Items where Author is "de Beer, Dirk"

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Number of items: 49.


Teske, A, Wegener, G, Chanton, JP, White, D, MacGregor, B, Hoer, D, de Beer, D, Zhuang, G, Saxton, MA, Joye, SB, Lizarralde, D, Soule, SA and Ruff, SE (2021) Microbial communities under distinct thermal and geochemical regimes in Axial and Off-Axis sediments of Guaymas Basin. Frontiers in Microbiology, 12. doi:10.3389/fmicb.2021.633649

Koopmans, D, Holtappels, M, Chennu, A, Weber, M and de Beer, D (2020) High net primary production of Mediterranean seagrass (Posidonia oceanica) meadows determined with aquatic eddy covariance. Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00118

Molari, M, Guilini, K, Lott, C, Weber, M, de Beer, D, Meyer, S, Ramette, A, Wegener, G, Wenzhöfer, F, Martin, D, Cibic, T, De Vittor, C, Vanreusel, A and Boetius, A (2018) CO2 leakage alters biogeochemical and ecological functions of submarine sands. Science Advances, 4(2). eaao2040. doi:10.1126/sciadv.aao2040 PANGAEA Supplementary Data

Ahmerkamp, S, Winter, C, Krämer, K, de Beer, D, Janssen, F, Friedrich, J, Kuypers, MMM and Holtappels, M (2017) Regulation of benthic oxygen fluxes in permeable sediments of the coastal ocean. Limnology and Oceanography. doi:10.1002/lno.10544

Raulf, FF, Fabricius, K, Uthicke, S, de Beer, D, Abed, RMM and Ramette, A (2015) Changes in microbial communities in coastal sediments along natural CO2 gradients at a volcanic vent in Papua New Guinea. Environmental Microbiology, 17(10). 3678-3691. doi:10.1111/1462-2920.12729 PANGAEA Supplementary Data

Chennu, A, Volkenborn, N, de Beer, D, Wethey, DS, Woodin, SA and Polerecky, L (2015) Effects of bioadvection by Arenicola marina on microphytobenthos in permeable sediments. PLOS ONE, 10(7). e0134236. doi:10.1371/journal.pone.0134236 PANGAEA Supplementary Data

Brocke, HJ, Wenzhöfer, F, de Beer, D, Mueller, B, van Duyl, FC and Nugues, MM (2015) High dissolved organic carbon release by benthic cyanobacterial mats in a Caribbean reef ecosystem. Scientific Reports, 5. 8852. doi:10.1038/srep08852

Hofmann, LC, Fink, A, Bischof, K, de Beer, D and Hurd, C (2015) Microsensor studies on Padina from a natural CO2 seep: implications of morphology on acclimation to low pH. Journal of Phycology, 51(6). 1106-1115. doi:10.1111/jpy.12347 PANGAEA Supplementary Data

Brocke, HJ, Polerecky, L, de Beer, D, Weber, M, Claudet, J and Nugues, MM (2015) Organic matter degradation drives benthic cyanobacterial mat abundance on Caribbean coral reefs. PLOS ONE, 10(5). e0125445. doi:10.1371/journal.pone.0125445 PANGAEA Supplementary Data

Ionescu, D, Bizic-Ionescu, M, Khalili, A, Malekmohammadi, R, Morad, MR, de Beer, D and Grossart, HP (2015) A new tool for long-term studies of POM-bacteria interactions: overcoming the century-old Bottle Effect. Scientific Reports, 5. 14706. doi:10.1038/srep14706

Ionescu, D, Spitzer, S, Reimer, A, Schneider, D, Daniel, R, Reitner, J, de Beer, D and Arp, G (2014) Calcium dynamics in microbialite-forming exopolymer-rich mats on the atoll of Kiritimati, Republic of Kiribati, Central Pacific. Geobiology, 13(2). 170-180. doi:10.1111/gbi.12120

Stief, P, Fuchs-Ocklenburg, S, Kamp, A, Manohar, CS, Houbraken, J, Boekhout, T, de Beer, D and Stoeck, T (2014) Dissimilatory nitrate reduction by Aspergillus terreus isolated from the seasonal oxygen minimum zone in the Arabian Sea. BMC Microbiology, 14(35). doi:10.1186/1471-2180-14-35

Madden, P, Al-Raei, AM, Enright, AM, Chinalia, FA, de Beer, D, O'Flaherty, V and Collins, G (2014) Effect of sulfate on low-temperature anaerobic digestion. Frontiers in Microbiology, 5. doi:10.3389/fmicb.2014.00376

Feseker, T, Boetius, A, Wenzhöfer, F, Blandin, J, Olu, K, Yoerger, DR, Camilli, R, German, CR and de Beer, D (2014) Eruption of a deep-sea mud volcano triggers rapid sediment movement. Nature Communications, 5. 5385. doi:10.1038/ncomms6385 PANGAEA Supplementary Data

Beutler, M, Heisterkamp, IM, Piltz, B, Stief, P and de Beer, D (2014) Microscopic oxygen imaging based on fluorescein bleaching efficiency measurements. Microscopy Research and Technique, 77(5). 341-347. doi:10.1002/jemt.22350

Sevilgen, DS, de Beer, D, Al-Handal, AY, Brey, T and Polerecky, L (2014) Oxygen budgets in subtidal arctic (Kongsfjorden, Svalbard) and temperate (Helgoland, North Sea) microphytobenthic communities. Marine Ecology Progress Series, 504. 27-42. doi:10.3354/meps10672

Ionescu, D, Buchmann, B, Heim, C, Häusler, S, de Beer, D and Polerecky, L (2014) Oxygenic photosynthesis as a protection mechanism for cyanobacteria against iron-encrustation in environments with high Fe2+ concentrations. Frontiers in Microbiology, 5. doi:10.3389/fmicb.2014.00459

Häusler, S, Weber, M, de Beer, D and Ionescu, D (2014) Spatial distribution of diatom and cyanobacterial mats in the Dead Sea is determined by response to rapid salinity fluctuations. Extremophiles, 18(6). 1085-1094. doi:10.1007/s00792-014-0686-1

Häusler, S, Weber, M, Siebert, C, Holtappels, M, Noriega-Ortega, BE, de Beer, D and Ionescu, D (2014) Sulfate reduction and sulfide oxidation in extremely steep salinity gradients formed by freshwater springs emerging into the Dead Sea. FEMS Microbiology Ecology, 90(3). 956-969. doi:10.1111/1574-6941.12449

Winkel, M, de Beer, D, Lavik, G, Peplies, J and Mußmann, M (2013) Close association of active nitrifiers withBeggiatoamats covering deep-sea hydrothermal sediments. Environmental Microbiology, 16(6). 1612-1626. doi:10.1111/1462-2920.12316

Chennu, A, Färber, P, Volkenborn, N, Al-Najjar, MAA, Janssen, F, de Beer, D and Polerecky, L (2013) Hyperspectral imaging of the microscale distribution and dynamics of microphytobenthos in intertidal sediments. Limnology and Oceanography: Methods, 11. 511-528. doi:10.4319/lom.2013.11.511

Felden, J, Lichtschlag, A, Wenzhöfer, F, de Beer, D, Feseker, T, Pop Ristova, P, de Lange, GJ and Boetius, A (2013) Limitations of microbial hydrocarbon degradation at the Amon mud volcano (Nile deep-sea fan). Biogeosciences, 10(5). 3269-3283. doi:10.5194/bg-10-3269-2013 PANGAEA Supplementary Data

Yanagawa, K, Morono, Y, de Beer, D, Haeckel, M, Sunamura, M, Futagami, T, Hoshino, T, Terada, T, Nakamura, K, Urabe, T, Rehder, G, Boetius, A and Inagaki, F (2013) Metabolically active microbial communities in marine sediment under high-CO2 and low-pH extremes. Isme Journal, 7(3). 555-567. doi:10.1038/ismej.2012.124

Allers, E, Abed, RMM, Wehrmann, LM, Wang, T, Larsson, AI, Purser, A and de Beer, D (2013) Resistance of Lophelia pertusa to coverage by sediment and petroleum drill cuttings. Marine Pollution Bulletin, 74(1). 132-140. doi:10.1016/j.marpolbul.2013.07.016

Kamp, A, Stief, P, Knappe, J and de Beer, D (2013) Response of the Ubiquitous Pelagic Diatom Thalassiosira weissflogii to Darkness and Anoxia. PLoS ONE, 8(12). e82605. doi:10.1371/journal.pone.0082605

de Beer, D, Haeckel, M, Neumann, J, Wegener, G, Inagaki, F and Boetius, A (2013) Saturated CO2 inhibits microbial processes in CO2-vented deep-sea sediments. Biogeosciences, 10(8). 5639-5649. doi:10.5194/bg-10-5639-2013

Behrendt, A, de Beer, D and Stief, P (2013) Vertical activity distribution of dissimilatory nitrate reduction in coastal marine sediments. Biogeosciences, 10(11). 7509-7523. doi:10.5194/bg-10-7509-2013

Wangpraseurt, D, Weber, M, Røy, H, Polerecky, L, de Beer, D, Suharsono and Nugues, MM (2012) In Situ Oxygen Dynamics in Coral-Algal Interactions. PLoS ONE, 7(2). doi:10.1371/journal.pone.0031192

Heisterkamp, IM, Kamp, A, Schramm, A, de Beer, D and Stief, P (2012) Indirect control of the intracellular nitrate pool of intertidal sediment by the polychaete Hediste diversicolor. Marine Ecology Progress Series, 445. 181-192. doi:10.3354/meps09464

Gao, H, Matyka, M, Liu, B, Khalili, A, Kostka, JE, Collins, G, Jansen, S, Holtappels, M, Jensen, MM, Badewien, TH, Beck, M, Grunwald, M, de Beer, D, Lavik, G and Kuypers, MMM (2012) Intensive and extensive nitrogen loss from intertidal permeable sediments of the Wadden Sea. Limnology and Oceanography, 57(1). 185-198. doi:10.4319/lo.2012.57.1.0185

Al-Najjar, MAA, de Beer, D, Kühl, M and Polerecky, L (2012) Light utilization efficiency in photosynthetic microbial mats. Environmental Microbiology, 14(4). 982-992. doi:10.1111/j.1462-2920.2011.02676.x PANGAEA Supplementary Data

Grünke, S, Lichtschlag, A, de Beer, D, Felden, J, Salman, V, Ramette, A, Schulz-Vogt, HN and Boetius, A (2012) Mats of psychrophilic thiotrophic bacteria associated with cold seeps of the Barents Sea. Biogeosciences, 9(8). 2947-2960. doi:10.5194/bg-9-2947-2012 PANGAEA Supplementary Data

Abed, RMM, Ramette, A, Hübner, V, de Deckker, P and de Beer, D (2012) Microbial diversity of eolian dust sources from saline lake sediments and biological soil crusts in arid Southern Australia. FEMS Microbiology Ecology, 80(2). 294-304. doi:10.1111/j.1574-6941.2011.01289.x PANGAEA Supplementary Data

Kamp, A, de Beer, D, Nitsch, JL, Lavik, G and Stief, P (2011) Diatoms respire nitrate to survive dark and anoxic conditions. Proceedings of the National Academy of Sciences of the United States of America, 108(14). 5649-5654. doi:10.1073/pnas.1015744108

Bissett, A, Neu, TR and de Beer, D (2011) Dissolution of calcite in the twilight zone: bacterial control of dissolution of sinking planktonic carbonates is unlikely. PLoS ONE, 6(11). doi:10.1371/journal.pone.0026404

Hamza, W, Enan, MR, Al-Hassini, H, Stuut, JB and de Beer, D (2011) Dust storms over the Arabian Gulf: a possible indicator of climate changes consequences. Aquatic Ecosystem Health & Management, 14(3). 260-268. doi:10.1080/14634988.2011.601274

Grünke, S, Felden, J, Lichtschlag, A, Girnth, AC, de Beer, D, Wenzhöfer, F and Boetius, A (2011) Niche differentiation among mat-forming, sulfide-oxidizing bacteria at cold seeps of the Nile Deep Sea Fan (Eastern Mediterranean Sea). Geobiology, 9(4). 330-348. doi:10.1111/j.1472-4669.2011.00281.x PANGAEA Supplementary Data

Hinck, S, Mussmann, M, Salman, V, Neu, TR, Lenk, S, de Beer, D and Jonkers, HM (2011) Vacuolated Beggiatoa-like filaments from different hypersaline environments form a novel genus. Environmental Microbiology, 13(12). 3194-3205. doi:10.1111/j.1462-2920.2011.02513.x

Girnth, AC, Grünke, S, Lichtschlag, A, Felden, J, Knittel, K, Wenzhöfer, F, de Beer, D and Boetius, A (2011) A novel, mat-forming Thiomargarita population associated with a sulfidic fluid flow from a deep-sea mud volcano. Environmental Microbiology, 13(2). 495-505. doi:10.1111/j.1462-2920.2010.02353.x

Stief, P, Behrendt, A, Lavik, G and de Beer, D (2010) Combined Gel Probe and Isotope Labeling Technique for Measuring Dissimilatory Nitrate Reduction to Ammonium in Sediments at Millimeter-Level Resolution. Applied and Environmental Microbiology, 76(18). 6239-6247. doi:10.1128/AEM.01104-10

Jogler, C, Niebler, M, Lin, W, Kube, M, Wanner, G, Kolinko, S, Stief, P, Beck, AJ, de Beer, D, Petersen, N, Pan, Y, Amann, R, Reinhardt, R and Schüller, D (2010) Cultivation-independent characterization of 'Candidatus Magnetobacterium bavaricum' via ultrastructural, goechemical, ecological and metagenomic methods. Environmental Microbiology, 12(9). 2466-2478. doi:10.1111/j.1462-2920.2010.02220.x

Schwermer, CU, Ferdelman, TG, Stief, P, Gieseke, A, Rezakhani, N, van Rijn, J, de Beer, D and Schramm, A (2010) Effect of nitrate on sulfur transformations in sulfidogenic sludge of a marine aquaculture biofilter. FEMS Microbiology Ecology, 72(3). 476-484. doi:10.1111/j.1574-6941.2010.00865.x

Lichtschlag, A, Felden, J, Brüchert, V, Boetius, A and de Beer, D (2010) Geochemical processes and chemosynthetic primary production in different thiotrophic mats of the Hakon Mosby Mud Volcano (Barents Sea). Limnology and Oceanography, 55(2). 931-949. doi:10.4319/lo.2010.55.2.0931 PANGAEA Supplementary Data

Lichtschlag, A, Felden, J, Wenzhöfer, F, Schubotz, F, Ertefai, TF, Boetius, A and de Beer, D (2010) Methane and sulfide fluxes in permanent anoxia: In situ studies at the Dvurechenskii mud volcano (Sorokin Trough, Black Sea). Geochimica et Cosmochimica Acta, 74(17). 5002-5018. doi:10.1016/j.gca.2010.05.031

Grünke, S, Lichtschlag, A, de Beer, D, Kuypers, MMM, Lösekann-Behrens, T, Ramette, A and Boetius, A (2010) Novel observations of Thiobacterium, a sulfur-storing Gammaproteobacterium producing gelatinous mats. Isme Journal, 4(8). 1031-1043. doi:10.1038/ismej.2010.23

Duperron, S, de Beer, D, Zbinden, M, Boetius, A, Schipani, V, Kahil, N and Gaill, F (2009) Molecular characterization of bacteria associated with the trophosome and the tube of Lamellibrachia sp., a siboglinid annelid from cold seeps in the eastern Mediterranean. FEMS Microbiology Ecology, 63(3). 395-409. doi:10.1111/j.1574-6941.2009.00724.x

de Deckker, P, Abed, RMM, de Beer, D, Hinrichs, KU, O'Loingsigh, T, Schefuß, E, Stuut, JB, Tapper, NJ and van der Kaars, S (2008) Geochemical and microbiological fingerprinting of airborne dust that fell in Canberra, Australia, in October 2002. Geochemistry Geophysics Geosystems, 9. Q12Q10. doi:10.1029/2008GC002091

Niemann, H, Lösekann, T, de Beer, D, Elvert, M, Nadalig, T, Knittel, K, Amann, R, Sauter, EJ, Schlüter, M, Klages, M, Foucher, JP and Boetius, A (2006) Novel microbial communities of the Haakon Mosby mud volcano and their role as a methane sink. Nature, 443(5227). 854-858. doi:10.1038/nature05227

Book Section

Schutte, CA, Ahmerkamp, S, Wu, CS, Seidel, M, de Beer, D, Cook, PLM and Joye, SB (2019) Biogeochemical dynamics of coastal tidal flats. In: Perillo, GME, Wolanski, E, Cahoon, DR and Hopkinson, CS (eds.) Coastal Wetlands. Elsevier, 407-440. doi:10.1016/B978-0-444-63893-9.00012-5

This list was generated on Sat Jul 24 09:36:57 2021 CEST.