Items where Author is "Schweder, Thomas"

Article

Beidler, I, Steinke, N, Schulze, T, Sidhu, C, Bartosik, D, Zühlke, MK, Martin, LT, Krull, J, Dutschei, T, Ferrero-Bordera, B, Rielicke, J, Kale, V, Sura, T, Trautwein-Schult, A, Kirstein, IV, Wiltshire, KH, Teeling, H, Becher, D, Bengtsson, MM, Hehemann, JH, Bornscheuer, UT, Amann, RI and Schweder, T (2024) Alpha-glucans from bacterial necromass indicate an intra-population loop within the marine carbon cycle. Nature Communications, 15(1). doi:10.1038/s41467-024-48301-5

Dutschei, T, Beidler, I, Bartosik, D, Seeßelberg, JM, Teune, M, Bäumgen, M, Ferreira, SQ, Heldmann, J, Nagel, F, Krull, J, Berndt, L, Methling, K, Hein, M, Becher, D, Langer, P, Delcea, M, Lalk, M, Lammers, M, Höhne, M, Hehemann, JH, Schweder, T and Bornscheuer, UT (2023) Marine Bacteroidetes enzymatically digest xylans from terrestrial plants. Environmental Microbiology. doi:10.1111/1462-2920.16390

Sidhu, C, Kirstein, IV, Meunier, CL, Rick, J, Fofonova, V, Wiltshire, KH, Steinke, N, Vidal-Melgosa, S, Hehemann, JH, Huettel, B, Schweder, T, Fuchs, BM, Amann, RI and Teeling, H (2023) Dissolved storage glycans shaped the community composition of abundant bacterioplankton clades during a North Sea spring phytoplankton bloom. Microbiome, 11(1). doi:10.1186/s40168-023-01517-x

Beidler, I, Robb, CS, Vidal-Melgosa, S, Zühlke, MK, Bartosik, D, Solanki, V, Markert, S, Becher, D, Schweder, T and Hehemann, JH (2023) Marine bacteroidetes use a conserved enzymatic cascade to digest diatom β-mannan. The ISME Journal, 17(2). 276-285. doi:10.1038/s41396-022-01342-4

Pudlo, NA, Pereira, GV, Parnami, J, Cid, M, Markert, S, Tingley, JP, Unfried, F, Ali, A, Varghese, NJ, Kim, KS, Campbell, A, Urs, K, Xiao, Y, Adams, R, Martin, D, Bolam, DN, Becher, D, Eloe-Fadrosh, EA, Schmidt, TM, Abbott, DW, Schweder, T, Hehemann, JH and Martens, EC (2022) Diverse events have transferred genes for edible seaweed digestion from marine to human gut bacteria. Cell Host & Microbe, 30(3). 314-328.e11. doi:10.1016/j.chom.2022.02.001

Dutschei, T, Zühlke, MK, Welsch, N, Eisenack, T, Hilkmann, M, Krull, J, Stühle, C, Brott, S, Dürwald, A, Reisky, L, Hehemann, JH, Becher, D, Schweder, T and Bornscheuer, UT (2022) Metabolic engineering enables Bacillus licheniformis to grow on the marine polysaccharide ulvan. Microbial Cell Factories, 21(1). doi:10.1186/s12934-022-01931-0

Francis, TB, Bartosik, D, Sura, T, Sichert, A, Hehemann, JH, Markert, S, Schweder, T, Fuchs, BM, Teeling, H, Amann, RI and Becher, D (2021) Changing expression patterns of TonB-dependent transporters suggest shifts in polysaccharide consumption over the course of a spring phytoplankton bloom. The ISME Journal. doi:10.1038/s41396-021-00928-8

Vidal-Melgosa, S, Sichert, A, Francis, TB, Bartosik, D, Niggemann, J, Wichels, A, Willats, WGT, Fuchs, BM, Teeling, H, Becher, D, Schweder, T, Amann, R and Hehemann, JH (2021) Diatom fucan polysaccharide precipitates carbon during algal blooms. Nature Communications, 12(1). doi:10.1038/s41467-021-21009-6

Bäumgen, M, Dutschei, T, Bartosik, D, Suster, C, Reisky, L, Gerlach, N, Stanetty, C, Mihovilovic, MD, Schweder, T, Hehemann, JH and Bornscheuer, UT (2021) A new carbohydrate-active oligosaccharide dehydratase is involved in the degradation of ulvan. Journal of Biological Chemistry, 297(4). 101210. doi:10.1016/j.jbc.2021.101210

Sichert, A, Corzett, CH, Schechter, MS, Unfried, F, Markert, S, Becher, D, Fernandez-Guerra, A, Liebeke, M, Schweder, T, Polz, MF and Hehemann, JH (2020) Verrucomicrobia use hundreds of enzymes to digest the algal polysaccharide fucoidan. Nature Microbiology. doi:10.1038/s41564-020-0720-2

Koch, H, Dürwald, A, Schweder, T, Noriega-Ortega, B, Vidal-Melgosa, S, Hehemann, JH, Dittmar, T, Freese, HM, Becher, D, Simon, M and Wietz, M (2019) Biphasic cellular adaptations and ecological implications of Alteromonas macleodii degrading a mixture of algal polysaccharides. The ISME Journal, 13(1). 92-103. doi:10.1038/s41396-018-0252-4

Meier, DV, Pjevac, P, Bach, W, Markert, S, Schweder, T, Jamieson, J, Petersen, S, Amann, R and Meyerdierks, A (2019) Microbial metal-sulfide oxidation in inactive hydrothermal vent chimneys suggested by metagenomic and metaproteomic analyses. Environmental Microbiology, 21(2). 682-701. doi:10.1111/1462-2920.14514

Kappelmann, L, Krüger, K, Hehemann, JH, Harder, J, Markert, S, Unfried, F, Becher, D, Shapiro, N, Schweder, T, Amann, RI and Teeling, H (2019) Polysaccharide utilization loci of North Sea Flavobacteriia as basis for using SusC/D-protein expression for predicting major phytoplankton glycans. The ISME Journal, 13(1). 76-91. doi:10.1038/s41396-018-0242-6

Reisky, L, Préchoux, A, Zühlke, MK, Bäumgen, M, Robb, CS, Gerlach, N, Roret, T, Stanetty, C, Larocque, R, Michel, G, Song, T, Markert, S, Unfried, F, Mihovilovic, MD, Trautwein-Schult, A, Becher, D, Schweder, T, Bornscheuer, UT and Hehemann, JH (2019) A marine bacterial enzymatic cascade degrades the algal polysaccharide ulvan. Nature Chemical Biology, 15(8). 803-812. doi:10.1038/s41589-019-0311-9

Unfried, F, Becker, S, Robb, CS, Hehemann, JH, Markert, S, Heiden, SE, Hinzke, T, Becher, D, Reintjes, G, Krüger, K, Avci, B, Kappelmann, L, Hahnke, RL, Fischer, T, Harder, J, Teeling, H, Fuchs, B, Barbeyron, T, Amann, RI and Schweder, T (2018) Adaptive mechanisms that provide competitive advantages to marine bacteroidetes during microalgal blooms. The ISME Journal, 12(12). 2894-2906. doi:10.1038/s41396-018-0243-5

Chen, J, Robb, CS, Unfried, F, Kappelmann, L, Markert, S, Song, T, Harder, J, Avci, B, Becher, D, Xie, P, Amann, RI, Hehemann, JH, Schweder, T and Teeling, H (2018) Alpha- and beta-mannan utilization by marine Bacteroidetes. Environmental Microbiology, 20(11). 4127-4140. doi:10.1111/1462-2920.14414

Reisky, L, Stanetty, C, Mihovilovic, MD, Schweder, T, Hehemann, JH and Bornscheuer, UT (2018) Biochemical characterization of an ulvan lyase from the marine flavobacterium Formosa agariphila KMM 3901T. Applied Microbiology and Biotechnology, 102(16). 6987-6996. doi:10.1007/s00253-018-9142-y

Pjevac, P, Meier, DV, Markert, S, Hentschker, C, Schweder, T, Becher, D, Gruber-Vodicka, HR, Richter, M, Bach, W, Amann, R and Meyerdierks, A (2018) Metaproteogenomic profiling of microbial communities colonizing actively venting hydrothermal chimneys. Frontiers in Microbiology, 9. doi:10.3389/fmicb.2018.00680

Reisky, L, Büchsenschütz, HC, Engel, J, Song, T, Schweder, T, Hehemann, JH and Bornscheuer, UT (2018) Oxidative demethylation of algal carbohydrates by cytochrome P450 monooxygenases. Nature Chemical Biology, 14(4). 342-344. doi:10.1038/s41589-018-0005-8

Hehemann, JH, Truong, LV, Unfried, F, Welsch, N, Kabisch, J, Heiden, SE, Junker, S, Becher, D, Thürmer, A, Daniel, R, Amann, R and Schweder, T (2017) Aquatic adaptation of a laterally acquired pectin degradation pathway in marine gammaproteobacteria. Environmental Microbiology, 19(6). 2320-2333. doi:10.1111/1462-2920.13726

Badur, AH, Plutz, MJ, Yalamanchili, G, Jagtap, SS, Schweder, T, Unfried, F, Markert, S, Polz, MF, Hehemann, JH and Rao, CV (2017) Exploiting fine-scale genetic and physiological variation of closely related microbes to reveal unknown enzyme functions. Journal of Biological Chemistry, 292(31). 13056-13067. doi:10.1074/jbc.M117.787192

Ponnudurai, R, Kleiner, M, Sayavedra, L, Petersen, JM, Moche, M, Otto, A, Becher, D, Takeuchi, T, Satoh, N, Dubilier, N, Schweder, T and Markert, S (2017) Metabolic and physiological interdependencies in the Bathymodiolus azoricus symbiosis. The ISME Journal, 11(2). 463-477. doi:10.1038/ismej.2016.124

Sayavedra, L, Kleiner, M, Ponnudurai, R, Wetzel, S, Pelletier, E, Barbe, V, Satoh, N, Shoguchi, E, Fink, D, Breusing, C, Reusch, TBH, Rosenstiel, P, Schilhabel, MB, Becher, D, Schweder, T, Markert, S, Dubilier, N and Petersen, JM (2015) Abundant toxin-related genes in the genomes of beneficial symbionts from deep-sea hydrothermal vent mussels. eLife, 4. doi:10.7554/eLife.07966

Xing, P, Hahnke, RL, Unfried, F, Markert, S, Huang, S, Barbeyron, T, Harder, J, Becher, D, Schweder, T, Glöckner, FO, Amann, RI and Teeling, H (2015) Niches of two polysaccharide-degrading Polaribacter isolates from the North Sea during a spring diatom bloom. The ISME Journal, 9(6). 1410-1422. doi:10.1038/ismej.2014.225