Wunder, LC, Breuer, I, Willis-Poratti, G, Aromokeye, DA, Henkel, S, Richter-Heitmann, T, Yin, X and Friedrich, MW (2024) Manganese reduction and associated microbial communities in Antarctic surface sediments. Frontiers in Microbiology, 15. doi:10.3389/fmicb.2024.1398021
Yin, X, Zhou, G, Cai, M, Richter-Heitmann, T, Zhu, QZ, Maeke, M, Kulkarni, AC, Nimzyk, R, Elvert, M and Friedrich, MW (2024) Physiological versatility of ANME-1 and Bathyarchaeotoa-8 archaea evidenced by inverse stable isotope labeling. Microbiome, 12(1). doi:10.1186/s40168-024-01779-z
Gande, D, Hassenrück, C, Žure, M, Richter‐Heitmann, T, Willerslev, E and Friedrich, MW (2024) Recovering short DNA fragments from minerals and marine sediments: A comparative study evaluating lysis and isolation approaches. Environmental DNA, 6(2). doi:10.1002/edn3.547
Zhu, QZ, Yin, X, Taubner, H, Wendt, J, Friedrich, MW, Elvert, M, Hinrichs, KU and Middelburg, JJ (2024) Secondary production and priming reshape the organic matter composition in marine sediments. Science Advances, 10(20). doi:10.1126/sciadv.adm8096
Yin, X, Zhou, G, Wang, H, Han, D, Maeke, M, Richter-Heitmann, T, Wunder, LC, Aromokeye, DA, Zhu, QZ, Nimzyk, R, Elvert, M and Friedrich, MW (2024) Unexpected carbon utilization activity of sulfate-reducing microorganisms in temperate and permanently cold marine sediments. The ISME Journal, 18(1). doi:10.1093/ismejo/wrad014
Yang, Y, Rivera Pérez, CA, Richter-Heitmann, T, Nimzyk, R, Friedrich, MW and Reich, M (2023) Effects of oxygen availability on mycobenthic communities of marine coastal sediments. Scientific Reports, 13(1). doi:10.1038/s41598-023-42329-1
Han, D, Richter-Heitmann, T, Kim, JH, Friedrich, MW, Yin, X, Elvert, M, Ryu, JS, Jang, K and Nam, SI (2023) Influence of sedimentary deposition on the microbial assembly process in Arctic Holocene marine sediments. Frontiers in Microbiology, 14. doi:10.3389/fmicb.2023.1231839
Yin, X, Zhou, G, Cai, M, Zhu, QZ, Richter-Heitmann, T, Aromokeye, DA, Liu, Y, Nimzyk, R, Zheng, Q, Tang, X, Elvert, M, Li, M and Friedrich, MW (2022) Catabolic protein degradation in marine sediments confined to distinct archaea. The ISME Journal. doi:10.1038/s41396-022-01210-1
Cai, M, Richter-Heitmann, T, Yin, X, Huang, WC, Yang, Y, Zhang, C, Duan, C, Pan, J, Liu, Y, Liu, Y, Friedrich, MW and Li, M (2021) Ecological features and global distribution of Asgard archaea. Science of The Total Environment, 758. 143581. doi:10.1016/j.scitotenv.2020.143581
Schnakenberg, A, Aromokeye, DA, Kulkarni, A, Maier, L, Wunder, LC, Richter-Heitmann, T, Pape, T, Ristova, PP, Bühring, SI, Dohrmann, I, Bohrmann, G, Kasten, S and Friedrich, MW (2021) Electron acceptor availability shapes Anaerobically Methane Oxidizing Archaea (ANME) communities in South Georgia sediments. Frontiers in Microbiology, 12. doi:10.3389/fmicb.2021.617280
Wunder, LC, Aromokeye, DA, Yin, X, Richter-Heitmann, T, Willis-Poratti, G, Schnakenberg, A, Otersen, C, Dohrmann, I, Römer, M, Bohrmann, G, Kasten, S and Friedrich, MW (2021) Iron and sulfate reduction structure microbial communities in (sub-)Antarctic sediments. The ISME Journal. doi:10.1038/s41396-021-01014-9
Aromokeye, DA, Willis-Poratti, G, Wunder, LC, Yin, X, Wendt, J, Richter-Heitmann, T, Henkel, S, Vázquez, S, Elvert, M, Mac Cormack, W and Friedrich, MW (2021) Macroalgae degradation promotes microbial iron reduction via electron shuttling in coastal Antarctic sediments. Environment International, 156. 106602. doi:10.1016/j.envint.2021.106602
Aromokeye, DA, Oni, OE, Tebben, J, Yin, X, Richter-Heitmann, T, Wendt, J, Nimzyk, R, Littmann, S, Tienken, D, Kulkarni, AC, Henkel, S, Hinrichs, KU, Elvert, M, Harder, T, Kasten, S and Friedrich, MW (2020) Crystalline iron oxides stimulate methanogenic benzoate degradation in marine sediment-derived enrichment cultures. The ISME Journal. doi:10.1038/s41396-020-00824-7
Cai, M, Liu, Y, Yin, X, Zhou, Z, Friedrich, MW, Richter-Heitmann, T, Nimzyk, R, Kulkarni, A, Wang, X, Li, W, Pan, J, Yang, Y, Gu, JD and Li, M (2020) Diverse Asgard archaea including the novel phylum Gerdarchaeota participate in organic matter degradation. Science China Life Sciences. doi:10.1007/s11427-020-1679-1
Vieira, S, Sikorski, J, Dietz, S, Herz, K, Schrumpf, M, Bruelheide, H, Scheel, D, Friedrich, MW and Overmann, J (2020) Drivers of the composition of active rhizosphere bacterial communities in temperate grasslands. The ISME Journal, 14(2). 463-475. doi:10.1038/s41396-019-0543-4
Aromokeye, DA, Kulkarni, AC, Elvert, M, Wegener, G, Henkel, S, Coffinet, S, Eickhorst, T, Oni, OE, Richter-Heitmann, T, Schnakenberg, A, Taubner, H, Wunder, L, Yin, X, Zhu, Q, Hinrichs, KU, Kasten, S and Friedrich, MW (2020) Rates and microbial players of iron-driven anaerobic oxidation of methane in methanic marine sediments. Frontiers in Microbiology, 10. doi:10.3389/fmicb.2019.03041
Yin, X, Cai, M, Liu, Y, Zhou, G, Richter-Heitmann, T, Aromokeye, DA, Kulkarni, AC, Nimzyk, R, Cullhed, H, Zhou, Z, Pan, J, Yang, Y, Gu, JD, Elvert, M, Li, M and Friedrich, MW (2020) Subgroup level differences of physiological activities in marine Lokiarchaeota. The ISME Journal. doi:10.1038/s41396-020-00818-5
Yin, X, Wu, W, Maeke, M, Richter-Heitmann, T, Kulkarni, AC, Oni, OE, Wendt, J, Elvert, M and Friedrich, MW (2019) CO2 conversion to methane and biomass in obligate methylotrophic methanogens in marine sediments. The ISME Journal, 13(8). 2107-2119. doi:10.1038/s41396-019-0425-9
Serrano, W, Olaechea, RM, Wink, J and Friedrich, MW (2019) Draft genome sequence of Streptomyces sp. strain RFCAC02, isolated from the gut microflora of the Pacific chub mackerel Scomber japonicus peruanus. Microbiology Resource Announcements, 8(23). doi:10.1128/MRA.00355-19
Serrano, W, Tarazona, UI, Olaechea, RM and Friedrich, MW (2018) Draft genome sequence of a new Vibrio strain with the potential to produce bacteriocin-like inhibitory substances, isolated from the gut microflora of scallop (Argopecten purpuratus). Genome Announcements, 6(20). doi:10.1128/genomeA.00419-18
Fortney, NW, He, S, Kulkarni, A, Friedrich, MW, Holz, C, Boyd, ES and Roden, EE (2018) Stable isotope probing for microbial iron reduction in Chocolate Pots hot spring, Yellowstone National Park. Applied and Environmental Microbiology, 84(11). doi:10.1128/AEM.02894-17
Aromokeye, DA, Richter-Heitmann, T, Oni, OE, Kulkarni, A, Yin, X, Kasten, S and Friedrich, MW (2018) Temperature controls crystalline iron oxide utilization by microbial communities in methanic ferruginous marine sediment incubations. Frontiers in Microbiology, 9. doi:10.3389/fmicb.2018.02574
Pop Ristova, P, Pichler, T, Friedrich, MW and Bühring, SI (2017) Bacterial diversity and biogeochemistry of two marine shallow-water hydrothermal systems off Dominica (Lesser Antilles). Frontiers in Microbiology, 8. doi:10.3389/fmicb.2017.02400
Pavloudi, C, Oulas, A, Vasileiadou, K, Kotoulas, G, De Troch, M, Friedrich, MW and Arvanitidis, C (2017) Diversity and abundance of sulfate-reducing microorganisms in a Mediterranean lagoonal complex (Amvrakikos Gulf, Ionian Sea) derived from dsrB gene. Aquatic Microbial Ecology, 79(3). 209-219. doi:10.3354/ame01829
Serrano, W, Tarazona, UI, Olaechea, RM and Friedrich, MW (2017) Draft genome sequence of Vibrio sp. strain V1B isolated from the gut microflora of the scallop Argopecten purpuratus. Genome Announcements, 5(42). doi:10.1128/genomeA.01130-17
Oni, OE and Friedrich, MW (2017) Metal oxide reduction linked to anaerobic methane oxidation. Trends in Microbiology, 25(2). 88-90. doi:10.1016/j.tim.2016.12.001
Reyes, C, Schneider, D, Thürmer, A, Kulkarni, A, Lipka, M, Sztejrenszus, SY, Böttcher, ME, Daniel, R and Friedrich, MW (2017) Potentially active iron, sulfur, and sulfate reducing bacteria in Skagerrak and Bothnian Bay sediments. Geomicrobiology Journal, 34(10). 840-850. doi:10.1080/01490451.2017.1281360
Costa, BFO, Blumers, M, Shylin, SI, Ksenofontov, V, Oni, O, Kasten, S, Fischer, D, Wagenknecht, L, Kulkarni, A, Friedrich, MW and Klingelhöfer, G (2016) Mössbauer spectroscopy and X-ray fluorescence studies on sediments from the methanic zone of the Helgoland mud area, North Sea. Hyperfine Interactions, 237(1). doi:10.1007/s10751-016-1297-2
Oni, O, Miyatake, T, Kasten, S, Richter-Heitmann, T, Fischer, D, Wagenknecht, L, Kulkarni, A, Blumers, M, Shylin, SI, Ksenofontov, V, Costa, BFO, Klingelhöfer, G and Friedrich, MW (2015) Distinct microbial populations are tightly linked to the profile of dissolved iron in the methanic sediments of the Helgoland mud area, North Sea. Frontiers in Microbiology, 06. doi:10.3389/fmicb.2015.00365
Hori, T, Aoyagi, T, Itoh, H, Narihiro, T, Oikawa, A, Suzuki, K, Ogata, A, Friedrich, MW, Conrad, R and Kamagata, Y (2015) Isolation of microorganisms involved in reduction of crystalline iron(III) oxides in natural environments. Frontiers in Microbiology, 6. doi:10.3389/fmicb.2015.00386
Oni, OE, Schmidt, F, Miyatake, T, Kasten, S, Witt, M, Hinrichs, KU and Friedrich, MW (2015) Microbial communities and organic matter composition in surface and subsurface sediments of the Helgoland mud area, North Sea. Frontiers in Microbiology, 6. doi:10.3389/fmicb.2015.01290
Friedrich, MW and Finster, KW (2014) How sulfur beats iron. Science, 344(6187). 974-975. doi:10.1126/science.1255442
Yin, X, Kulkarni, AC and Friedrich, MW (2019) DNA and RNA stable isotope probing of methylotrophic methanogenic archaea. In: Dumont, M and Hernández García, M (eds.) Stable Isotope Probing. Methods in Molecular Biology, 2046. Humana, New York, NY, 189-206. doi:10.1007/978-1-4939-9721-3_15