Items where Author is "Lipp, Julius S"

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Article

Zhu, QZ, Elvert, M, Meador, TB, Schröder, JM, Doeana, KD, Becker, KW, Elling, FJ, Lipp, JS, Heuer, VB, Zabel, M and Hinrichs, KU (2024) Comprehensive molecular‐isotopic characterization of archaeal lipids in the Black Sea water column and underlying sediments. Geobiology, 22(2). doi:10.1111/gbi.12589

Benito Merino, D, Lipp, JS, Borrel, G, Boetius, A and Wegener, G (2024) Anaerobic hexadecane degradation by a thermophilic Hadarchaeon from Guaymas Basin. The ISME Journal, 18(1). doi:10.1093/ismejo/wrad004

Zehnle, H, Laso-Pérez, R, Lipp, JS, Riedel, D, Benito Merino, D, Teske, A and Wegener, G (2023) Candidatus Alkanophaga archaea from Guaymas Basin hydrothermal vent sediment oxidize petroleum alkanes. Nature Microbiology, 8(7). 1199-1212. doi:10.1038/s41564-023-01400-3

Aharonovich, S, Lipp, JS and George, SC (2023) Global sea level changes or local tectonics? Pliocene, Miocene and Oligocene biomarkers in cored sedimentary rocks from IODP Expedition 317, Canterbury Basin, New Zealand. Organic Geochemistry, 180. 104590. doi:10.1016/j.orggeochem.2023.104590

Coffinet, S, Mühlena, L, Lipp, JS, Weil, M, Neubauer, C, Urich, T and Hinrichs, KU (2022) Evidence for enzymatic backbone methylation of the main membrane lipids in the archaeon Methanomassiliicoccus luminyensis. Applied and Environmental Microbiology, 88(4). e02154-21. doi:10.1128/aem.02154-21

Liu, W, Alfken, S, Wörmer, L, Lipp, JS and Hinrichs, KU (2022) Hidden molecular clues in marine sediments revealed by untargeted mass spectrometry imaging. Frontiers in Earth Science, 10. doi:10.3389/feart.2022.931157

Tourte, M, Coffinet, S, Wörmer, L, Lipp, JS, Hinrichs, KU and Oger, PM (2022) The exploration of the Thermococcus barophilus lipidome reveals the widest variety of phosphoglycolipids in Thermococcales. Frontiers in Microbiology, 13. 869479. doi:10.3389/fmicb.2022.869479

Alfken, S, Wörmer, L, Lipp, JS, Napier, T, Elvert, M, Wendt, J, Schimmelmann, A and Hinrichs, KU (2021) Disrupted coherence between upwelling strength and redox conditions reflects source water change in Santa Barbara Basin during the 20th century. Paleoceanography and Paleoclimatology, 36(12). doi:10.1029/2021PA004354

Ma, C, Coffinet, S, Lipp, JS, Hinrichs, KU and Zhang, C (2020) Marine Group II Euryarchaeota contribute to the archaeal lipid pool in Northwestern Pacific Ocean surface waters. Frontiers in Microbiology, 11. doi:10.3389/fmicb.2020.01034

Alfken, S, Wörmer, L, Lipp, JS, Wendt, J, Schimmelmann, A and Hinrichs, KU (2020) Mechanistic insights into molecular proxies through comparison of subannually resolved sedimentary records with instrumental water column data in the Santa Barbara Basin, Southern California. Paleoceanography and Paleoclimatology, 35(10). doi:10.1029/2020PA004076

Coffinet, S, Meador, TB, Mühlena, L, Becker, KW, Schröder, J, Zhu, QZ, Lipp, JS, Heuer, VB, Crump, MP and Hinrichs, KU (2020) Structural elucidation and environmental distributions of butanetriol and pentanetriol dialkyl glycerol tetraethers (BDGTs and PDGTs). Biogeosciences, 17(2). 317-330. doi:10.5194/bg-17-317-2020

Evans, TW, Coffinet, S, Könneke, M, Lipp, JS, Becker, KW, Elvert, M, Heuer, V and Hinrichs, KU (2019) Assessing the carbon assimilation and production of benthic archaeal lipid biomarkers using lipid-RIP. Geochimica et Cosmochimica Acta, 265. 431-442. doi:10.1016/j.gca.2019.08.030

Versteegh, GJM and Lipp, JS (2019) Detection of new long-chain mid-chain keto-ol isomers from marine sediments by means of HPLC–APCI-MS and comparison with long-chain mid-chain diols from the same samples. Organic Geochemistry, 133. 92-102. doi:10.1016/j.orggeochem.2019.04.004

Alfken, S, Wörmer, L, Lipp, JS, Wendt, J, Taubner, H, Schimmelmann, A and Hinrichs, KU (2019) Micrometer scale imaging of sedimentary climate archives – Sample preparation for combined elemental and lipid biomarker analysis. Organic Geochemistry, 127. 81-91. doi:10.1016/j.orggeochem.2018.11.002

Hurley, SJ, Lipp, JS, Close, HG, Hinrichs, KU and Pearson, A (2018) Distribution and export of isoprenoid tetraether lipids in suspended particulate matter from the water column of the Western Atlantic Ocean. Organic Geochemistry, 116. 90-102. doi:10.1016/j.orggeochem.2017.11.010 PANGAEA Supplementary Data

Schubotz, F, Xie, S, Lipp, JS, Hinrichs, KU and Wakeham, SG (2018) Intact polar lipids in the water column of the eastern tropical North Pacific: abundance and structural variety of non-phosphorus lipids. Biogeosciences, 15(21). 6481-6501. doi:10.5194/bg-15-6481-2018

Becker, KW, Elling, FJ, Schröder, JM, Lipp, JS, Goldhammer, T, Zabel, M, Elvert, M, Overmann, J and Hinrichs, KU (2018) Isoprenoid quinones resolve the stratification of redox processes in a biogeochemical continuum from the photic zone to deep anoxic sediments of the Black Sea. Applied and Environmental Microbiology, 84(10). e02736-17. doi:10.1128/AEM.02736-17 PANGAEA Supplementary Data

Evans, TW, Könneke, M, Lipp, JS, Adhikari, RR, Taubner, H, Elvert, M and Hinrichs, KU (2018) Lipid biosynthesis of Nitrosopumilus maritimus dissected by lipid specific radioisotope probing (lipid-RIP) under contrasting ammonium supply. Geochimica et Cosmochimica Acta, 242. 51-63. doi:10.1016/j.gca.2018.09.001 PANGAEA Supplementary Data

Liu, XL, Lipp, JS, Birgel, D, Summons, RE and Hinrichs, KU (2018) Predominance of parallel glycerol arrangement in archaeal tetraethers from marine sediments: Structural features revealed from degradation products. Organic Geochemistry, 115. 12-23. doi:10.1016/j.orggeochem.2017.09.009

Evans, TW, Wörmer, L, Lever, MA, Lipp, JS, Lagostina, L, Lin, YS, Jørgensen, BB and Hinrichs, KU (2017) Size and composition of subseafloor microbial community in the Benguela upwelling area examined from intact membrane lipid and DNA analysis. Organic Geochemistry, 111. 86-100. doi:10.1016/j.orggeochem.2017.06.008

Liu, XL, Birgel, D, Elling, FJ, Sutton, PA, Lipp, JS, Zhu, R, Zhang, C, Könneke, M, Peckmann, JL, Rowland, SJ, Summons, RE and Hinrichs, KU (2016) From ether to acid: A plausible degradation pathway of glycerol dialkyl glycerol tetraethers. Geochimica et Cosmochimica Acta, 183. 138-152. doi:10.1016/j.gca.2016.04.016

Dowell, F, Cardman, Z, Dasarathy, S, Kellermann, MY, Lipp, JS, Ruff, SE, Biddle, JF, McKay, LJ, MacGregor, BJ, Lloyd, KG, Albert, DB, Mendlovitz, H, Hinrichs, KU and Teske, A (2016) Microbial communities in methane- and short chain alkane-rich hydrothermal sediments of Guaymas Basin. Frontiers in Microbiology, 7. doi:10.3389/fmicb.2016.00017

Becker, KW, Lipp, JS, Versteegh, GJM, Wörmer, L and Hinrichs, KU (2015) Rapid and simultaneous analysis of three molecular sea surface temperature proxies and application to sediments from the Sea of Marmara. Organic Geochemistry, 85. 42-53. doi:10.1016/j.orggeochem.2015.04.008 PANGAEA Supplementary Data

Elling, FJ, Könneke, M, Lipp, JS, Becker, KW, Gagen, EJ and Hinrichs, KU (2014) Effects of growth phase on the membrane lipid composition of the thaumarchaeon Nitrosopumilus maritimus and their implications for archaeal lipid distributions in the marine environment. Geochimica et Cosmochimica Acta, 141. 579-597. doi:10.1016/j.gca.2014.07.005

Ciobanu, MC, Burgaud, G, Dufresne, A, Breuker, A, Rédou, V, Ben Maamar, S, Gaboyer, F, Vandenabeele-Trambouze, O, Lipp, JS, Schippers, A, Vandenkoornhuyse, P, Barbier, G, Jebbar, M, Godfroy, A and Alain, K (2014) Microorganisms persist at record depths in the subseafloor of the Canterbury Basin. The ISME Journal, 8(7). 1370-1380. doi:10.1038/ismej.2013.250

Zhu, R, Lin, YS, Lipp, JS, Meador, TB and Hinrichs, KU (2014) Optimizing sample pretreatment for compound-specific stable carbon isotopic analysis of amino sugars in marine sediment. Biogeosciences, 11(17). 4869-4880. doi:10.5194/bg-11-4869-2014

Imachi, H, Sakai, S, Lipp, JS, Miyazaki, M, Saito, Y, Yamanaka, Y, Hinrichs, KU, Inagaki, F and Takai, K (2014) Pelolinea submarina gen. nov., sp. nov., an anaerobic, filamentous bacterium of the phylum Chloroflexi isolated from subseafloor sediment. International Journal of Systematic and Evolutionary Microbiology, 64(Pt 3). 812-818. doi:10.1099/ijs.0.057547-0

Wörmer, L, Elvert, M, Fuchser, J, Lipp, JS, Buttigieg, PL, Zabel, M and Hinrichs, KU (2014) Ultra-high-resolution paleoenvironmental records via direct laser-based analysis of lipid biomarkers in sediment core samples. Proceedings of the National Academy of Sciences of the United States of America, 111(44). 15669-15674. doi:10.1073/pnas.1405237111 PANGAEA Supplementary Data

Wörmer, L, Lipp, JS, Schröder, JM and Hinrichs, KU (2013) Application of two new LC–ESI–MS methods for improved detection of intact polar lipids (IPLs) in environmental samples. Organic Geochemistry, 59. 10-21. doi:10.1016/j.orggeochem.2013.03.004

Lin, YS, Lipp, JS, Elvert, M, Holler, T and Hinrichs, KU (2013) Assessing production of the ubiquitous archaeal diglycosyl tetraether lipids in marine subsurface sediment using intramolecular stable isotope probing. Environmental Microbiology, 15(5). 1634-1646. doi:10.1111/j.1462-2920.2012.02888.x

Zhu, C, Lipp, JS, Wörmer, L, Becker, KW, Schröder, J and Hinrichs, KU (2013) Comprehensive glycerol ether lipid fingerprints through a novel reversed phase liquid chromatography–mass spectrometry protocol. Organic Geochemistry, 65. 53-62. doi:10.1016/j.orggeochem.2013.09.012

Xie, S, Lipp, JS, Wegener, G, Ferdelman, TG and Hinrichs, KU (2013) Turnover of microbial lipids in the deep biosphere and growth of benthic archaeal populations. PNAS, 110(15). 6010-6014. doi:10.1073/pnas.1218569110 PANGAEA Supplementary Data

Becker, KW, Lipp, JS, Zhu, C, Liu, XL and Hinrichs, KU (2013) An improved method for the analysis of archaeal and bacterial ether core lipids. Organic Geochemistry, 61. 34-44. doi:10.1016/j.orggeochem.2013.05.007

Schouten, S, Hopmans, EC, Rosell-Melé, A, Pearson, A, Adam, P, Bauersachs, T, Bard, E, Bernasconi, SM, Bianchi, TS, Brocks, JJ, Carlson, LT, Castañeda, IS, Derenne, S, Selver, AD, Dutta, K, Eglinton, TI, Fosse, C, Galy, V, Grice, K, Hinrichs, KU, Huang, Y, Huguet, A, Huguet, C, Hurley, S, Ingalls, A, Jia, G, Keely, B, Knappy, C, Kondo, M, Krishnan, S, Lincoln, S, Lipp, JS, Mangelsdorf, K, Martinez-Garcia, A, Ménot, G, Mets, A, Mollenhauer, G, Ohkouchi, N, Ossebaar, J, Pagani, M, Pancost, RD, Pearson, EJ, Peterse, F, Reichart, GJ, Schaeffer, P, Schmitt, G, Schwark, L, Shah, SR, Smith, RW, Smittenberg, RH, Summons, RE, Takano, Y, Talbot, HM, Taylor, KWR, Tarozo, R, Uchida, M, van Dongen, BE, Van Mooy, BAS, Wang, J, Warren, C, Weijers, JWH, Werne, JP, Woltering, M, Xie, S, Yamamoto, M, Yang, H, Zhang, CL, Zhang, Y, Zhao, M and Damsté, JSS (2013) An interlaboratory study of TEX86and BIT analysis of sediments, extracts, and standard mixtures. Geochemistry, Geophysics, Geosystems, 14(12). 5263-5285. doi:10.1002/2013GC004904

Liu, XL, Lipp, JS, Schröder, JM, Summons, RE and Hinrichs, KU (2012) Isoprenoid glycerol dialkanol diethers: A series of novel archaeal lipids in marine sediments. Organic Geochemistry, 43. 50-55. doi:10.1016/j.orggeochem.2011.11.002

Bühring, S, Schubotz, F, Harms, C, Lipp, JS, Amils, R and Hinrichs, KU (2012) Lipid signatures of acidophilic microbial communities in an extreme, acidic environment: Río Tinto, Spain. Organic Geochemistry, 47. 66-77. doi:10.1016/j.orggeochem.2012.03.010

Liu, XL, Lipp, JS, Simpson, JH, Lin, YS, Summons, RE and Hinrichs, KU (2012) Mono- and dihydroxyl glycerol dibiphytanyl glycerol tetraethers in marine sediments: Identification of both core and intact polar lipid forms. Geochimica et Cosmochimica Acta, 89. 102-115. doi:10.1016/j.gca.2012.04.053 PANGAEA Supplementary Data

McKay, LJ, MacGregor, BJ, Biddle, JF, Albert, DB, Mendlovitz, HP, Hoer, DR, Lipp, JS, Lloyd, KG and Teske, AP (2012) Spatial heterogeneity and underlying geochemistry of phylogenetically diverse orange and white Beggiatoa mats in Guaymas Basin hydrothermal sediments. Deep Sea Research Part I: Oceanographic Research Papers, 67. 21-31. doi:10.1016/j.dsr.2012.04.011

Kellermann, MY, Schubotz, F, Elvert, M, Lipp, JS, Birgel, D, Prieto-Mollar, X, Dubilier, N and Hinrichs, KU (2012) Symbiont-host relationships in chemosynthetic mussels: A comprehensive lipid biomarker study. Organic Geochemistry, 43(1). 112-124. doi:10.1016/j.orggeochem.2011.10.005

Liu, XL, Lipp, JS and Hinrichs, KU (2011) Distribution of intact and core GDGTs in marine sediments. Organic Geochemistry, 42(4). 368-375. doi:10.1016/j.orggeochem.2011.02.003

Schubotz, F, Lipp, JS, Elvert, M, Kasten, S, Mollar, XP, Zabel, M, Bohrmann, G and Hinrichs, KU (2011) Petroleum degradation and associated microbial signatures at the Chapopote asphalt volcano, Southern Gulf of Mexico. Geochimica et Cosmochimica Acta, 75(16). 4377-4398. doi:10.1016/j.gca.2011.05.025

Schubotz, F, Lipp, JS, Elvert, M and Hinrichs, KU (2011) Stable carbon isotopic compositions of intact polar lipids reveal complex carbon flow patterns among hydrocarbon degrading microbial communities at the Chapopote asphalt volcano. Geochimica et Cosmochimica Acta, 75(16). 4399-4415. doi:10.1016/j.gca.2011.05.018

Yoshinaga, MY, Kellermann, MY, Rossel, PE, Schubotz, F, Lipp, JS and Hinrichs, KU (2011) Systematic fragmentation patterns of archaeal intact polar lipids by high-performance liquid chromatography/electrospray ionization ion-trap mass spectrometry. Rapid Communications in Mass Spectrometry, 25. 3563-3574. doi:10.1002/rcm.5251

Lin, YS, Biddle, JF, Lipp, JS, Orcutt, B, Holler, T, Teske, AP and Hinrichs, KU (2010) Effect of storage conditions on archaeal and bacterial communities in subsurface marine sediments. Geomicrobiology Journal, 27. 261-272. doi:10.1080/01490450903410423 PANGAEA Supplementary Data

Lin, YS, Lipp, JS, Yoshinaga, MY, Lin, SH, Elvert, M and Hinrichs, KU (2010) Intramolecular stable carbon isotopic analysis of archaeal glycosyl tetraether lipids. Rapid Communications in Mass Spectrometry, 24(19). 2817-2826. doi:10.1002/rcm.4707 PANGAEA Supplementary Data

Schubotz, F, Wakeham, SG, Lipp, JS, Fredricks, HF and Hinrichs, KU (2009) Detection of microbial biomass by intact polar membrane lipid analysis in the water column and surface sediments of the Black Sea. Environmental Microbiology, 11(10). 2720-2734. doi:10.1111/j.1462-2920.2009.01999.x

Lipp, JS and Hinrichs, KU (2009) Structural diversity and fate of intact polar lipids in marine sediments. Geochimica et Cosmochimica Acta, 73(22). 6816-6833. doi:10.1016/j.gca.2009.08.003 PANGAEA Supplementary Data

Bühring, S, Smittenberg, RH, Sachse, D, Lipp, JS, Golubic, S, Sachs, JP, Hinrichs, KU and Summons, RE (2009) A hypersaline microbial mat from the Pacific Atoll Kiritimati: Insight into composition and carbon fixation using biomarker analyses and a 13C-labeling approach. Geobiology, 7(3). 308 - 323. doi:10.1111/j.1472-4669.2009.00198.x PANGAEA Supplementary Data

Rossel, PE, Lipp, JS, Fredricks, HF, Arnds, J, Boetius, A, Elvert, M and Hinrichs, KU (2008) Intact polar lipids of anaerobic methanotrophic archaea and associated bacteria. Organic Geochemistry, 39(8). 992-999. doi:10.1016/j.orggeochem.2008.02.021

Strapoc, D, Picardal, FW, Turich, C, Schaperdoth, I, Macalady, JL, Lipp, JS, Lin, YS, Ertefai, TF, Schubotz, F, Hinrichs, KU, Mastalerz, M and Schimmelmann, A (2008) Methane-Producing Microbial Community in a Coal Bed of the Illinois Basin. Applied and Environmental Microbiology, 74. 2424-2432. doi:10.1128/AEM.02341-07

Lipp, JS, Morono, Y, Inagaki, F and Hinrichs, KU (2008) Significant contribution of Archaea to extant biomass in marine subsurface sediments. Nature, 454(t207). 991-994. doi:10.1038/nature07174 PANGAEA Supplementary Data

Ertefai, TF, Fisher, MC, Fredricks, HF, Lipp, JS, Birgel, D, Udert, KM, Cavanaugh, CM, Pearson, A, Gschwend, PM and Hinrichs, KU (2008) Vertical distribution of microbial lipids and functional genes in chemically distinct layers of a highly polluted meromictic lake. Organic Geochemistry, 39(11). 1572-1588. doi:10.1016/j.orggeochem.2008.07.009

Biddle, JF, Lipp, JS, Lever, MA, Lloyd, K, Sorensen, KB, Anderson, R, Fredricks, HF, Elvert, M, Kelly, TJ, Schrag, DP, Sogin, ML, Brenchley, JE, Teske, AP, House, CH and Hinrichs, KU (2006) Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru. Proceedings of the National Academy of Sciences, 103(10). 3846-3851. doi:10.1073/pnas.0600035103

Thesis

Lipp, JS (2008) Intact membrane lipids as tracers for microbial life in the marine deep biosphere. PhD thesis, Elektronische Dissertationen an der Staats- und Universitätsbibliothek Bremen, Germany. urn:nbn:de:gbv:46-diss000110109

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