA Supplementary Data

Visnovitz, F, Bodnár, T, Tóth, Z, Spiess, V, Kudó, I, Timár, G and Horváth, F (2015) Seismic expressions of shallow gas in the lacustrine deposits of Lake Balaton, Hungary. Near Surface Geophysics, 13(5). 433-446. doi:10.3997/1873-0604.2015026

Wehrmann, LM, Titschack, J, Böttcher, ME and Ferdelman, TG (2015) Linking sedimentary sulfur and iron biogeochemistry to growth patterns of a cold-water coral mound in the Porcupine Basin, S.W. Ireland (IODP Expedition 307). Geobiology, 13(5). 424-442. doi:10.1111/gbi.12147

Wietz, M, Metfies, K, Bienhold, C, Wolf, C, Janssen, F, Salter, I and Boetius, A (2022) Impact of preservation method and storage period on ribosomal metabarcoding of marine microbes: Implications for remote automated samplings. Frontiers in Microbiology, 13. doi:10.3389/fmicb.2022.999925

Yin, X, Wu, W, Maeke, M, Richter-Heitmann, T, Kulkarni, AC, Oni, OE, Wendt, J, Elvert, M and Friedrich, MW (2019) CO2 conversion to methane and biomass in obligate methylotrophic methanogens in marine sediments. The ISME Journal, 13(8). 2107-2119. doi:10.1038/s41396-019-0425-9

Zhu, QZ, Wegener, G, Hinrichs, KU and Elvert, M (2022) Activity of Ancillary Heterotrophic Community Members in Anaerobic Methane-Oxidizing Cultures. Frontiers in Microbiology, 13. doi:10.3389/fmicb.2022.912299

129

Gollner, S, Kaiser, S, Menzel, L, Jones, DOB, Brown, A, Mestre, NC, van Oevelen, D, Menot, L, Colaço, A, Canals, M, Cuvelier, D, Durden, JM, Gebruk, A, Egho, GA, Haeckel, M, Marcon, Y, Mevenkamp, L, Morato, T, Pham, CK, Purser, A, Sanchez-Vidal, A, Vanreusel, A, Vink, A and Martínez Arbizu, P (2017) Resilience of benthic deep-sea fauna to mining activities. Marine Environmental Research, 129. 76-101. doi:10.1016/j.marenvres.2017.04.010

Leider, A, Richter-Brockmann, S, Nettersheim, BJ, Achten, C and Hallmann, C (2019) Low-femtogram sensitivity analysis of polyaromatic hydrocarbons using GC-APLI-TOF mass spectrometry: Extending the target window for aromatic steroids in early Proterozoic rocks. Organic Geochemistry, 129. 77-87. doi:10.1016/j.orggeochem.2019.01.015

128

Jurado, E, Lohmann, R, Meijer, S, Jones, KC and Dachs, J (2004) Latitudinal and seasonal capacity of the surface Oceans as a reservoir of polychlorinated biphenyls. Environmental Pollution, 128. 149-162. doi:10.1016/j.envpol.2003.08.039

Lü, X, Chen, J, Han, T, Yang, H, Wu, W, Ding, W and Hinrichs, KU (2019) Origin of hydroxyl GDGTs and regular isoprenoid GDGTs in suspended particulate matter of Yangtze River Estuary. Organic Geochemistry, 128. 78-85. doi:10.1016/j.orggeochem.2018.12.010

127

Baloza, M, Henkel, S, Geibert, W, Kasten, S and Holtappels, M (2022) Benthic carbon remineralization and iron cycling in relation to sea ice cover along the eastern continental shelf of the Antarctic Peninsula. Journal of Geophysical Research: Oceans, 127(7). doi:10.1029/2021JC018401

Kamyshny, A, Zerkle, AL, Mansaray, ZF, Ciglenecki, I, Bura-Nakic, E, Farquhar, J and Ferdelman, TG (2011) Biogeochemical sulfur cycling in the water column of a shallow stratified sea-water lake: Specification and quadruple sulfur isotope composition. Marine Chemistry, 127(1-4). 144-154. doi:10.1016/j.marchem.2011.09.001

Oguri, K, Masqué, P, Zabel, M, Stewart, HA, MacKinnon, G, Rowden, AA, Berg, P, Wenzhöfer, F and Glud, RN (2022) Sediment accumulation and carbon burial in four hadal trench systems. Journal of Geophysical Research: Biogeosciences, 127(10). doi:10.1029/2022JG006814

126

Karakuş, O, Völker, C, Iversen, MH, Hagen, W, Wolf‐Gladrow, D, Fach, B and Hauck, J (2021) Modeling the impact of macrozooplankton on carbon export production in the Southern Ocean. Journal of Geophysical Research: Oceans, 126(12). doi:10.1029/2021JC017315

Kusch, S, Rethemeyer, J, Ransby, D and Mollenhauer, G (2021) Permafrost organic carbon turnover and export into a high‐Arctic fjord: A case study from Svalbard using compound‐specific 14 C analysis. Journal of Geophysical Research: Biogeosciences, 126(3). doi:10.1029/2020JG006008

125

Ahrens, J, Beck, M, Marchant, HK, Ahmerkamp, S, Schnetger, B and Brumsack, HJ (2020) Seasonality of organic matter degradation regulates nutrient and metal net fluxes in a high energy sandy beach. Journal of Geophysical Research: Biogeosciences, 125(2). doi:10.1029/2019JG005399

Pape, T, Bünz, S, Hong, WL, Torres, ME, Riedel, M, Panieri, G, Lepland, A, Hsu, CW, Wintersteller, P, Wallmann, K, Schmidt, C, Yao, H and Bohrmann, G (2020) Origin and transformation of light hydrocarbons ascending at an active pockmark on Vestnesa Ridge, Arctic Ocean. Journal of Geophysical Research: Solid Earth, 125(1). doi:10.1029/2018JB016679

Treude, T, Krause, S, Steinle, L, Burwicz, E, Hamdan, LJ, Niemann, H, Feseker, T, Liebetrau, V, Krastel, S and Berndt, C (2020) Biogeochemical consequences of nonvertical methane transport in sediment offshore northwestern Svalbard. Journal of Geophysical Research: Biogeosciences, 125(3). doi:10.1029/2019JG005371

Xu, Y, Wu, W, Xiao, W, Ge, H, Wei, Y, Yin, X, Yao, H, Lipp, JS, Pan, B and Hinrichs, KU (2020) Intact ether lipids in trench sediments related to archaeal community and environmental conditions in the deepest ocean. Journal of Geophysical Research: Biogeosciences, 125(7). doi:10.1029/2019JG005431

124

Flerus, R, Koch, BP, Schmitt-Kopplin, P, Witt, M and Kattner, G (2011) Molecular level investigation of reactions between dissolved organic matter and extraction solvents using FT-ICR MS. Marine Chemistry, 124(1-4). 100-107. doi:10.1016/j.marchem.2010.12.006

Park, E, Hefter, J, Fischer, G and Mollenhauer, G (2018) TEX86 in sinking particles in three eastern Atlantic upwelling regimes. Organic Geochemistry, 124. 151-163. doi:10.1016/j.orggeochem.2018.07.015 PANGAEA Supplementary Data

122

Pape, T, Haeckel, M, Riedel, M, Kölling, M, Schmidt, M, Wallmann, K and Bohrmann, G (2020) Formation pathways of light hydrocarbons in deep sediments of the Danube deep-sea fan, Western Black Sea. Marine and Petroleum Geology, 122. 104627. doi:10.1016/j.marpetgeo.2020.104627

121

Dumke, I, Burwicz, EB, Berndt, C, Klaeschen, D, Feseker, T, Geissler, WH and Sarkar, S (2016) Gas hydrate distribution and hydrocarbon maturation north of the Knipovich Ridge, western Svalbard margin. Journal of Geophysical Research: Solid Earth, 121(3). 1405-1424. doi:10.1002/2015JB012083 PANGAEA Supplementary Data

Kamyshny, A and Ferdelman, TG (2010) Dynamics of zero-valent sulfur species including polysulfides at seep sites on intertidal sand flats (Wadden Sea, North Sea). Marine Chemistry, 121(1-4). 17-26. doi:10.1016/j.marchem.2010.03.001

Sokoll, S, Lavik, G, Sommer, S, Goldhammer, T, Kuypers, MMM and Holtappels, M (2016) Extensive nitrogen loss from permeable sediments off North-West Africa. Journal of Geophysical Research: Biogeosciences, 121(4). 1144-1157. doi:10.1002/2015JG003298

Wu, W, Meador, T and Hinrichs, KU (2018) Production and turnover of microbial organic matter in surface intertidal sediments. Organic Geochemistry, 121. 104-113. doi:10.1016/j.orggeochem.2018.04.006

120

Ahmerkamp, S, Winter, C, Janssen, F, Kuypers, MMM and Holtappels, M (2015) The impact of bedform migration on benthic oxygen fluxes. Journal of Geophysical Research: Biogeosciences, 120(11). 2229-2242. doi:10.1002/2015JG003106

Kurganskaya, I and Lüttge, A (2016) Kinetic Monte Carlo approach to study carbonate dissolution. The Journal of Physical Chemistry C, 120(12). 6482-6492. doi:10.1021/acs.jpcc.5b10995

Kurganskaya, I and Lüttge, A (2013) A comprehensive stochastic model of phyllosilicate dissolution: Structure and kinematics of etch pits formed on muscovite basal face. Geochimica et Cosmochimica Acta, 120. 545-560. doi:10.1016/j.gca.2013.06.038

Müller, IA, Brunner, B, Breuer, C, Coleman, M and Bach, W (2013) The oxygen isotope equilibrium fractionation between sulfite species and water. Geochimica et Cosmochimica Acta, 120. 562-581. doi:10.1016/j.gca.2013.06.037

Tóth, Z, Spiess, V and Keil, H (2015) Frequency dependence in seismoacoustic imaging of shallow free gas due to gas bubble resonance. Journal of Geophysical Research: Solid Earth, 120(12). 8056-8072. doi:10.1002/2015JB012523

12

Arandia-Gorostidi, N, Berthelot, H, Calabrese, F, Stryhanyuk, H, Klawonn, I, Iversen, MH, Nahar, N, Grossart, HP, Ploug, H and Musat, N (2022) Efficient carbon and nitrogen transfer from marine diatom aggregates to colonizing bacterial groups. Scientific Reports, 12(1). doi:10.1038/s41598-022-18915-0

Borin, S, Ventura, S, Tambone, F, Mapelli, F, Schubotz, F, Brusetti, L, Scaglia, B, D'Acqui, L, Solheim, B, Turicchia, S, Marasco, R, Hinrichs, KU, Baldi, F, Adani, F and Daffonchio, D (2010) Rock weathering creates oases of life in a High Arctic desert. Environmental Microbiology, 12(2). 293-303. doi:10.1111/j.1462-2920.2009.02059.x

Cardozo-Mino, MG, Fadeev, E, Salman-Carvalho, V and Boetius, A (2021) Spatial distribution of Arctic Bacterioplankton abundance is linked to distinct water masses and summertime phytoplankton bloom dynamics (Fram Strait, 79°N). Frontiers in Microbiology, 12. doi:10.3389/fmicb.2021.658803

Carr, SA, Schubotz, F, Dunbar, RB, Mills, CT, Dias, R, Summons, RE and Mandernack, KW (2018) Acetoclastic Methanosaeta are dominant methanogens in organic-rich Antarctic marine sediments. The ISME Journal, 12(2). 330-342. doi:10.1038/ismej.2017.150

Engelen, B, Nguyen, T, Heyerhoff, B, Kalenborn, S, Sydow, K, Tabai, H, Peterson, RN, Wegener, G and Teske, A (2021) Microbial communities of hydrothermal Guaymas Basin surficial sediment profiled at 2 millimeter-scale resolution. Frontiers in Microbiology, 12. doi:10.3389/fmicb.2021.710881

Fadeev, E, Cardozo-Mino, MG, Rapp, JZ, Bienhold, C, Salter, I, Salman-Carvalho, V, Molari, M, Tegetmeyer, HE, Buttigieg, PL and Boetius, A (2021) Comparison of Two 16S rRNA Primers (V3–V4 and V4–V5) for Studies of Arctic Microbial Communities. Frontiers in Microbiology, 12. doi:10.3389/fmicb.2021.637526

Felden, J, Ruff, SE, Ertefai, T, Inagaki, F, Hinrichs, KU and Wenzhöfer, F (2014) Anaerobic methanotrophic community of a 5346-m-deep vesicomyid clam colony in the Japan Trench. Geobiology, 12(3). 183-199. doi:10.1111/gbi.12078 PANGAEA Supplementary Data

Fernández-Méndez, M, Katlein, C, Rabe, B, Nicolaus, M, Peeken, I, Bakker, K, Flores, H and Boetius, A (2015) Photosynthetic production in the central Arctic Ocean during the record sea-ice minimum in 2012. Biogeosciences, 12(11). 3525-3549. doi:10.5194/bg-12-3525-2015 PANGAEA Supplementary Data

Hubert, C, Arnosti, C, Brüchert, V, Loy, A, Vandieken, V and Jørgensen, BB (2010) Thermophilic anaerobes in Arctic marine sediments induced to mineralize complex organic matter at high temperature. Environmental Microbiology, 12(4). 1089-1104. doi:10.1111/j.1462-2920.2010.02161.x

Jogler, C, Niebler, M, Lin, W, Kube, M, Wanner, G, Kolinko, S, Stief, P, Beck, AJ, de Beer, D, Petersen, N, Pan, Y, Amann, R, Reinhardt, R and Schüller, D (2010) Cultivation-independent characterization of 'Candidatus Magnetobacterium bavaricum' via ultrastructural, goechemical, ecological and metagenomic methods. Environmental Microbiology, 12(9). 2466-2478. doi:10.1111/j.1462-2920.2010.02220.x

Karstensen, J, Fiedler, B, Schütte, F, Brandt, P, Körtzinger, A, Fischer, G, Zantopp, R, Hahn, J, Visbeck, M and Wallace, D (2015) Open ocean dead zones in the tropical North Atlantic Ocean. Biogeosciences, 12(8). 2597-2605. doi:10.5194/bg-12-2597-2015

Karthäuser, C, Ahmerkamp, S, Marchant, HK, Bristow, LA, Hauss, H, Iversen, MH, Kiko, R, Maerz, J, Lavik, G and Kuypers, MMM (2021) Small sinking particles control anammox rates in the Peruvian oxygen minimum zone. Nature Communications, 12(1). doi:10.1038/s41467-021-23340-4

Klevenz, V, Bach, W, Schmidt, K, Hentscher, M, Koschinsky, A and Petersen, S (2011) Geochemistry of vent fluid particles formed during initial hydrothermal fluid-seawater mixing along the Mid-Atlantic Ridge. Geochemistry Geophysics Geosystems, 12. Q0AE05. doi:10.1029/2011GC003704 PANGAEA Supplementary Data

Kurganskaya, I, Trofimov, N and Lüttge, A (2022) A kinetic Monte Carlo Approach to model barite dissolution: the role of reactive site geometry. Minerals, 12(5). 639. doi:10.3390/min12050639

Kyrpides, NC, Hugenholtz, P, Eisen, JA, Woyke, T, Göker, M, Parker, CT, Amann, R, Beck, BJ, Chain, PSG, Chun, J, Colwell, RR, Danchin, A, Dawyndt, P, Dedeurwaerdere, T, DeLong, EF, Detter, JC, De Vos, P, Donohue, TJ, Dong, XZ, Ehrlich, DS, Fraser, C, Gibbs, R, Gilbert, J, Gilna, P, Glöckner, FO, Jansson, JK, Keasling, JD, Knight, R, Labeda, D, Lapidus, A, Lee, JS, Li, WJ, MA, J, Markowitz, V, Moore, ERB, Morrison, M, Meyer, F, Nelson, KE, Ohkuma, M, Ouzounis, CA, Pace, N, Parkhill, J, Qin, N, Rosselló-Móra, R, Sikorski, J, Smith, D, Sogin, M, Stevens, R, Stingl, U, Suzuki, K, Taylor, D, Tiedje, JM, Tindall, B, Wagner, M, Weinstock, G, Weissenbach, J, White, O, Wang, J, Zhang, L, Zhou, YG, Field, D, Whitman, WB, Garrity, GM and Klenk, HP (2014) Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains. PLoS Biology, 12(8). e1001920. doi:10.1371/journal.pbio.1001920

Lichtschlag, A, Donis, D, Janssen, F, Jessen, GL, Holtappels, M, Wenzhöfer, F, Mazlumyan, S, Sergeeva, N, Waldmann, C and Boetius, A (2015) Effects of fluctuating hypoxia on benthic oxygen consumption in the Black Sea (Crimean shelf). Biogeosciences, 12(16). 5075-5092. doi:10.5194/bg-12-5075-2015 PANGAEA Supplementary Data

Moraru, C, Lam, P, Fuchs, BM, Kuypers, MMM and Amann, R (2010) GeneFISH - an in situ technique for linking gene presence and cell identity in environmental microorganisms. Environmental Microbiology, 12(11). 3057-3073. doi:10.1111/j.1462-2920.2010.02281.x

Pape, T, Feseker, T, Kasten, S, Fischer, D and Bohrmann, G (2011) Distribution and abundance of gas hydrates in near-surface deposits of the Håkon Mosby Mud Volcano, SW Barents Sea. Geochemistry Geophysics Geosystems, 12(9). Q09009, 21 PP.. doi:10.1029/2011GC003575 PANGAEA Supplementary Data

Pauli, NC, Flintrop, CM, Konrad, C, Pakhomov, EA, Swoboda, S, Koch, F, Wang, XL, Zhang, JC, Brierley, AS, Bernasconi, M, Meyer, B and Iversen, MH (2021) Krill and salp faecal pellets contribute equally to the carbon flux at the Antarctic Peninsula. Nature Communications, 12(1). doi:10.1038/s41467-021-27436-9

Petersen, JM, Ramette, A, Lott, C, Cambon-Bonavita, MA, Zbinden, M and Dubilier, N (2010) Dual symbiosis of the vent shrimp Rimicaris exoculata with filamentous gamma- and epsilonproteobacteria at four Mid-Atlantic Ridge hydrothermal vent fields. Environmental Microbiology, 12(8). 2204-2218. doi:10.1111/j.1462-2920.2009.02129.x

Riedinger, N, Formolo, MJ, Lyons, TW, Henkel, S, Beck, A and Kasten, S (2014) An inorganic geochemical argument for coupled anaerobic oxidation of methane and iron reduction in marine sediments. Geobiology, 12(2). 172-181. doi:10.1111/gbi.12077 PANGAEA Supplementary Data

Ruehland, C and Dubilier, N (2010) Gamma- and epsilonproteobacterial ectosymbionts of a shallow-water marine worm are related to deep-sea hydrothermal vent ectosymbionts. Environmental Microbiology Reports, 12. 2312-2326. doi:10.1111/j.1462-2920.2010.02256.x

Schnakenberg, A, Aromokeye, DA, Kulkarni, A, Maier, L, Wunder, LC, Richter-Heitmann, T, Pape, T, Ristova, PP, Bühring, SI, Dohrmann, I, Bohrmann, G, Kasten, S and Friedrich, MW (2021) Electron acceptor availability shapes Anaerobically Methane Oxidizing Archaea (ANME) communities in South Georgia sediments. Frontiers in Microbiology, 12. doi:10.3389/fmicb.2021.617280

Schreiber, L, Holler, L, Knittel, K, Meyerdierks, A and Amann, R (2010) Identification of the dominant sulfate-reducing bacterial partner of anaerobic methanotrophs of the ANME-2 clade. Environmental Microbiology, 12(8). 2327-2340. doi:10.1111/j.1462-2920.2010.02275.x PANGAEA Supplementary Data

Teske, A, Wegener, G, Chanton, JP, White, D, MacGregor, B, Hoer, D, de Beer, D, Zhuang, G, Saxton, MA, Joye, SB, Lizarralde, D, Soule, SA and Ruff, SE (2021) Microbial communities under distinct thermal and geochemical regimes in Axial and Off-Axis sediments of Guaymas Basin. Frontiers in Microbiology, 12. doi:10.3389/fmicb.2021.633649

Unfried, F, Becker, S, Robb, CS, Hehemann, JH, Markert, S, Heiden, SE, Hinzke, T, Becher, D, Reintjes, G, Krüger, K, Avci, B, Kappelmann, L, Hahnke, RL, Fischer, T, Harder, J, Teeling, H, Fuchs, B, Barbeyron, T, Amann, RI and Schweder, T (2018) Adaptive mechanisms that provide competitive advantages to marine bacteroidetes during microalgal blooms. The ISME Journal, 12(12). 2894-2906. doi:10.1038/s41396-018-0243-5

Verna, C, Ramette, A, Wiklund, H, Dahlgren, TG, Glover, AG, Gaill, F and Dubilier, N (2010) High symbiont diversity in the bone-eating worm Osedax mucofloris from shallow whale-falls in the North Atlantic. Environmental Microbiology, 12(8). 2355-2370. doi:10.1111/j.1462-2920.2010.02299.x

Vidal-Melgosa, S, Sichert, A, Francis, TB, Bartosik, D, Niggemann, J, Wichels, A, Willats, WGT, Fuchs, BM, Teeling, H, Becher, D, Schweder, T, Amann, R and Hehemann, JH (2021) Diatom fucan polysaccharide precipitates carbon during algal blooms. Nature Communications, 12(1). doi:10.1038/s41467-021-21009-6

Winterfeld, M, Goñi, MA, Just, J, Hefter, J and Mollenhauer, G (2015) Characterization of particulate organic matter in the Lena River delta and adjacent nearshore zone, NE Siberia – Part 2: Lignin-derived phenol compositions. Biogeosciences, 12(7). 2261-2283. doi:10.5194/bg-12-2261-2015

Winterfeld, M, Laepple, T and Mollenhauer, G (2015) Characterization of particulate organic matter in the Lena River delta and adjacent nearshore zone, NE Siberia - Part I: Radiocarbon inventories. Biogeosciences, 12(12). 3769-3788. doi:10.5194/bg-12-3769-2015 PANGAEA Supplementary Data

Wu, W, Meador, TB, Könneke, M, Elvert, M, Wegener, G and Hinrichs, KU (2020) Substrate‐dependent incorporation of carbon and hydrogen for lipid biosynthesis by Methanosarcina barkeri. Environmental Microbiology Reports, 12(5). 555-567. doi:10.1111/1758-2229.12876

Zhu, C, Wagner, T, Pan, JM and Pancost, RD (2011) Multiple sources and extensive degradation of terrestrial sedimentary organic matter across an energetic, wide continental shelf. Geochemistry Geophysics Geosystems, 12. doi:10.1029/2011GC003506

Zielinski, F, Gennerich, HH, Borowski, C, Wenzhöfer, F and Dubilier, N (2011) In situ measurements of hydrogen sulfide, oxygen, and temperature in diffuse fluids of an ultramafic-hosted hydrothermal vent field (Logatchev, 14°45'N, Mid-Atlantic Ridge): Implications for chemosymbiotic bathymodiolin mussels. Geochemistry Geophysics Geosystems, 12. Q0AE04. doi:10.1029/2011GC003632 PANGAEA Supplementary Data

von Appen, WJ, Waite, AM, Bergmann, M, Bienhold, C, Boebel, O, Bracher, A, Cisewski, B, Hagemann, J, Hoppema, M, Iversen, MH, Konrad, C, Krumpen, T, Lochthofen, N, Metfies, K, Niehoff, B, Nöthig, EM, Purser, A, Salter, I, Schaber, M, Scholz, D, Soltwedel, T, Torres-Valdes, S, Wekerle, C, Wenzhöfer, F, Wietz, M and Boetius, A (2021) Sea-ice derived meltwater stratification slows the biological carbon pump: results from continuous observations. Nature Communications, 12(1). doi:10.1038/s41467-021-26943-z

119

Sultan, N, Bohrmann, G, Ruffine, L, Pape, T, Riboulot, V, Colliat, JL, De Prunelé, A, Dennielou, B, Garziglia, S, Himmler, T, Marsset, T, Peters, CA, Rabiu, A and Wei, J (2014) Pockmark formation and evolution in deep water Nigeria: Rapid hydrate growth versus slow hydrate dissolution. Journal of Geophysical Research: Solid Earth, 119. doi:10.1002/2013JB010546

118

Holtappels, M, Glud, RN, Donis, D, Liu, B, Hume, A, Wenzhöfer, F and Kuypers, MMM (2013) Effects of transient bottom water currents and oxygen concentrations on benthic exchange rates as assessed by eddy correlation measurements. Journal of Geophysical Research: Oceans, 118(3). 1157-1169. doi:10.1002/jgrc.20112

Kieft, TL, Walters, CC, Higgins, MB, Mennito, AS, Clewett, CFM, Heuer, VB, Pullin, MJ, Hendrickson, S, van Heerden, E, Sherwood Lollar, B, Lau, MCY and Onstott, TC (2018) Dissolved organic matter compositions in 0.6–3.4 km deep fracture waters, Kaapvaal Craton, South Africa. Organic Geochemistry, 118. 116-131. doi:10.1016/j.orggeochem.2018.02.003

McCollom, TM, Robbins, M, Moskowitz, B, Berquó, TS, Jöns, N and Hynek, BM (2013) Experimental study of acid-sulfate alteration of basalt and implications for sulfate deposits on Mars. Journal of Geophysical Research: Planets, 118(4). 577-614. doi:10.1002/jgre.20044 PANGAEA Supplementary Data

Peters, CA, Hallmann, C and George, SC (2018) Phenolic compounds in oil-bearing fluid inclusions: implications for water-washing and oil migration. Organic Geochemistry, 118. 36-46. doi:10.1016/j.orggeochem.2018.02.001

Riedinger, N, Scholz, F, Abshire, ML and Zabel, M (2021) Persistent deep water anoxia in the eastern South Atlantic during the last ice age. Proceedings of the National Academy of Sciences, 118(49). e2107034118. doi:10.1073/pnas.2107034118

Schmidt, F, Hinrichs, KU and Elvert, M (2010) Sources, transport, and partitioning of organic matter at a highly dynamic continental margin. Marine Chemistry, 118(1-2). 37-55. doi:10.1016/j.marchem.2009.10.003 PANGAEA Supplementary Data

Song, M, Schubotz, F, Kellermann, MY, Hansen, CT, Bach, W, Teske, AP and Hinrichs, KU (2021) Formation of ethane and propane via abiotic reductive conversion of acetic acid in hydrothermal sediments. Proceedings of the National Academy of Sciences, 118(47). e2005219118. doi:10.1073/pnas.2005219118

Zhu, R, Versteegh, GJM and Hinrichs, KU (2016) Detection of microbial biomass in subseafloor sediment by pyrolysis–GC/MS. Journal of Analytical and Applied Pyrolysis, 118. 175-180. doi:10.1016/j.jaap.2016.02.002

117

Becker, S, Tebben, J, Coffinet, S, Wiltshire, KH, Iversen, MH, Harder, T, Hinrichs, KU and Hehemann, JH (2020) Laminarin is a major molecule in the marine carbon cycle. Proceedings of the National Academy of Sciences, 117(12). 6599-6607. doi:10.1073/pnas.1917001117

Eickmann, B, Bach, W and Peckmann, JL (2009) Authigenesis of carbonate minerals in modern and Devonian ocean-floor hard rocks. Journal of Geology, 117. 307-323. doi:10.1086/597362 PANGAEA Supplementary Data

Hoshino, T, Doi, H, Uramoto, GI, Wörmer, L, Adhikari, RR, Xiao, N, Morono, Y, D’Hondt, S, Hinrichs, KU and Inagaki, F (2020) Global diversity of microbial communities in marine sediment. Proceedings of the National Academy of Sciences, 117(44). 27587-27597. doi:10.1073/pnas.1919139117

Leider, A, Hinrichs, KU, Schefuß, E and Versteegh, GJM (2013) Distribution and stable isotopes of plant wax derived n-alkanes in lacustrine, fluvial and marine surface sediments along an Eastern Italian transect and their potential to reconstruct the hydrological cycle. Geochimica et Cosmochimica Acta, 117. 16-32. doi:10.1016/j.gca.2013.04.018 PANGAEA Supplementary Data

Price, RE, Breuer, C, Reeves, E, Bach, W and Pichler, T (2016) Arsenic bioaccumulation and biotransformation in deep-sea hydrothermal vent organisms from the PACMANUS hydrothermal field, Manus Basin, PNG. Deep Sea Research Part I: Oceanographic Research Papers, 117. 95-106. doi:10.1016/j.dsr.2016.08.012

Reysenbach, AL, St. John, E, Meneghin, J, Flores, GE, Podar, M, Dombrowski, N, Spang, A, L’Haridon, S, Humphris, SE, de Ronde, CEJ, Caratori Tontini, F, Tivey, M, Stucker, VK, Stewart, LC, Diehl, A and Bach, W (2020) Complex subsurface hydrothermal fluid mixing at a submarine arc volcano supports distinct and highly diverse microbial communities. Proceedings of the National Academy of Sciences, 117(51). 32627-32638. doi:10.1073/pnas.2019021117

Römer, M, Sahling, H, Pape, T, Spieß, V and Bohrmann, G (2012) Quantification of gas bubble emissions from submarine hydrocarbon seeps at the Makran continental margin (offshore Pakistan). Journal of Geophysical Research-Oceans, 117. C10015. doi:10.1029/2011JC007424 PANGAEA Supplementary Data

116

Hurley, SJ, Lipp, JS, Close, HG, Hinrichs, KU and Pearson, A (2018) Distribution and export of isoprenoid tetraether lipids in suspended particulate matter from the water column of the Western Atlantic Ocean. Organic Geochemistry, 116. 90-102. doi:10.1016/j.orggeochem.2017.11.010 PANGAEA Supplementary Data

115

Ding, F, Spieß, V, Fekete, N, Murton, BJ, Brüning, M and Bohrmann, G (2010) Interaction between accretionary thrust faulting and slope sedimentation at the frontal Makran accretionary prism and its implications for hydrocarbon fluid seepage. Journal of Geophysical Research-Solid Earth, 115. B08106. doi:10.1029/2008JB006246

Fischer, C and Lüttge, A (2018) Pulsating dissolution of crystalline matter. Proceedings of the National Academy of Sciences, 115(5). 897-902. doi:10.1073/pnas.1711254115

Liu, XL, Lipp, JS, Birgel, D, Summons, RE and Hinrichs, KU (2018) Predominance of parallel glycerol arrangement in archaeal tetraethers from marine sediments: Structural features revealed from degradation products. Organic Geochemistry, 115. 12-23. doi:10.1016/j.orggeochem.2017.09.009

Yu, T, Wu, W, Liang, W, Lever, MA, Hinrichs, KU and Wang, F (2018) Growth of sedimentary Bathyarchaeotaon lignin as an energy source. Proceedings of the National Academy of Sciences, 115(23). 6022-6027. doi:10.1073/pnas.1718854115

113

Bartetzko, A and Fisher, AT (2008) Physical properties of young (3.5 Ma) oceanic crust from the eastern flank of the Juan de Fuca Ridge: Comparison of wireline and core measurements with global data. Journal of Geophysical Research-Solid Earth, 113. B05105. doi:10.1029/2007JB005268

Ding, F, Spieß, V, Brüning, M, Fekete, N, Keil, H and Bohrmann, G (2008) A conceptual model for hydrocarbon accumulation and seepage processes around Chapopote asphalt site, Southern Gulf of Mexico: from high resolution seismic point of view. Journal of Geophysical Research-Solid Earth, 113. B08404. doi:10.1029/2007JB005484

Hobbs, JK, Lee, SM, Robb, M, Hof, F, Barr, C, Abe, KT, Hehemann, JH, McLean, R, Abbott, DW and Boraston, AB (2016) KdgF, the missing link in the microbial metabolism of uronate sugars from pectin and alginate. Proceedings of the National Academy of Sciences, 113(22). 6188-6193. doi:10.1073/pnas.1524214113

LaRowe, DE, Koch, BP, Robador, A, Witt, M, Ksionzek, K and Amend, JP (2017) Identification of organic compounds in ocean basement fluids. Organic Geochemistry, 113. 124-127. doi:10.1016/j.orggeochem.2017.07.017

112

Bach, W and Klein, F (2009) The petrology of seafloor rodingites: Insights from geochemical reaction path modeling. Lithos, 112(1-2). 103-117. doi:10.1016/j.lithos.2008.10.022

Cianca, A, Helmke, P, Mouriño, B, Rueda, MJ, Llinás, O and Neuer, S (2007) Decadal analysis of hydrography and in situ nutrient budgets in the western and eastern North Atlantic subtropical gyre. Journal of Geophysical Research, 112(C7). doi:10.1029/2006JC003788

Klein, F, Humphris, SE, Guo, W, Schubotz, F, Schwarzenbach, EM and Orsi, WD (2015) Fluid mixing and the deep biosphere of a fossil Lost City-type hydrothermal system at the Iberia Margin. Proceedings of the National Academy of Sciences, 112(39). 12036-12041. doi:10.1073/pnas.1504674112

Ruff, SE, Biddle, JF, Teske, AP, Knittel, K, Boetius, A and Ramette, A (2015) Global dispersion and local diversification of the methane seep microbiome. Proceedings of the National Academy of Sciences, 112(13). 4015-4020. doi:10.1073/pnas.1421865112

Tsang, MY, Bowden, SA, Wang, Z, Mohammed, A, Tonai, S, Muirhead, D, Yang, K, Yamamoto, Y, Kamiya, N, Okutsu, N, Hirose, T, Kars, M, Schubotz, F, Ijiri, A, Yamada, Y, Kubo, Y, Morono, Y, Inagaki, F, Heuer, VB and Hinrichs, KU (2020) Hot fluids, burial metamorphism and thermal histories in the underthrust sediments at IODP 370 site C0023, Nankai Accretionary Complex. Marine and Petroleum Geology, 112. 104080. doi:10.1016/j.marpetgeo.2019.104080

111

Dillon, M and Bleil, U (2006) Rock magnetic signatures in diagenetically altered sediments from the Niger deep-sea fan. Journal of Geophysical Research-Solid Earth, 111. B03105. doi:10.1029/2004JB003540 PANGAEA Supplementary Data

Durán-Toro, V, Rezwan, K, Bühring, SI and Maas, M (2022) Arsenic and sulfur nanoparticle synthesis mimicking environmental conditions of submarine shallow-water hydrothermal vents. Journal of Environmental Sciences, 111. 301-312. doi:10.1016/j.jes.2021.04.011

Evans, TW, Wörmer, L, Lever, MA, Lipp, JS, Lagostina, L, Lin, YS, Jørgensen, BB and Hinrichs, KU (2017) Size and composition of subseafloor microbial community in the Benguela upwelling area examined from intact membrane lipid and DNA analysis. Organic Geochemistry, 111. 86-100. doi:10.1016/j.orggeochem.2017.06.008

Könneke, M, Schubert, D, Brown, PC, Hügler, M, Standfest, S, Schwander, T, Schada von Borzyskowski, L, Erb, TJ, Stahl, DA and Berg, IA (2014) Ammonia-oxidizing archaea use the most energy-efficient aerobic pathway for CO2 fixation. Proceedings of the National Academy of Sciences, 111(22). 8239-8244. doi:10.1073/pnas.1402028111

Pichler, T, Price, R, Lazareva, O and Dippold, A (2011) Determination of arsenic concentration and distribution in the Floridan Aquifer System. Journal of Geochemical Exploration, 111(3). 84-96 SI. doi:10.1016/j.gexplo.2011.02.004

Reeves, EP, McDermott, JM and Seewald, JS (2014) The origin of methanethiol in midocean ridge hydrothermal fluids. Proceedings of the National Academy of Sciences, 111(15). 5474-5479. doi:10.1073/pnas.1400643111

Wörmer, L, Elvert, M, Fuchser, J, Lipp, JS, Buttigieg, PL, Zabel, M and Hinrichs, KU (2014) Ultra-high-resolution paleoenvironmental records via direct laser-based analysis of lipid biomarkers in sediment core samples. Proceedings of the National Academy of Sciences of the United States of America, 111(44). 15669-15674. doi:10.1073/pnas.1405237111 PANGAEA Supplementary Data

Zühlsdorff, L and Spieß, V (2006) Sedimentation patterns, folding, and fluid upflow above a burried basement ridge: Results from 2-D and 3-D seismic surveys at the eastern Juan de Fuca Ridge flank. Geophysical Research Letters, 111. B08103. doi:10.1029/2004JB003227

110

Assmy, P, Smetacek, V, Montresor, M, Klaas, C, Henjes, J, Strass, VH, Arrieta, JM, Bathmann, U, Berg, GM, Breitbarth, E, Cisewski, B, Friedrichs, L, Fuchs, N, Herndl, GJ, Jansen, S, Krägefsky, S, Latasa, M, Peeken, I, Röttgers, R, Scharek, R, Schuller, SE, Steigenberger, S, Webb, A and Wolf-Gladrow, D (2013) Thick-shelled, grazer-protected diatoms decouple ocean carbon and silicon cycles in the iron-limited Antarctic Circumpolar Current. Proceedings of the National Academy of Sciences, 110(51). 20633-20638. doi:10.1073/pnas.1309345110

Barnes, JD, Paulick, H, Sharp, ZD, Bach, W and Beaudoin, G (2009) Stable isotope (d18 O, dD, d37 Cl) evidence for multiple fluid histories in mid-Atlantic abyssal peridotites (ODP Leg 209). Lithos, 110(1-4). 83-94. doi:10.1016/j.lithos.2008.12.004 PANGAEA Supplementary Data

Brunner, B, Contreras, S, Lehmann, MF, Matantseva, O, Rollog, M, Kalvelage, T, Klockgether, G, Lavik, G, Jetten, MSM, Kartal, B and Kuypers, MMM (2013) Nitrogen isotope effects induced by anammox bacteria. Proceedings of the National Academy of Sciences, 110(47). 18994-18999. doi:10.1073/pnas.1310488110

McFall-Ngai, M, Hadfield, MG, Bosch, TCG, Carey, HV, Domazet-Loso, T, Douglas, AE, Dubilier, N, Eberl, G, Fukami, T, Gilbert, SF, Hentschel, U, King, N, Kjelleberg, S, Knoll, AH, Kremer, N, Mazmanian, SK, Metcalf, JL, Nealson, K, Pierce, NE, Rawls, JF, Reid, A, Ruby, EG, Rumpho, M, Sanders, JG, Tautz, D and Wernegreen, JJ (2013) Animals in a bacterial world, a new imperative for the life sciences. Proceedings of the National Academy of Sciences of the United States of America, 110(9). 3229-3236. doi:10.1073/pnas.1218525110

Owens, JD, Gill, BC, Jenkyns, HC, Bates, SM, Severmann, S, Kuypers, MMM, Woodfine, RG and Lyons, TW (2013) Sulfur isotopes track the global extent and dynamics of euxinia during Cretaceous Oceanic Anoxic Event 2. Proceedings of the National Academy of Sciences, 110(46). 18407-18412. doi:10.1073/pnas.1305304110

Sen, A, Ondréas, H, Gaillot, A, Marcon, Y, Augustin, JM and Olu, K (2016) The use of multibeam backscatter and bathymetry as a means of identifying faunal assemblages in a deep-sea cold seep. Deep Sea Research Part I: Oceanographic Research Papers, 110. 33-49. doi:10.1016/j.dsr.2016.01.005

Xie, S, Lipp, JS, Wegener, G, Ferdelman, TG and Hinrichs, KU (2013) Turnover of microbial lipids in the deep biosphere and growth of benthic archaeal populations. PNAS, 110(15). 6010-6014. doi:10.1073/pnas.1218569110 PANGAEA Supplementary Data

11

Bienhold, C, Zinger, L, Boetius, A and Ramette, A (2016) Diversity and biogeography of bathyal and abyssal weafloor bacteria. PLOS ONE, 11(1). e0148016. doi:10.1371/journal.pone.0148016

Bosak, T, Schubotz, F, de Santiago-Torio, A, Kuehl, JV, Carlson, HK, Watson, N, Daye, M, Summons, RE, Arkin, AP and Deutschbauer, AM (2016) System-wide adaptations of Desulfovibrio alaskensis G20 to phosphate-limited conditions. PLOS ONE, 11(12). e0168719. doi:10.1371/journal.pone.0168719

Boyer, GM, Schubotz, F, Summons, RE, Woods, J and Shock, EL (2020) Carbon oxidation state in microbial polar lipids suggests adaptation to hot spring temperature and redox gradients. Frontiers in Microbiology, 11. doi:10.3389/fmicb.2020.00229

Canion, A, Kostka, JE, Gihring, TM, Huettel, M, van Beusekom, JEE, Gao, H, Lavik, G and Kuypers, MMM (2014) Temperature response of denitrification and anammox reveals the adaptation of microbial communities to in situ temperatures in permeable marine sediments that span 50° in latitude. Biogeosciences, 11(2). 309-320. doi:10.5194/bg-11-309-2014

Chennu, A, Färber, P, Volkenborn, N, Al-Najjar, MAA, Janssen, F, de Beer, D and Polerecky, L (2013) Hyperspectral imaging of the microscale distribution and dynamics of microphytobenthos in intertidal sediments. Limnology and Oceanography: Methods, 11. 511-528. doi:10.4319/lom.2013.11.511

Coppola, AI, Wiedemeier, DB, Galy, V, Haghipour, N, Hanke, UM, Nascimento, GS, Usman, M, Blattmann, TM, Reisser, M, Freymond, CV, Zhao, M, Voss, B, Wacker, L, Schefuß, E, Peucker-Ehrenbrink, B, Abiven, S, Schmidt, MWI and Eglinton, TI (2018) Global-scale evidence for the refractory nature of riverine black carbon. Nature Geoscience, 11(8). 584-588. doi:10.1038/s41561-018-0159-8 PANGAEA Supplementary Data

Dinter, T, Rozanov, VV, Burrows, JP and Bracher, A (2015) Retrieving the availability of light in the ocean utilising spectral signatures of vibrational Raman scattering in hyper-spectral satellite measurements. Ocean Science, 11(3). 373-389. doi:10.5194/os-11-373-2015

Friedrich, J, Janssen, F, Aleynik, D, Bange, HW, Boltacheva, N, Çagatay, MN, Dale, AW, Etiope, G, Erdem, Z, Geraga, M, Gilli, A, Gomoiu, MT, Hall, POJ, Hansson, D, He, Y, Holtappels, M, Kirf, MK, Kononets, M, Konovalov, S, Lichtschlag, A, Livingstone, DM, Marinaro, G, Mazlumyan, S, Naeher, S, North, RP, Papatheodorou, G, Pfannkuche, O, Prien, R, Rehder, G, Schubert, CJ, Soltwedel, T, Sommer, S, Stahl, H, Stanev, EV, Teaca, A, Tengberg, A, Waldmann, C, Wehrli, B and Wenzhöfer, F (2014) Investigating hypoxia in aquatic environments: diverse approaches to addressing a complex phenomenon. Biogeosciences, 11(4). 1215-1259. doi:10.5194/bg-11-1215-2014

Hahn, CJ, Laso-Pérez, R, Vulcano, F, Vaziourakis, KM, Stokke, R, Steen, IH, Teske, A, Boetius, A, Liebeke, M, Amann, R, Knittel, K and Wegener, G (2020) “Candidatus Ethanoperedens,” a thermophilic genus of Archaea mediating the anaerobic oxidation of ethane. mBio, 11(2). doi:10.1128/mBio.00600-20

Kreiter, S, Feeser, V, Kreiter, M, Mörz, T and Grupe, B (2006) A distinct element simulation including surface tension - towards the modeling of gas hydrate behavior. Computational Geosciences, 11. 117-129. doi:10.1007/s10596-006-9034-6

Kropp, C, Lipp, J, Schmidt, AL, Seisenberger, C, Linde, M, Hinrichs, KU and Babinger, P (2022) Identification of acetylated diether lipids in halophilic Archaea. MicrobiologyOpen, 11(3). doi:10.1002/mbo3.1299

Ma, C, Coffinet, S, Lipp, JS, Hinrichs, KU and Zhang, C (2020) Marine Group II Euryarchaeota contribute to the archaeal lipid pool in Northwestern Pacific Ocean surface waters. Frontiers in Microbiology, 11. doi:10.3389/fmicb.2020.01034

Marchant, HK, Ahmerkamp, S, Lavik, G, Tegetmeyer, HE, Graf, J, Klatt, JM, Holtappels, M, Walpersdorf, E and Kuypers, MMM (2017) Denitrifying community in coastal sediments performs aerobic and anaerobic respiration simultaneously. The ISME Journal, 11(8). 1799-1812. doi:10.1038/ismej.2017.51

Meier, DV, Pjevac, P, Bach, W, Hourdez, S, Girguis, PR, Vidoudez, C, Amann, R and Meyerdierks, A (2017) Niche partitioning of diverse sulfur-oxidizing bacteria at hydrothermal vents. The ISME Journal, 11(7). 1545-1558. doi:10.1038/ismej.2017.37 PANGAEA Supplementary Data

Perner, M, Bach, W, Hentscher, M, Koschinsky, A, Garbe-Schönberg, CD, Strauss, H and Streit, WR (2009) Short-term microbial and physico-chemical variability in low-temperature hydrothermal fluids near 5°S on the Mid-Atlantic Ridge. Environmental Microbiology, 11(10). 2526-2541. doi:10.1111/j.1462-2920.2009.01978.x

Ponnudurai, R, Kleiner, M, Sayavedra, L, Petersen, JM, Moche, M, Otto, A, Becher, D, Takeuchi, T, Satoh, N, Dubilier, N, Schweder, T and Markert, S (2017) Metabolic and physiological interdependencies in the Bathymodiolus azoricus symbiosis. The ISME Journal, 11(2). 463-477. doi:10.1038/ismej.2016.124

Sahling, H, Römer, M, Pape, T, Bergès, B, dos Santos Ferreira, C, Boelmann, J, Geprägs, P, Tomczyk, M, Nowald, N, Dimmler, W, Schroedter, L, Glockzin, M and Bohrmann, G (2014) Gas emissions at the continental margin west of Svalbard: mapping, sampling, and quantification. Biogeosciences, 11(21). 6029-6046. doi:10.5194/bg-11-6029-2014 PANGAEA Supplementary Data

Santelli, CM, Edgcomb, VP, Bach, W and Edwards, KJ (2009) The diversity and abundance of bacteria inhabiting seafloor lavas positively correlate with rock alteration. Environmental Microbiology, 11(1). 86-98. doi:10.1111/j.1462-2920.2008.01743.x

Schubotz, F, Meyer-Dombard, DR, Bradley, AS, Fredricks, HF, Hinrichs, KU, Shock, EL and Summons, RE (2013) Spatial and temporal variability of biomarkers and microbial diversity reveal metabolic and community flexibility in Streamer Biofilm Communities in the Lower Geyser Basin, Yellowstone National Park. Geobiology, 11(6). 549-569. doi:10.1111/gbi.12051

Schubotz, F, Wakeham, SG, Lipp, JS, Fredricks, HF and Hinrichs, KU (2009) Detection of microbial biomass by intact polar membrane lipid analysis in the water column and surface sediments of the Black Sea. Environmental Microbiology, 11(10). 2720-2734. doi:10.1111/j.1462-2920.2009.01999.x

Silvestri, A, Pätzold, J, Fratzl, P, Scheffel, A and Faivre, D (2020) Surface-enhanced Raman scattering microspectroscopy enables the direct characterization of biomineral-associated organic material on single calcareous microskeletons. The Journal of Physical Chemistry Letters, 11(20). 8623-8629. doi:10.1021/acs.jpclett.0c02041

Steinke, N, Vidal‐Melgosa, S, Schultz‐Johansen, M and Hehemann, JH (2022) Biocatalytic quantification of α‐glucan in marine particulate organic matter. MicrobiologyOpen, 11(3). e1289. doi:10.1002/mbo3.1289

Teichert, S and Freiwald, A (2014) Polar coralline algal CaCO3-production rates correspond to intensity and duration of the solar radiation. Biogeosciences, 11(3). 833-842. doi:10.5194/bg-11-833-2014

Zhu, R, Lin, YS, Lipp, JS, Meador, TB and Hinrichs, KU (2014) Optimizing sample pretreatment for compound-specific stable carbon isotopic analysis of amino sugars in marine sediment. Biogeosciences, 11(17). 4869-4880. doi:10.5194/bg-11-4869-2014

Zielinski, FU, Pernthaler, A, Duperron, S, Raggi, L, Giere, O, Borowski, C and Dubilier, N (2009) Widespread occurrence of an intranuclear bacterial parasite in vent and seep bathymodiolin mussels. Environmental Microbiology, 11. 1150-1167. doi:10.1111/j.1462-2920.2008.01847.x

109

Kellermann, MY, Wegener, G, Elvert, M, Yoshinaga, MY, Lin, YS, Holler, T, Mollar, XP, Knittel, K and Hinrichs, KU (2012) Autotrophy as a predominant mode of carbon fixation in anaerobic methane-oxidizing microbial communities. Proceedings of the National Academy of Sciences of the United States of America, 109. 19321-19326. doi:10.1073/pnas.1208795109

Lang, SQ, Früh-Green, GL, Kelley, DS, Lilley, MD, Proskurowski, G and Reeves, EP (2012) H2/CH4 ratios cannot reliably distinguish abiotic vs. biotic methane in natural hydrothermal systems. Proceedings of the National Academy of Sciences, 109(47). E3210-E3210. doi:10.1073/pnas.1213138109

Salman, V, Amann, R, Shub, DA and Schulz-Vogt, HN (2012) Multiple self-splicing introns in the 16S rRNA genes of giant sulfur bacteria. Proceedings of the National Academy of Sciences of the United States of America, 109(11). 4203-4208. doi:10.1073/pnas.1120192109

Wehrmann, LM, Arndt, S, März, C, Ferdelman, TG and Brunner, B (2013) The evolution of early diagenetic signals in Bering Sea subseafloor sediments in response to varying organic carbon deposition over the last 4.3 Ma. Geochimica et Cosmochimica Acta, 109. 175-196. doi:10.1016/j.gca.2013.01.025

108

Ferralis, N, Matys, ED, Knoll, AH, Hallmann, C and Summons, RE (2016) Rapid, direct and non-destructive assessment of fossil organic matter via microRaman spectroscopy. Carbon, 108. 440-449. doi:10.1016/j.carbon.2016.07.039

Holler, T, Wegener, G, Niemann, H, Deusner, C, Ferdelman, TG, Boetius, A, Brunner, B and Widdel, F (2011) Carbon and sulfur back flux during anaerobic microbial oxidation of methane and coupled sulfate reduction. Proceedings of the National Academy of Sciences of the United States of America, 108(52). E1484-E1490. doi:10.1073/pnas.1106032108

Kamp, A, de Beer, D, Nitsch, JL, Lavik, G and Stief, P (2011) Diatoms respire nitrate to survive dark and anoxic conditions. Proceedings of the National Academy of Sciences of the United States of America, 108(14). 5649-5654. doi:10.1073/pnas.1015744108

Lendt, R, Thomas, H, Hupe, A and Ittekkot, V (2003) The response of the near surface carbonate system of the northwestern Arabian Sea to the SW monsoon and related biological forcing. Journal of Geophysical Research-Oceans, 108. 3222. doi:10.1029/2000JC000771

Ruff, SE, Probandt, D, Zinkann, AC, Iversen, MH, Klaas, C, Würzberg, L, Krombholz, N, Wolf-Gladrow, D, Amann, R and Knittel, K (2014) Indications for algae-degrading benthic microbial communities in deep-sea sediments along the Antarctic Polar Front. Deep Sea Research Part II: Topical Studies in Oceanography, 108. 6-16. doi:10.1016/j.dsr2.2014.05.011

107

Heeschen, KU, Hohnberg, HJ, Haeckel, M, Abegg, F, Drews, M and Bohrmann, G (2007) In situ hydrocarbon concentrations from pressurized cores in surface sediments, Northern Gulf of Mexico. Marine Chemistry, 107(4). 498-515. doi:10.1016/j.marchem.2007.08.008 PANGAEA Supplementary Data

Khalili, A, Morad, MR, Matyka, M, Liu, B, Malekmohammadi, R, Weise, J and Kuypers, MMM (2014) Porosity variation below a fluid–porous interface. Chemical Engineering Science, 107. 311-316. doi:10.1016/j.ces.2013.12.021

Roy, S, Senger, K, Hovland, M, Römer, M and Braathen, A (2019) Geological controls on shallow gas distribution and seafloor seepage in an Arctic fjord of Spitsbergen, Norway. Marine and Petroleum Geology, 107. 237-254. doi:10.1016/j.marpetgeo.2019.05.021

106

Oehler, T, Martinez, R, Schückel, U, Winter, C, Kröncke, I and Schlüter, M (2015) Seasonal and spatial variations of benthic oxygen and nitrogen fluxes in the Helgoland Mud Area (southern North Sea). Continental Shelf Research, 106. 118-129. doi:10.1016/j.csr.2015.06.009 PANGAEA Supplementary Data

105

Deusner, C, Meyer, V and Ferdelman, TG (2010) High-Pressure Systems for Gas-Phase Free Continuous Incubation of Enriched Marine Microbial Communities Performing Anaerobic Oxidation of Methane. Biotechnology and Bioengineering, 105(3). 524-533. doi:10.1002/bit.22553

104

Badur, AH, Ammar, EM, Yalamanchili, G, Hehemann, JH and Rao, CV (2020) Characterization of the GH16 and GH17 laminarinases from Vibrio breoganii 1C10. Applied Microbiology and Biotechnology, 104(1). 161-171. doi:10.1007/s00253-019-10243-0

103

Biddle, JF, Lipp, JS, Lever, MA, Lloyd, K, Sorensen, KB, Anderson, R, Fredricks, HF, Elvert, M, Kelly, TJ, Schrag, DP, Sogin, ML, Brenchley, JE, Teske, AP, House, CH and Hinrichs, KU (2006) Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru. Proceedings of the National Academy of Sciences, 103(10). 3846-3851. doi:10.1073/pnas.0600035103

Hinrichs, KU, Hayes, JM, Bach, W, Spivack, AJ, Holm, NG, Hmelo, LR, Johnson, GC and Sylva, SP (2006) Biological formation of ethane and propane in the deep marine subsurface. Proceedings of the National Academy of Sciences, USA, 103. 14684-14689. doi:10.1073/pnas.0606545103

Mau, S, Rehder, G, Sahling, H, Schleicher, T and Linke, P (2014) Seepage of methane at Jaco Scar, a slide caused by seamount subduction offshore Costa Rica. International Journal of Earth Sciences, 103(7). 1801-1815. doi:10.1007/s00531-012-0822-z PANGAEA Supplementary Data

Tavormina, PL, Kellermann, MY, Antony, CP, Tocheva, EI, Dalleska, NF, Jensen, AJ, Valentine, DL, Hinrichs, KU, Jensen, GJ, Dubilier, N and Orphan, VJ (2017) Starvation and recovery in the deep-sea methanotroph Methyloprofundus sedimenti. Molecular Microbiology, 103(2). 242-252. doi:10.1111/mmi.13553

102

Reisky, L, Stanetty, C, Mihovilovic, MD, Schweder, T, Hehemann, JH and Bornscheuer, UT (2018) Biochemical characterization of an ulvan lyase from the marine flavobacterium Formosa agariphila KMM 3901T. Applied Microbiology and Biotechnology, 102(16). 6987-6996. doi:10.1007/s00253-018-9142-y

101

Brock, J, Rhiel, E, Beutler, M, Salman, V and Schulz-Vogt, HN (2012) Unusual polyphosphate inclusions observed in a marine Beggiatoa strain. Journal of Microbiology, 101(2). 347-357. doi:10.1007/s10482-011-9640-8

Paulick, H and Bach, W (2006) Phyllosilicate Alteration Mineral Assemblages in the Active Subsea-Floor Pacmanus Hydrothermal System, Papua New Guinea, ODP Leg 193. Economic Geology, 101(3). 633-650. doi:10.2113/gsecongeo.101.3.633

10

Ahmerkamp, S, Marchant, HK, Peng, C, Probandt, D, Littmann, S, Kuypers, MMM and Holtappels, M (2020) The effect of sediment grain properties and porewater flow on microbial abundance and respiration in permeable sediments. Scientific Reports, 10(1). doi:10.1038/s41598-020-60557-7

Aromokeye, DA, Kulkarni, AC, Elvert, M, Wegener, G, Henkel, S, Coffinet, S, Eickhorst, T, Oni, OE, Richter-Heitmann, T, Schnakenberg, A, Taubner, H, Wunder, L, Yin, X, Zhu, Q, Hinrichs, KU, Kasten, S and Friedrich, MW (2020) Rates and microbial players of iron-driven anaerobic oxidation of methane in methanic marine sediments. Frontiers in Microbiology, 10. doi:10.3389/fmicb.2019.03041

Audzijonyte, A, Krylova, EM, Sahling, H and Vrijenhoek, RC (2012) Molecular taxonomy reveals broad trans-oceanic distributions and high species diversity of deep-sea clams (Bivalvia: Vesicomydae: Pliocardiinae) in chemosynthetic environments. Systematics and Biodiversity, 10. 403-415. doi:10.1080/14772000.2012.744112 PANGAEA Supplementary Data

Badia, A, Jorba, O, Voulgarakis, A, Dabdub, D, Pérez García-Pando, C, Hilboll, A, Gonçalves, M and Janjic, Z (2017) Description and evaluation of the Multiscale Online Nonhydrostatic AtmospheRe CHemistry model (NMMB-MONARCH) version 1.0: gas-phase chemistry at global scale. Geoscientific Model Development, 10(2). 609-638. doi:10.5194/gmd-10-609-2017

Behrendt, A, de Beer, D and Stief, P (2013) Vertical activity distribution of dissimilatory nitrate reduction in coastal marine sediments. Biogeosciences, 10(11). 7509-7523. doi:10.5194/bg-10-7509-2013

Brocke, HJ, Polerecky, L, de Beer, D, Weber, M, Claudet, J and Nugues, MM (2015) Organic matter degradation drives benthic cyanobacterial mat abundance on Caribbean coral reefs. PLOS ONE, 10(5). e0125445. doi:10.1371/journal.pone.0125445 PANGAEA Supplementary Data

Böhnke, S, Sass, K, Gonnella, G, Diehl, A, Kleint, C, Bach, W, Zitoun, R, Koschinsky, A, Indenbirken, D, Sander, SG, Kurtz, S and Perner, M (2019) Parameters governing the community structure and element turnover in Kermadec volcanic ash and hydrothermal fluids as monitored by inorganic electron donor consumption, autotrophic CO2 fixation and 16S tags of the transcriptome in incubation experiments. Frontiers in Microbiology, 10. doi:10.3389/fmicb.2019.02296

Chennu, A, Volkenborn, N, de Beer, D, Wethey, DS, Woodin, SA and Polerecky, L (2015) Effects of bioadvection by Arenicola marina on microphytobenthos in permeable sediments. PLOS ONE, 10(7). e0134236. doi:10.1371/journal.pone.0134236 PANGAEA Supplementary Data

Dyksma, S, Bischof, K, Fuchs, BM, Hoffmann, K, Meier, D, Meyerdierks, A, Pjevac, P, Probandt, D, Richter, M, Stepanauskas, R and Mußmann, M (2016) Ubiquitous Gammaproteobacteria dominate dark carbon fixation in coastal sediments. The ISME Journal, 10(8). 1939-1953. doi:10.1038/ismej.2015.257

Felden, J, Lichtschlag, A, Wenzhöfer, F, de Beer, D, Feseker, T, Pop Ristova, P, de Lange, GJ and Boetius, A (2013) Limitations of microbial hydrocarbon degradation at the Amon mud volcano (Nile deep-sea fan). Biogeosciences, 10(5). 3269-3283. doi:10.5194/bg-10-3269-2013 PANGAEA Supplementary Data

Gutknecht, E, Dadou, I, Le Vu, B, Cambon, G, Sudre, J, Garçon, V, Machu, E, Rixen, T, Kock, A, Flohr, A, Paulmier, A and Lavik, G (2013) Coupled physical/biogeochemical modeling including O2-dependent processes in the Eastern Boundary Upwelling Systems: application in the Benguela. Biogeosciences, 10(6). 3559-3591. doi:10.5194/bg-10-3559-2013

Gutknecht, E, Dadou, I, Marchesiello, P, Cambon, G, Le Vu, B, Sudre, J, Garçon, V, Machu, E, Rixen, T, Kock, A, Flohr, A, Paulmier, A and Lavik, G (2013) Nitrogen transfers off Walvis Bay: a 3-D coupled physical/biogeochemical modeling approach in the Namibian upwelling system. Biogeosciences, 10(6). 4117-4135. doi:10.5194/bg-10-4117-2013

Hertkorn, N, Harir, M, Koch, BP, Michalke, B and Schmitt-Kopplin, P (2013) High-field NMR spectroscopy and FTICR mass spectrometry: powerful discovery tools for the molecular level characterization of marine dissolved organic matter. Biogeosciences, 10(3). 1583-1624. doi:10.5194/bg-10-1583-2013

Holtappels, M, Noss, C, Hancke, K, Cathalot, C, McGinnis, DF, Lorke, A and Glud, RN (2015) Aquatic eddy correlation: Quantifying the artificial flux caused by stirring-sensitive O2 sensors. PLOS ONE, 10(1). e0116564. doi:10.1371/journal.pone.0116564 PANGAEA Supplementary Data

Huang, X, Liu, X, Xue, Y, Pan, B, Xiao, L, Wang, S, Lever, MA, Hinrichs, KU, Inagaki, F, Liu, C and Han, J (2022) Methane production by facultative anaerobic wood-rot fungi via a new halomethane-dependent pathway. Microbiology Spectrum, 10(5). doi:10.1128/spectrum.01700-22

Ivarsson, M, Peckmann, JL, Tehler, A, Broman, C, Bach, W, Behrens, K, Reitner, J, Böttcher, ME and Norbäck Ivarsson, L (2015) Zygomycetes in vesicular basanites from Vesteris Seamount, Greenland Basin – a new type of cryptoendolithic fungi. PLOS ONE, 10(7). e0133368. doi:10.1371/journal.pone.0133368

Iversen, MH and Ploug, H (2013) Temperature effects on carbon-specific respiration rate and sinking velocity of diatom aggregates - potential implications for deep ocean export processes. Biogeosciences, 10(6). 4073-4085. doi:10.5194/bg-10-4073-2013 PANGAEA Supplementary Data

Kalvelage, T, Lavik, G, Jensen, MM, Revsbech, NP, Löscher, CR, Schunck, H, Desai, DK, Hauss, H, Kiko, R, Holtappels, M, LaRoche, J, Schmitz, RA, Graco, MI and Kuypers, MMM (2015) Aerobic microbial respiration in oceanic oxygen minimum zones. PLOS ONE, 10(7). e0133526. doi:10.1371/journal.pone.0133526

Klasek, SA, Torres, ME, Loher, M, Bohrmann, G, Pape, T and Colwell, FS (2019) Deep-sourced fluids from a convergent margin host distinct subseafloor microbial communities that change upon mud flow expulsion. Frontiers in Microbiology, 10. doi:10.3389/fmicb.2019.01436

Krüger, M, Blumenberg, M, Kasten, S, Wieland, A, Känel, L, Klock, JH, Michaelis, W and Seifert, R (2008) A novel, multi-layered methanotrophic microbial mat system growing on the sediment of the Black Sea. Environmental Microbiology, 10(8). 1934-1947. doi:10.1111/j.1462-2920.2008.01607.x

Laso-Pérez, R, Hahn, C, van Vliet, DM, Tegetmeyer, HE, Schubotz, F, Smit, NT, Pape, T, Sahling, H, Bohrmann, G, Boetius, A, Knittel, K and Wegener, G (2019) Anaerobic degradation of non-methane alkanes by “Candidatus Methanoliparia” in hydrocarbon seeps of the Gulf of Mexico. mBio, 10(4). doi:10.1128/mBio.01814-19

Liu, W, Alfken, S, Wörmer, L, Lipp, JS and Hinrichs, KU (2022) Hidden molecular clues in marine sediments revealed by untargeted mass spectrometry imaging. Frontiers in Earth Science, 10. doi:10.3389/feart.2022.931157

Loescher, HW, Vargas, R, Mirtl, M, Morris, B, Pauw, J, Yu, X, Kutsch, W, Mabee, P, Tang, J, Ruddell, BL, Pulsifer, P, Bäck, J, Zacharias, S, Grant, M, Feig, G, Zhang, L, Waldmann, C and Genazzio, MA (2022) Building a global ecosystem research infrastructure to address global grand challenges for macrosystem ecology. Earth's Future, 10(5). e2020EF001696. doi:10.1029/2020EF001696

Lösekann, T, Robador, A, Niemann, H, Knittel, K, Boetius, A and Dubilier, N (2008) Endosymbioses between bacteria and deep-sea siboglinid tubeworms from an Arctic cold seep (Haakon Mosby Mud Volcano, Barents Sea). Environmental Microbiology, 10. 3237-3254. doi:10.1111/j.1462-2920.2008.01712.x

Morato, T, Kvile, KØ, Taranto, GH, Tempera, F, Narayanaswamy, BE, Hebbeln, D, Menezes, GM, Wienberg, C, Santos, RS and Pitcher, TJ (2013) Seamount physiography and biology in the north-east Atlantic and Mediterranean Sea. Biogeosciences, 10(5). 3039-3054. doi:10.5194/bg-10-3039-2013

Preto, N, Agnini, C, Rigo, M, Sprovieri, M and Westphal, H (2013) The calcareous nannofossil Prinsiosphaera achieved rock-forming abundances in the latest Triassic of western Tethys: consequences for the δ13C of bulk carbonate. Biogeosciences, 10(9). 6053-6068. doi:10.5194/bg-10-6053-2013

Seah, BKB, Antony, CP, Huettel, B, Zarzycki, J, Schada von Borzyskowski, L, Erb, TJ, Kouris, A, Kleiner, M, Liebeke, M, Dubilier, N and Gruber-Vodicka, HR (2019) Sulfur-oxidizing symbionts without canonical genes for autotrophic CO2 fixation. mBio, 10(3). doi:10.1128/mBio.01112-19

Seitz, KW, Lazar, CS, Hinrichs, KU, Teske, AP and Baker, BJ (2016) Genomic reconstruction of a novel, deeply branched sediment archaeal phylum with pathways for acetogenesis and sulfur reduction. The ISME Journal, 10(7). 1696-1705. doi:10.1038/ismej.2015.233

Song, GD, Liu, SM, Marchant, H, Kuypers, MMM and Lavik, G (2013) Anammox, denitrification and dissimilatory nitrate reduction to ammonium in the East China Sea sediment. Biogeosciences, 10(11). 6851-6864. doi:10.5194/bg-10-6851-2013

Tran, S, Bonsang, B, Gros, V, Peeken, I, Sarda-Esteve, R, Belviso, S and Bernhardt, A (2013) A survey of carbon monoxide and non-methane hydrocarbons in the Arctic Ocean during summer 2010. Biogeosciences, 10(3). 1909-1935. doi:10.5194/bg-10-1909-2013

Varliero, G, Bienhold, C, Schmid, F, Boetius, A and Molari, M (2019) Microbial diversity and connectivity in deep-sea sediments of the South Atlantic Polar Front. Frontiers in Microbiology, 10. doi:10.3389/fmicb.2019.00665

Wegener, G, Niemann, H, Elvert, M, Hinrichs, KU and Boetius, A (2008) Assimilation of methane and inorganic carbon by microbial communities mediating the anaerobic oxidation of methane. Environmental Microbiology, 10(9). 2287-2298. doi:10.1111/j.1462-2920.2008.01653.x

Wienberg, C, Wintersteller, P, Beuck, L and Hebbeln, D (2013) Coral Patch seamount (NE Atlantic) - a sedimentological and megafaunal reconnaissance based on video and hydroacoustic surveys. Biogeosciences, 10(5). 3421-3443. doi:10.5194/bg-10-3421-2013 PANGAEA Supplementary Data

Youle, M, Rohwer, F, Stacy, A, Whiteley, M, Steel, BC, Delalez, NJ, Nord, AL, Berry, RM, Armitage, JP, Kamoun, S, Hogenhout, S, Diggle, SP, Gurney, J, Pollitt, EJG, Boetius, A and Cary, SC (2012) The microbial olympics. Nature Reviews Microbiology, 10. 583-588. doi:10.1038/nrmicro2837

de Beer, D, Haeckel, M, Neumann, J, Wegener, G, Inagaki, F and Boetius, A (2013) Saturated CO2 inhibits microbial processes in CO2-vented deep-sea sediments. Biogeosciences, 10(8). 5639-5649. doi:10.5194/bg-10-5639-2013

van Maldegem, LM, Sansjofre, P, Weijers, JWH, Wolkenstein, K, Strother, PK, Wörmer, L, Hefter, J, Nettersheim, BJ, Hoshino, Y, Schouten, S, Sinninghe Damsté, JS, Nath, N, Griesinger, C, Kuznetsov, NB, Elie, M, Elvert, M, Tegelaar, E, Gleixner, G and Hallmann, C (2019) Bisnorgammacerane traces predatory pressure and the persistent rise of algal ecosystems after Snowball Earth. Nature Communications, 10(1). doi:10.1038/s41467-019-08306-x

1

Baker, BJ, Saw, JH, Lind, AE, Lazar, CS, Hinrichs, KU, Teske, AP and Ettema, TJG (2016) Genomic inference of the metabolism of cosmopolitan subsurface Archaea, Hadesarchaea. Nature Microbiology, 1(3). 16002. doi:10.1038/nmicrobiol.2016.2

Holler, T, Wegener, G, Knittel, K, Boetius, A, Brunner, B, Kuypers, MMM and Widdel, F (2009) Substantial C-13/C-12 and D/H fractionation during anaerobic oxidation of methane by marine consortia enriched in vitro. Environmental Microbiology Reports, 1(5). 370-376. doi:10.1111/j.1758-2229.2009.00074.x

Miksch, S, Meiners, M, Meyerdierks, A, Probandt, D, Wegener, G, Titschack, J, Jensen, MA, Ellrott, A, Amann, R and Knittel, K (2021) Bacterial communities in temperate and polar coastal sands are seasonally stable. ISME Communications, 1(1). doi:10.1038/s43705-021-00028-w

Petersen, JM and Dubilier, N (2009) Methanotrophic symbioses in marine invertebrates. Environmental Microbiology Reports, 1. 319-335. doi:10.1111/j.1758-2229.2009.00081.x

Ramette, A, Boetius, A, Danchin, A, Eloe, E, Celussi, M, Croal, L, Gifford, S, Gomez-Consarnau, L, Hahn, MW, Hoehler, TM, Jørgensen, BB, Karl, DM, Kolter, R, Moran, MA, Müller, V, Ollivier, B, Guyot, F, Oremland, RS, Stolz, JF, Pearson, A, Stahl, DA, Teusink, B, Bruggeman, FJ, Molenaar, D, Stoeck, T, Epstein, S, Tümmler, B, Wommack, KE and Zehr, JP (2009) Crystal ball - 2009. Environmental Microbiology Reports, 1(1). 3-26. doi:10.1111/j.1758-2229.2008.00010.x

06

Oni, O, Miyatake, T, Kasten, S, Richter-Heitmann, T, Fischer, D, Wagenknecht, L, Kulkarni, A, Blumers, M, Shylin, SI, Ksenofontov, V, Costa, BFO, Klingelhöfer, G and Friedrich, MW (2015) Distinct microbial populations are tightly linked to the profile of dissolved iron in the methanic sediments of the Helgoland mud area, North Sea. Frontiers in Microbiology, 06. doi:10.3389/fmicb.2015.00365 PANGAEA Supplementary Data

This list was generated on Fri Dec 9 03:27:38 2022 CET.