Items where Author is "Hinrichs, Kai-Uwe"

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Number of items: 193.

Article

Chuang, PC, Dale, AW, Heuer, VB, Hinrichs, KU and Zabel, M (2021) Coupling of dissolved organic carbon, sulfur and iron cycling in Black Sea sediments over the Holocene and the late Pleistocene: Insights from an empirical dynamic model. Geochimica et Cosmochimica Acta, 307. 302-318. doi:10.1016/j.gca.2021.04.032

Sherwood Lollar, B, Heuer, VB, McDermott, J, Tille, S, Warr, O, Moran, JJ, Telling, J and Hinrichs, KU (2021) A window into the abiotic carbon cycle – Acetate and formate in fracture waters in 2.7 billion year-old host rocks of the Canadian Shield. Geochimica et Cosmochimica Acta, 294. 295-314. doi:10.1016/j.gca.2020.11.026

Steen, AD, Kusch, S, Abdulla, HA, Cakić, N, Coffinet, S, Dittmar, T, Fulton, JM, Galy, V, Hinrichs, KU, Ingalls, AE, Koch, BP, Kujawinski, E, Liu, Z, Osterholz, H, Rush, D, Seidel, M, Sepúlveda, J and Wakeham, SG (2020) Analytical and computational advances, opportunities, and challenges in marine organic biogeochemistry in an Era of “Omics”. Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00718

Aiello, IW, Beaufort, L, Goldhammer, T, Heuer, VB, Hinrichs, KU and Zabel, M (2020) Anatomy of a ‘suspended’ seafloor in the dense brine waters of the deep hypersaline Urania Basin. Deep Sea Research Part II: Topical Studies in Oceanography, 171. 104626. doi:10.1016/j.dsr2.2019.07.014

Gutiérrez, MH, Vera, J, Srain, B, Quiñones, RA, Wörmer, L, Hinrichs, KU and Pantoja-Gutiérrez, S (2020) Biochemical fingerprints of marine fungi: implications for trophic and biogeochemical studies. Aquatic Microbial Ecology, 84. 75-90. doi:10.3354/ame01927

Ding, S, Lange, M, Lipp, J, Schwab, VF, Chowdhury, S, Pollierer, MM, Krause, K, Li, D, Kothe, E, Scheu, S, Welti, R, Hinrichs, KU and Gleixner, G (2020) Characteristics and origin of intact polar lipids in soil organic matter. Soil Biology and Biochemistry, 151. 108045. doi:10.1016/j.soilbio.2020.108045

Aromokeye, DA, Oni, OE, Tebben, J, Yin, X, Richter-Heitmann, T, Wendt, J, Nimzyk, R, Littmann, S, Tienken, D, Kulkarni, AC, Henkel, S, Hinrichs, KU, Elvert, M, Harder, T, Kasten, S and Friedrich, MW (2020) Crystalline iron oxides stimulate methanogenic benzoate degradation in marine sediment-derived enrichment cultures. The ISME Journal. doi:10.1038/s41396-020-00824-7

Hoshino, T, Doi, H, Uramoto, GI, Wörmer, L, Adhikari, RR, Xiao, N, Morono, Y, D’Hondt, S, Hinrichs, KU and Inagaki, F (2020) Global diversity of microbial communities in marine sediment. Proceedings of the National Academy of Sciences, 117(44). 27587-27597. doi:10.1073/pnas.1919139117

Tsang, MY, Bowden, SA, Wang, Z, Mohammed, A, Tonai, S, Muirhead, D, Yang, K, Yamamoto, Y, Kamiya, N, Okutsu, N, Hirose, T, Kars, M, Schubotz, F, Ijiri, A, Yamada, Y, Kubo, Y, Morono, Y, Inagaki, F, Heuer, VB and Hinrichs, KU (2020) Hot fluids, burial metamorphism and thermal histories in the underthrust sediments at IODP 370 site C0023, Nankai Accretionary Complex. Marine and Petroleum Geology, 112. 104080. doi:10.1016/j.marpetgeo.2019.104080

Gan, S, Schmidt, F, Heuer, VB, Goldhammer, T, Witt, M and Hinrichs, KU (2020) Impacts of redox conditions on dissolved organic matter (DOM) quality in marine sediments off the River Rhône, Western Mediterranean Sea. Geochimica et Cosmochimica Acta, 276. 151-169. doi:10.1016/j.gca.2020.02.001

Becker, S, Tebben, J, Coffinet, S, Wiltshire, KH, Iversen, MH, Harder, T, Hinrichs, KU and Hehemann, JH (2020) Laminarin is a major molecule in the marine carbon cycle. Proceedings of the National Academy of Sciences, 117(12). 6599-6607. doi:10.1073/pnas.1917001117

Probst, AJ, Elling, FJ, Castelle, CJ, Zhu, Q, Elvert, M, Birarda, G, Holman, HYN, Lane, KR, Ladd, B, Ryan, MC, Woyke, T, Hinrichs, KU and Banfield, JF (2020) Lipid analysis of CO2-rich subsurface aquifers suggests an autotrophy-based deep biosphere with lysolipids enriched in CPR bacteria. The ISME Journal. doi:10.1038/s41396-020-0624-4

Ma, C, Coffinet, S, Lipp, JS, Hinrichs, KU and Zhang, C (2020) Marine Group II Euryarchaeota contribute to the archaeal lipid pool in Northwestern Pacific Ocean surface waters. Frontiers in Microbiology, 11. doi:10.3389/fmicb.2020.01034

Nigro, LM, Elling, FJ, Hinrichs, KU, Joye, SB and Teske, A (2020) Microbial ecology and biogeochemistry of hypersaline sediments in Orca Basin. PLOS ONE, 15(4). e0231676. doi:10.1371/Journal.pone.0231676

Aromokeye, DA, Kulkarni, AC, Elvert, M, Wegener, G, Henkel, S, Coffinet, S, Eickhorst, T, Oni, OE, Richter-Heitmann, T, Schnakenberg, A, Taubner, H, Wunder, L, Yin, X, Zhu, Q, Hinrichs, KU, Kasten, S and Friedrich, MW (2020) Rates and microbial players of iron-driven anaerobic oxidation of methane in methanic marine sediments. Frontiers in Microbiology, 10. doi:10.3389/fmicb.2019.03041

Coffinet, S, Meador, TB, Mühlena, L, Becker, KW, Schröder, J, Zhu, QZ, Lipp, JS, Heuer, VB, Crump, MP and Hinrichs, KU (2020) Structural elucidation and environmental distributions of butanetriol and pentanetriol dialkyl glycerol tetraethers (BDGTs and PDGTs). Biogeosciences, 17(2). 317-330. doi:10.5194/bg-17-317-2020

Heuer, VB, Inagaki, F, Morono, Y, Kubo, Y, Spivack, AJ, Viehweger, B, Treude, T, Beulig, F, Schubotz, F, Tonai, S, Bowden, SA, Cramm, M, Henkel, S, Hirose, T, Homola, K, Hoshino, T, Ijiri, A, Imachi, H, Kamiya, N, Kaneko, M, Lagostina, L, Manners, H, McClelland, HL, Metcalfe, K, Okutsu, N, Pan, D, Raudsepp, MJ, Sauvage, J, Tsang, MY, Wang, DT, Whitaker, E, Yamamoto, Y, Yang, K, Maeda, L, Adhikari, RR, Glombitza, C, Hamada, Y, Kallmeyer, J, Wendt, J, Wörmer, L, Yamada, Y, Kinoshita, M and Hinrichs, KU (2020) Temperature limits to deep subseafloor life in the Nankai Trough subduction zone. Science, 370(6521). 1230-1234. doi:10.1126/science.abd7934

Obreht, I, Wörmer, L, Brauer, A, Wendt, J, Alfken, S, De Vleeschouwer, D, Elvert, M and Hinrichs, KU (2020) An annually resolved record of Western European vegetation response to Younger Dryas cooling. Quaternary Science Reviews, 231. 106198. doi:10.1016/j.quascirev.2020.106198

Evans, TW, Coffinet, S, Könneke, M, Lipp, JS, Becker, KW, Elvert, M, Heuer, V and Hinrichs, KU (2019) Assessing the carbon assimilation and production of benthic archaeal lipid biomarkers using lipid-RIP. Geochimica et Cosmochimica Acta, 265. 431-442. doi:10.1016/j.gca.2019.08.030

Kölling, M, Bouimetarhan, I, Bowles, MW, Felis, T, Goldhammer, T, Hinrichs, KU, Schulz, M and Zabel, M (2019) Consistent CO2 release by pyrite oxidation on continental shelves prior to glacial terminations. Nature Geoscience, 12. 929-934. doi:10.1038/s41561-019-0465-9

Imachi, H, Tasumi, E, Takaki, Y, Hoshino, T, Schubotz, F, Gan, S, Tu, TH, Saito, Y, Yamanaka, Y, Ijiri, A, Matsui, Y, Miyazaki, M, Morono, Y, Takai, K, Hinrichs, KU and Inagaki, F (2019) Cultivable microbial community in 2-km-deep, 20-million-year-old subseafloor coalbeds through ~1000 days anaerobic bioreactor cultivation. Scientific Reports, 9(1). doi:10.1038/s41598-019-38754-w

Zhuang, GC, Montgomery, A, Samarkin, VA, Song, M, Liu, J, Schubotz, F, Teske, A, Hinrichs, KU and Joye, SB (2019) Generation and utilization of volatile fatty acids and alcohols in hydrothermally altered sediments in the Guaymas Basin, Gulf of California. Geophysical Research Letters, 46(5). 2637-2646. doi:10.1029/2018GL081284

D'Hondt, S, Inagaki, F, Orcutt, B and Hinrichs, KU (2019) IODP advances in the understanding of subseafloor life. Oceanography, 32(1). 198-207. doi:10.5670/oceanog.2019.146

Wörmer, L, Hoshino, T, Bowles, MW, Viehweger, B, Adhikari, RR, Xiao, N, Uramoto, G, Könneke, M, Lazar, CS, Morono, Y, Inagaki, F and Hinrichs, KU (2019) Microbial dormancy in the marine subsurface: Global endospore abundance and response to burial. Science Advances, 5(2). eaav1024. doi:10.1126/sciadv.aav1024 PANGAEA Supplementary Data

Alfken, S, Wörmer, L, Lipp, JS, Wendt, J, Taubner, H, Schimmelmann, A and Hinrichs, KU (2019) Micrometer scale imaging of sedimentary climate archives – Sample preparation for combined elemental and lipid biomarker analysis. Organic Geochemistry, 127. 81-91. doi:10.1016/j.orggeochem.2018.11.002

Bowden, SA, Mohamed, AY, Edilbi, ANF, Lin, YS, Morono, Y, Hinrichs, KU and Inagaki, F (2019) Modelling the Shimokita deep coalbed biosphere over deep geological time: Starvation, stimulation, material balance and population models. Basin Research. doi:10.1111/bre.12399

Lü, X, Chen, J, Han, T, Yang, H, Wu, W, Ding, W and Hinrichs, KU (2019) Origin of hydroxyl GDGTs and regular isoprenoid GDGTs in suspended particulate matter of Yangtze River Estuary. Organic Geochemistry, 128. 78-85. doi:10.1016/j.orggeochem.2018.12.010

Wörmer, L, Wendt, J, Alfken, S, Wang, JX, Elvert, M, Heuer, VB and Hinrichs, KU (2019) Towards multiproxy, ultra-high resolution molecular stratigraphy: Enabling laser-induced mass spectrometry imaging of diverse molecular biomarkers in sediments. Organic Geochemistry, 127. 136-145. doi:10.1016/j.orggeochem.2018.11.009

Arnosti, C, Hinrichs, KU, Coffinet, S, Wilkes, H and Pantoja, S (2019) The enduring questions: What's for dinner? Where's my knife? …and can I use my fingers? (unanswered) Questions related to organic matter and microbes in marine sediments. Frontiers in Marine Science, 6. doi:10.3389/fmars.2019.00629

Ijiri, A, Inagaki, F, Kubo, Y, Adhikari, RR, Hattori, S, Hoshino, T, Imachi, H, Kawagucci, S, Morono, Y, Ohtomo, Y, Ono, S, Sakai, S, Takai, K, Toki, T, Wang, DT, Yoshinaga, MY, Arnold, GL, Ashi, J, Case, DH, Feseker, T, Hinrichs, KU, Ikegawa, Y, Ikehara, M, Kallmeyer, J, Kumagai, H, Lever, MA, Morita, S, Nakamura, K, Nakamura, Y, Nishizawa, M, Orphan, VJ, Røy, H, Schmidt, F, Tani, A, Tanikawa, W, Terada, T, Tomaru, H, Tsuji, T, Tsunogai, U, Yamaguchi, YT and Yoshida, N (2018) Deep-biosphere methane production stimulated by geofluids in the Nankai accretionary complex. Science Advances, 4(6). eaao4631. doi:10.1126/sciadv.aao4631

Hurley, SJ, Lipp, JS, Close, HG, Hinrichs, KU and Pearson, A (2018) Distribution and export of isoprenoid tetraether lipids in suspended particulate matter from the water column of the Western Atlantic Ocean. Organic Geochemistry, 116. 90-102. doi:10.1016/j.orggeochem.2017.11.010 PANGAEA Supplementary Data

Gruen, DS, Wang, DT, Könneke, M, Topçuoğlu, BD, Stewart, LC, Goldhammer, T, Holden, JF, Hinrichs, KU and Ono, S (2018) Experimental investigation on the controls of clumped isotopologue and hydrogen isotope ratios in microbial methane. Geochimica et Cosmochimica Acta, 237. 339-356. doi:10.1016/j.gca.2018.06.029

Tanikawa, W, Tadai, O, Morono, Y, Hinrichs, KU and Inagaki, F (2018) Geophysical constraints on microbial biomass in subseafloor sediments and coal seams down to 2.5 km off Shimokita Peninsula, Japan. Progress in Earth and Planetary Science, 5(1). doi:10.1186/s40645-018-0217-2

Yu, T, Wu, W, Liang, W, Lever, MA, Hinrichs, KU and Wang, F (2018) Growth of sedimentary Bathyarchaeotaon lignin as an energy source. Proceedings of the National Academy of Sciences, 115(23). 6022-6027. doi:10.1073/pnas.1718854115

Schubotz, F, Xie, S, Lipp, JS, Hinrichs, KU and Wakeham, SG (2018) Intact polar lipids in the water column of the eastern tropical North Pacific: abundance and structural variety of non-phosphorus lipids. Biogeosciences, 15(21). 6481-6501. doi:10.5194/bg-15-6481-2018

Becker, KW, Elling, FJ, Schröder, JM, Lipp, JS, Goldhammer, T, Zabel, M, Elvert, M, Overmann, J and Hinrichs, KU (2018) Isoprenoid quinones resolve the stratification of redox processes in a biogeochemical continuum from the photic zone to deep anoxic sediments of the Black Sea. Applied and Environmental Microbiology, 84(10). e02736-17. doi:10.1128/AEM.02736-17 PANGAEA Supplementary Data

Evans, TW, Könneke, M, Lipp, JS, Adhikari, RR, Taubner, H, Elvert, M and Hinrichs, KU (2018) Lipid biosynthesis of Nitrosopumilus maritimus dissected by lipid specific radioisotope probing (lipid-RIP) under contrasting ammonium supply. Geochimica et Cosmochimica Acta, 242. 51-63. doi:10.1016/j.gca.2018.09.001 PANGAEA Supplementary Data

Liu, XL, Lipp, JS, Birgel, D, Summons, RE and Hinrichs, KU (2018) Predominance of parallel glycerol arrangement in archaeal tetraethers from marine sediments: Structural features revealed from degradation products. Organic Geochemistry, 115. 12-23. doi:10.1016/j.orggeochem.2017.09.009

Wu, W, Meador, T and Hinrichs, KU (2018) Production and turnover of microbial organic matter in surface intertidal sediments. Organic Geochemistry, 121. 104-113. doi:10.1016/j.orggeochem.2018.04.006

Zhuang, GC, Heuer, VB, Lazar, CS, Goldhammer, T, Wendt, J, Samarkin, VA, Elvert, M, Teske, AP, Joye, SB and Hinrichs, KU (2018) Relative importance of methylotrophic methanogenesis in sediments of the Western Mediterranean Sea. Geochimica et Cosmochimica Acta, 224. 171-186. doi:10.1016/j.gca.2017.12.024 PANGAEA Supplementary Data

Elling, FJ, Könneke, M, Nicol, GW, Stieglmeier, M, Bayer, B, Spieck, E, de la Torre, JR, Becker, KW, Thomm, M, Prosser, JI, Herndl, GJ, Schleper, C and Hinrichs, KU (2017) Chemotaxonomic characterisation of the thaumarchaeal lipidome. Environmental Microbiology, 19(7). 2681-2700. doi:10.1111/1462-2920.13759

Zhuang, GC, Lin, YS, Bowles, MW, Heuer, VB, Lever, MA, Elvert, M and Hinrichs, KU (2017) Distribution and isotopic composition of trimethylamine, dimethylsulfide and dimethylsulfoniopropionate in marine sediments. Marine Chemistry, 196. 35-46. doi:10.1016/j.marchem.2017.07.007 PANGAEA Supplementary Data

Liu, CH, Huang, X, Xie, TN, Duan, N, Xue, YR, Zhao, TX, Lever, MA, Hinrichs, KU and Inagaki, F (2017) Exploration of cultivable fungal communities in deep coal-bearing sediments from ∼1.3 to 2.5 km below the ocean floor. Environmental Microbiology, 19(2). 803-818. doi:10.1111/1462-2920.13653

Sollich, M, Yoshinaga, MY, Häusler, S, Price, RE, Hinrichs, KU and Bühring, SI (2017) Heat stress dictates microbial lipid composition along a thermal gradient in marine sediments. Frontiers in Microbiology, 8. doi:10.3389/fmicb.2017.01550

Lin, YS, Koch, BP, Feseker, T, Ziervogel, K, Goldhammer, T, Schmidt, F, Witt, M, Kellermann, MY, Zabel, M, Teske, A and Hinrichs, KU (2017) Near-surface heating of young rift sediment causes mass production and discharge of reactive dissolved organic matter. Scientific Reports, 7. 44864. doi:10.1038/srep44864

Meador, TB, Goldenstein, NI, Gogou, A, Herut, B, Psarra, S, Tsagaraki, TM and Hinrichs, KU (2017) Planktonic lipidome responses to aeolian dust input in low-biomass oligotrophic marine mesocosms. Frontiers in Marine Science, 4. doi:10.3389/fmars.2017.00113

Huguet, A, Meador, TB, Laggoun-Défarge, F, Könneke, M, Wu, W, Derenne, S and Hinrichs, KU (2017) Production rates of bacterial tetraether lipids and fatty acids in peatland under varying oxygen concentrations. Geochimica et Cosmochimica Acta, 203. 103-116. doi:10.1016/j.gca.2017.01.012

Gomez-Saez, GV, Pop Ristova, P, Sievert, SM, Elvert, M, Hinrichs, KU and Bühring, SI (2017) Relative importance of chemoautotrophy for primary production in a light exposed marine Shallow Hydrothermal System. Frontiers in Microbiology, 8. doi:10.3389/fmicb.2017.00702

Evans, TW, Wörmer, L, Lever, MA, Lipp, JS, Lagostina, L, Lin, YS, Jørgensen, BB and Hinrichs, KU (2017) Size and composition of subseafloor microbial community in the Benguela upwelling area examined from intact membrane lipid and DNA analysis. Organic Geochemistry, 111. 86-100. doi:10.1016/j.orggeochem.2017.06.008

Tavormina, PL, Kellermann, MY, Antony, CP, Tocheva, EI, Dalleska, NF, Jensen, AJ, Valentine, DL, Hinrichs, KU, Jensen, GJ, Dubilier, N and Orphan, VJ (2017) Starvation and recovery in the deep-sea methanotroph Methyloprofundus sedimenti. Molecular Microbiology, 103(2). 242-252. doi:10.1111/mmi.13553

Schmidt, F, Koch, BP, Goldhammer, T, Elvert, M, Witt, M, Lin, YS, Wendt, J, Zabel, M, Heuer, VB and Hinrichs, KU (2017) Unraveling signatures of biogeochemical processes and the depositional setting in the molecular composition of pore water DOM across different marine environments. Geochimica et Cosmochimica Acta, 207. 57-80. doi:10.1016/j.gca.2017.03.005

Natalicchio, M, Birgel, D, Peckmann, J, Lozar, F, Carnevale, G, Liu, X, Hinrichs, KU and Dela Pierre, F (2017) An archaeal biomarker record of paleoenvironmental change across the onset of the Messinian salinity crisis in the absence of evaporites (Piedmont Basin, Italy). Organic Geochemistry, 113. 242-253. doi:10.1016/j.orggeochem.2017.08.014

Braun, S, Morono, Y, Becker, KW, Hinrichs, KU, Kjeldsen, KU, Jørgensen, BB and Lomstein, BA (2016) Cellular content of biomolecules in sub-seafloor microbial communities. Geochimica et Cosmochimica Acta, 188. 330-351. doi:10.1016/j.gca.2016.06.019

Zhu, R, Versteegh, GJM and Hinrichs, KU (2016) Detection of microbial biomass in subseafloor sediment by pyrolysis–GC/MS. Journal of Analytical and Applied Pyrolysis, 118. 175-180. doi:10.1016/j.jaap.2016.02.002

Hamann, E, Gruber-Vodicka, HR, Kleiner, M, Tegetmeyer, HE, Riedel, D, Littmann, S, Chen, J, Milucka, J, Viehweger, B, Becker, KW, Dong, X, Stairs, CW, Hinrichs, KU, Brown, MW, Roger, AJ and Strous, M (2016) Environmental Breviatea harbour mutualistic Arcobacter epibionts. Nature. doi:10.1038/nature18297

Liu, XL, Birgel, D, Elling, FJ, Sutton, PA, Lipp, JS, Zhu, R, Zhang, C, Könneke, M, Peckmann, JL, Rowland, SJ, Summons, RE and Hinrichs, KU (2016) From ether to acid: A plausible degradation pathway of glycerol dialkyl glycerol tetraethers. Geochimica et Cosmochimica Acta, 183. 138-152. doi:10.1016/j.gca.2016.04.016

Lazar, CS, Baker, BJ, Seitz, K, Hyde, AS, Dick, GJ, Hinrichs, KU and Teske, AP (2016) Genomic evidence for distinct carbon substrate preferences and ecological niches of Bathyarchaeota in estuarine sediments. Environmental Microbiology, 18(4). 1200-1211. doi:10.1111/1462-2920.13142

Baker, BJ, Saw, JH, Lind, AE, Lazar, CS, Hinrichs, KU, Teske, AP and Ettema, TJG (2016) Genomic inference of the metabolism of cosmopolitan subsurface Archaea, Hadesarchaea. Nature Microbiology, 1(3). 16002. doi:10.1038/nmicrobiol.2016.2

Seitz, KW, Lazar, CS, Hinrichs, KU, Teske, AP and Baker, BJ (2016) Genomic reconstruction of a novel, deeply branched sediment archaeal phylum with pathways for acetogenesis and sulfur reduction. The ISME Journal, 10(7). 1696-1705. doi:10.1038/ismej.2015.233

Hurley, SJ, Elling, FJ, Könneke, M, Buchwald, C, Wankel, SD, Santoro, AE, Lipp, JS, Hinrichs, KU and Pearson, A (2016) Influence of ammonia oxidation rate on thaumarchaeal lipid composition and the TEX86temperature proxy. Proceedings of the National Academy of Sciences, 113(28). 7762-7767. doi:10.1073/pnas.1518534113

Elvert, M, Pohlman, JW, Becker, KW, Gaglioti, B, Hinrichs, KU and Wooller, MJ (2016) Methane turnover and environmental change from Holocene lipid biomarker records in a thermokarst lake in Arctic Alaska. The Holocene, 26(11). 1766-1777. doi:10.1177/0959683616645942 PANGAEA Supplementary Data

Dowell, F, Cardman, Z, Dasarathy, S, Kellermann, MY, Lipp, JS, Ruff, SE, Biddle, JF, McKay, LJ, MacGregor, BJ, Lloyd, KG, Albert, DB, Mendlovitz, H, Hinrichs, KU and Teske, A (2016) Microbial communities in methane- and short chain alkane-rich hydrothermal sediments of Guaymas Basin. Frontiers in Microbiology, 7. doi:10.3389/fmicb.2016.00017

Glombitza, C, Adhikari, RR, Riedinger, N, Gilhooly, WP, Hinrichs, KU and Inagaki, F (2016) Microbial sulfate reduction potential in coal-bearing sediments down to ~2.5 km below the seafloor off Shimokita peninsula, Japan. Frontiers in Microbiology, 7. doi:10.3389/fmicb.2016.01576

Zhuang, GC, Elling, FJ, Nigro, LM, Samarkin, VA, Joye, SB, Teske, A and Hinrichs, KU (2016) Multiple evidence for methylotrophic methanogenesis as the dominant methanogenic pathway in hypersaline sediments from the Orca Basin, Gulf of Mexico. Geochimica et Cosmochimica Acta, 187. 1-20. doi:10.1016/j.gca.2016.05.005 PANGAEA Supplementary Data

Elling, FJ, Becker, KW, Könneke, M, Schröder, JM, Kellermann, MY, Thomm, M and Hinrichs, KU (2016) Respiratory quinones in Archaea: phylogenetic distribution and application as biomarkers in the marine environment. Environmental Microbiology, 18. 692-707. doi:10.1111/1462-2920.13086

Zhu, C, Wakeham, SG, Elling, FJ, Basse, A, Mollenhauer, G, Versteegh, GJM, Könneke, M and Hinrichs, KU (2016) Stratification of archaeal membrane lipids in the ocean and implications for adaptation and chemotaxonomy of planktonic archaea. Environmental Microbiology. doi:10.1111/1462-2920.13289 PANGAEA Supplementary Data

Kellermann, MY, Yoshinaga, MY, Wegener, G, Krukenberg, V and Hinrichs, KU (2016) Tracing the production and fate of individual archaeal intact polar lipids using stable isotope probing. Organic Geochemistry, 95. 13-20. doi:10.1016/j.orggeochem.2016.02.004

Becker, KW, Elling, FJ, Yoshinaga, MY, Söllinger, A, Urich, T and Hinrichs, KU (2016) Unusual butane- and pentanetriol-based tetraether lipids in Methanomassiliicoccus luminyensis, a representative of the seventh order of methanogens. Applied and Environmental Microbiology, 82(15). 4505-4516. doi:10.1128/AEM.00772-16

Golyshina, OV, Golyshin, PN, Goldenstein, NI, Lünsdorf, H, Hinrichs, KU and Kublanov, IV (2016) The novel extremely acidophilic, cell-wall-deficient archaeon Cuniculiplasma divulgatum gen. nov., sp. nov. represents a new family, Cuniculiplasmataceae fam. nov., of the order Thermoplasmatales. International Journal of Systematic and Evolutionary Microbiology, 66(1). 332-340. doi:10.1099/ijsem.0.000725

Gagen, EJ, Yoshinaga, MY, Garcia Prado, F, Hinrichs, KU and Thomm, M (2016) The proteome and lipidome of Thermococcus kodakarensisacross the stationary phase. Archaea, 2016. 1-15. doi:10.1155/2016/5938289

Mills, HJ, de Leeuw, J, Hinrichs, KU, Inagaki, F and Kallmeyer, J (2015) Advancing subsurface biosphere and paleoclimate research: ECORD–ICDP–DCO–J-DESC–MagellanPlus Workshop Series Program Report. Scientific Drilling, 20. 59-65. doi:10.5194/sd-20-59-2015

Beulig, F, Heuer, VB, Akob, DM, Viehweger, B, Elvert, M, Herrmann, M, Hinrichs, KU and Küsel, K (2015) Carbon flow from volcanic CO2 into soil microbial communities of a wetland mofette. The ISME Journal, 9(3). 746-759. doi:10.1038/ismej.2014.148

Lazar, CS, Biddle, JF, Meador, TB, Blair, N, Hinrichs, KU and Teske, AP (2015) Environmental controls on intragroup diversity of the uncultured benthicarchaeaof the miscellaneous Crenarchaeotal group lineage naturally enriched in anoxic sediments of the White Oak River estuary (North Carolina, USA). Environmental Microbiology, 17(7). 2228-2238. doi:10.1111/1462-2920.12659

Inagaki, F, Hinrichs, KU, Kubo, Y, Bowles, MW, Heuer, VB, Hong, WL, Hoshino, T, Ijiri, A, Imachi, H, Ito, M, Kaneko, M, Lever, MA, Lin, YS, Methe, BA, Morita, S, Morono, Y, Tanikawa, W, Bihan, M, Bowden, SA, Elvert, M, Glombitza, C, Gross, D, Harrington, GJ, Hori, T, Li, K, Limmer, D, Liu, CH, Murayama, M, Ohkouchi, N, Ono, S, Park, YS, Phillips, SC, Prieto-Mollar, X, Purkey, M, Riedinger, N, Sanada, Y, Sauvage, J, Snyder, G, Susilawati, R, Takano, Y, Tasumi, E, Terada, T, Tomaru, H, Trembath-Reichert, E, Wang, DT and Yamada, Y (2015) Exploring deep microbial life in coal-bearing sediment down to 2.5 km below the ocean floor. Science, 349(6246). 420-424. doi:10.1126/science.aaa6882 PANGAEA Supplementary Data

Yao, M, Elling, FJ, Jones, CA, Nomosatryo, S, Long, CP, Crowe, SA, Antoniewicz, MR, Hinrichs, KU and Maresca, JA (2015) Heterotrophic bacteria from an extremely phosphate-poor lake have conditionally reduced phosphorus demand and utilize diverse sources of phosphorus. Environmental Microbiology, 18(2). 656-667. doi:10.1111/1462-2920.13063

Segarra, KEA, Schubotz, F, Samarkin, V, Yoshinaga, MY, Hinrichs, KU and Joye, SB (2015) High rates of anaerobic methane oxidation in freshwater wetlands reduce potential atmospheric methane emissions. Nature Communications, 6. 7477. doi:10.1038/ncomms8477

Lü, X, Liu, XL, Elling, FJ, Yang, H, Xie, S, Song, J, Li, X, Yuan, H, Li, N and Hinrichs, KU (2015) Hydroxylated isoprenoid GDGTs in Chinese coastal seas and their potential as a paleotemperature proxy for mid-to-low latitude marginal seas. Organic Geochemistry, 89-90. 31-43. doi:10.1016/j.orggeochem.2015.10.004

Elling, FJ, Könneke, M, Mußmann, M, Greve, A and Hinrichs, KU (2015) Influence of temperature, pH, and salinity on membrane lipid composition and TEX86 of marine planktonic thaumarchaeal isolates. Geochimica et Cosmochimica Acta, 171. 238-255. doi:10.1016/j.gca.2015.09.004

Yoshinaga, MY, Gagen, EJ, Wörmer, L, Broda, NK, Meador, TB, Wendt, J, Thomm, M and Hinrichs, KU (2015) Methanothermobacter thermautotrophicus modulates its membrane lipids in response to hydrogen and nutrient availability. Frontiers in Microbiology, 6. doi:10.3389/fmicb.2015.00005

Oni, OE, Schmidt, F, Miyatake, T, Kasten, S, Witt, M, Hinrichs, KU and Friedrich, MW (2015) Microbial communities and organic matter composition in surface and subsurface sediments of the Helgoland mud area, North Sea. Frontiers in Microbiology, 6. doi:10.3389/fmicb.2015.01290 PANGAEA Supplementary Data

Wang, DT, Gruen, DS, Lollar, BS, Hinrichs, KU, Stewart, LC, Holden, JF, Hristov, AN, Pohlman, JW, Morrill, PL, Könneke, M, Delwiche, KB, Reeves, EP, Sutcliffe, CN, Ritter, DJ, Seewald, JS, McIntosh, JC, Hemond, HF, Kubo, MD, Cardace, D, Hoehler, TM and Ono, S (2015) Nonequilibrium clumped isotope signals in microbial methane. Science, 348(6233). 428-431. doi:10.1126/science.aaa4326

Yoshinaga, MY, Lazar, CS, Elvert, M, Lin, YS, Zhu, C, Heuer, VB, Teske, AP and Hinrichs, KU (2015) Possible roles of uncultured archaea in carbon cycling in methane-seep sediments. Geochimica et Cosmochimica Acta, 164. 35-52. doi:10.1016/j.gca.2015.05.003

Becker, KW, Lipp, JS, Versteegh, GJM, Wörmer, L and Hinrichs, KU (2015) Rapid and simultaneous analysis of three molecular sea surface temperature proxies and application to sediments from the Sea of Marmara. Organic Geochemistry, 85. 42-53. doi:10.1016/j.orggeochem.2015.04.008 PANGAEA Supplementary Data

Meador, TB, Bowles, MW, Lazar, CS, Zhu, C, Teske, A and Hinrichs, KU (2015) The archaeal lipidome in estuarine sediment dominated by members of the Miscellaneous Crenarchaeotal Group. Environmental Microbiology, 17(7). 2441-2458. doi:10.1111/1462-2920.12716

Coban, H, Miltner, A, Elling, FJ, Hinrichs, KU and Kästner, M (2015) The contribution of biogas residues to soil organic matter formation and CO2 emissions in an arable soil. Soil Biology and Biochemistry, 86. 108-115. doi:10.1016/j.soilbio.2015.03.023

Felden, J, Ruff, SE, Ertefai, T, Inagaki, F, Hinrichs, KU and Wenzhöfer, F (2014) Anaerobic methanotrophic community of a 5346-m-deep vesicomyid clam colony in the Japan Trench. Geobiology, 12(3). 183-199. doi:10.1111/gbi.12078 PANGAEA Supplementary Data

Probst, AJ, Weinmaier, T, Raymann, K, Perras, A, Emerson, JB, Rattei, T, Wanner, G, Klingl, A, Berg, IA, Yoshinaga, MY, Viehweger, B, Hinrichs, KU, Thomas, BC, Meck, S, Auerbach, AK, Heise, M, Schintlmeister, A, Schmid, M, Wagner, M, Gribaldo, S, Banfield, JF and Moissl-Eichinger, C (2014) Biology of a widespread uncultivated archaeon that contributes to carbon fixation in the subsurface. Nature Communications, 5. 5497. doi:10.1038/ncomms6497

Yoshinaga, MY, Holler, T, Goldhammer, T, Wegener, G, Pohlman, JW, Brunner, B, Kuypers, MMM, Hinrichs, KU and Elvert, M (2014) Carbon isotope equilibration during sulphate-limited anaerobic oxidation of methane. Nature Geoscience, 7(3). 190-194. doi:10.1038/NGEO2069

Xie, S, Liu, XL, Schubotz, F, Wakeham, SG and Hinrichs, KU (2014) Distribution of glycerol ether lipids in the oxygen minimum zone of the Eastern Tropical North Pacific Ocean. Organic Geochemistry, 71. 60-71. doi:10.1016/j.orggeochem.2014.04.006

Basse, A, Zhu, C, Versteegh, GJM, Fischer, G, Hinrichs, KU and Mollenhauer, G (2014) Distribution of intact and core tetraether lipids in water column profiles of suspended particulate matter off Cape Blanc, NW Africa. Organic Geochemistry, 72. 1-13. doi:10.1016/j.orggeochem.2014.04.007 PANGAEA Supplementary Data

Elling, FJ, Könneke, M, Lipp, JS, Becker, KW, Gagen, EJ and Hinrichs, KU (2014) Effects of growth phase on the membrane lipid composition of the thaumarchaeon Nitrosopumilus maritimus and their implications for archaeal lipid distributions in the marine environment. Geochimica et Cosmochimica Acta, 141. 579-597. doi:10.1016/j.gca.2014.07.005

Schmidt, F, Koch, BP, Witt, M and Hinrichs, KU (2014) Extending the analytical window for water-soluble organic matter in sediments by aqueous Soxhlet extraction. Geochimica et Cosmochimica Acta, 141. 83-96. doi:10.1016/j.gca.2014.06.009 PANGAEA Supplementary Data

Bühring, SI, Kamp, A, Wörmer, L, Ho, S and Hinrichs, KU (2014) Functional structure of laminated microbial sediments from a supratidal sandy beach of the German Wadden Sea (St. Peter-Ording). Journal of Sea Research, 85. 463-473. doi:10.1016/j.seares.2013.08.001 PANGAEA Supplementary Data

Zhuang, GC, Lin, YS, Elvert, M, Heuer, VB and Hinrichs, KU (2014) Gas chromatographic analysis of methanol and ethanol in marine sediment pore waters: Validation and implementation of three pretreatment techniques. Marine Chemistry, 160. 82-90. doi:10.1016/j.marchem.2014.01.011 PANGAEA Supplementary Data

Bowles, MW, Mogollón, JM, Kasten, S, Zabel, M and Hinrichs, KU (2014) Global rates of marine sulfate reduction and implications for sub-sea-floor metabolic activities. Science, 344(6186). 889-891. doi:10.1126/science.1249213

Birgel, D, Guido, A, Liu, X, Hinrichs, KU, Gier, S and Peckmann, JL (2014) Hypersaline conditions during deposition of the Calcare di Base revealed from archaeal di- and tetraether inventories. Organic Geochemistry, 77. 11-21. doi:10.1016/j.orggeochem.2014.09.002

Zhu, C, Yoshinaga, MY, Peters, CA, Liu, XL, Elvert, M and Hinrichs, KU (2014) Identification and significance of unsaturated archaeal tetraether lipids in marine sediments. Rapid Communications in Mass Spectrometry, 28(10). 1144-1152. doi:10.1002/rcm.6887

Meador, TB, Zhu, C, Elling, FJ, Könneke, M and Hinrichs, KU (2014) Identification of isoprenoid glycosidic glycerol dibiphytanol diethers and indications for their biosynthetic origin. Organic Geochemistry, 69. 70-75. doi:10.1016/j.orggeochem.2014.02.005

Liu, XL, Zhu, C, Wakeham, SG and Hinrichs, KU (2014) In situ production of branched glycerol dialkyl glycerol tetraethers in anoxic marine water columns. Marine Chemistry, 166. 1-8. doi:10.1016/j.marchem.2014.08.008

Wang, FP, Zhang, Y, Chen, Y, He, Y, Qi, J, Hinrichs, KU, Zhang, XX, Xiao, X and Boon, N (2014) Methanotrophic archaea possessing diverging methane-oxidizing and electron-transporting pathways. The ISME Journal, 8(5). 1069-1078. doi:10.1038/ismej.2013.212

Reeves, EP, Yoshinaga, MY, Pjevac, P, Goldenstein, NI, Peplies, J, Meyerdierks, A, Amann, R, Bach, W and Hinrichs, KU (2014) Microbial lipids reveal carbon assimilation patterns on hydrothermal sulfide chimneys. Environmental Microbiology, 16(11). 3515-3532. doi:10.1111/1462-2920.12525

Zhu, R, Lin, YS, Lipp, JS, Meador, TB and Hinrichs, KU (2014) Optimizing sample pretreatment for compound-specific stable carbon isotopic analysis of amino sugars in marine sediment. Biogeosciences, 11(17). 4869-4880. doi:10.5194/bg-11-4869-2014

Imachi, H, Sakai, S, Lipp, JS, Miyazaki, M, Saito, Y, Yamanaka, Y, Hinrichs, KU, Inagaki, F and Takai, K (2014) Pelolinea submarina gen. nov., sp. nov., an anaerobic, filamentous bacterium of the phylum Chloroflexi isolated from subseafloor sediment. International Journal of Systematic and Evolutionary Microbiology, 64(Pt 3). 812-818. doi:10.1099/ijs.0.057547-0

Meador, TB, Gagen, EJ, Loscar, ME, Goldhammer, T, Yoshinaga, MY, Wendt, J, Thomm, M and Hinrichs, KU (2014) Thermococcus kodakarensis modulates its polar membrane lipids and elemental composition according to growth stage and phosphate availability. Frontiers in Microbiology, 5. doi:10.3389/fmicb.2014.00010 PANGAEA Supplementary Data

Feng, D, Birgel, D, Peckmann, J, Roberts, HH, Joye, SB, Sassen, R, Liu, XL, Hinrichs, KU and Chen, D (2014) Time integrated variation of sources of fluids and seepage dynamics archived in authigenic carbonates from Gulf of Mexico Gas Hydrate Seafloor Observatory. Chemical Geology, 385. 129-139. doi:10.1016/j.chemgeo.2014.07.020

Wörmer, L, Elvert, M, Fuchser, J, Lipp, JS, Buttigieg, PL, Zabel, M and Hinrichs, KU (2014) Ultra-high-resolution paleoenvironmental records via direct laser-based analysis of lipid biomarkers in sediment core samples. Proceedings of the National Academy of Sciences of the United States of America, 111(44). 15669-15674. doi:10.1073/pnas.1405237111 PANGAEA Supplementary Data

Wörmer, L, Lipp, JS, Schröder, JM and Hinrichs, KU (2013) Application of two new LC–ESI–MS methods for improved detection of intact polar lipids (IPLs) in environmental samples. Organic Geochemistry, 59. 10-21. doi:10.1016/j.orggeochem.2013.03.004

Lin, YS, Lipp, JS, Elvert, M, Holler, T and Hinrichs, KU (2013) Assessing production of the ubiquitous archaeal diglycosyl tetraether lipids in marine subsurface sediment using intramolecular stable isotope probing. Environmental Microbiology, 15(5). 1634-1646. doi:10.1111/j.1462-2920.2012.02888.x

Raggi, L, Schubotz, F, Hinrichs, KU, Dubilier, N and Petersen, JM (2013) Bacterial symbionts of Bathymodiolus mussels and Escarpia tubeworms from Chapopote, an asphalt seep in the southern Gulf of Mexico. Environmental Microbiology, 15(7). 1969-1987. doi:10.1111/1462-2920.12051

Zhu, C, Lipp, JS, Wörmer, L, Becker, KW, Schröder, J and Hinrichs, KU (2013) Comprehensive glycerol ether lipid fingerprints through a novel reversed phase liquid chromatography–mass spectrometry protocol. Organic Geochemistry, 65. 53-62. doi:10.1016/j.orggeochem.2013.09.012

Contreras, S, Meister, P, Liu, B, Prieto-Mollar, X, Hinrichs, KU, Khalili, A, Ferdelman, TG, Kuypers, MMM and Jorgensen, BB (2013) Cyclic 100-ka (glacial-interglacial) migration of subseafloor redox zonation on the Peruvian shelf. Proceedings of the National Academy of Sciences, 110(45). 18098-18103. doi:10.1073/pnas.1305981110

Leider, A, Hinrichs, KU, Schefuß, E and Versteegh, GJM (2013) Distribution and stable isotopes of plant wax derived n-alkanes in lacustrine, fluvial and marine surface sediments along an Eastern Italian transect and their potential to reconstruct the hydrological cycle. Geochimica et Cosmochimica Acta, 117. 16-32. doi:10.1016/j.gca.2013.04.018 PANGAEA Supplementary Data

Xie, S, Lazar, CS, Lin, YS, Teske, A and Hinrichs, KU (2013) Ethane- and propane-producing potential and molecular characterization of an ethanogenic enrichment in an anoxic estuarine sediment. Organic Geochemistry, 59. 37-48. doi:10.1016/j.orggeochem.2013.03.001

Lever, MA, Rouxel, OJ, Alt, JC, Shimizu, N, Ono, S, Coggon, RM, Shanks, WC, Lapham, L, Elvert, M, Prieto-Mollar, X, Hinrichs, KU, Inagaki, F and Teske, AP (2013) Evidence for microbial carbon and sulfur cycling in deeply buried ridge flank basalt. Science, 339(6125). 1305-1308. doi:10.1126/science.1229240 PANGAEA Supplementary Data

Zhu, C, Meador, TB, Dummann, W and Hinrichs, KU (2013) Identification of unusual butanetriol dialkyl glycerol tetraether and pentanetriol dialkyl glycerol tetraether lipids in marine sediments. Rapid Communications in Mass Spectrometry, 28(4). 332-338. doi:10.1002/rcm.6792

Zhu, R, Evans, TW, Wörmer, L, Lin, YS, Zhu, C and Hinrichs, KU (2013) Improved sensitivity of sedimentary phospholipid analysis resulting from a novel extract cleanup strategy. Organic Geochemistry, 65. 46-52. doi:10.1016/j.orggeochem.2013.10.002

Gagen, EJ, Huber, H, Meador, TB, Hinrichs, KU and Thomm, M (2013) Novel cultivation-based approach to understanding the miscellaneous crenarchaeotic group (MCG) archaea from sedimentary ecosystems. Applied and Environmental Microbiology, 79(20). 6400-6406. doi:10.1128/aem.02153-13

Schubotz, F, Meyer-Dombard, DR, Bradley, AS, Fredricks, HF, Hinrichs, KU, Shock, EL and Summons, RE (2013) Spatial and temporal variability of biomarkers and microbial diversity reveal metabolic and community flexibility in Streamer Biofilm Communities in the Lower Geyser Basin, Yellowstone National Park. Geobiology, 11(6). 549-569. doi:10.1111/gbi.12051

Xie, S, Lipp, JS, Wegener, G, Ferdelman, TG and Hinrichs, KU (2013) Turnover of microbial lipids in the deep biosphere and growth of benthic archaeal populations. PNAS, 110(15). 6010-6014. doi:10.1073/pnas.1218569110 PANGAEA Supplementary Data

Grauel, AL, Leider, A, Goudeau, MLS, Müller, IA, Bernasconi, SM, Hinrichs, KU, de Lange, GJ, Zonneveld, KAF and Versteegh, GJM (2013) What do SST proxies really tell us? A high-resolution multiproxy (UK′37, TEXH86 and foraminifera δ18O) study in the Gulf of Taranto, central Mediterranean Sea. Quaternary Science Reviews, 73. 115-131. doi:10.1016/j.quascirev.2013.05.007

Becker, KW, Lipp, JS, Zhu, C, Liu, XL and Hinrichs, KU (2013) An improved method for the analysis of archaeal and bacterial ether core lipids. Organic Geochemistry, 61. 34-44. doi:10.1016/j.orggeochem.2013.05.007

Schouten, S, Hopmans, EC, Rosell-Melé, A, Pearson, A, Adam, P, Bauersachs, T, Bard, E, Bernasconi, SM, Bianchi, TS, Brocks, JJ, Carlson, LT, Castañeda, IS, Derenne, S, Selver, AD, Dutta, K, Eglinton, TI, Fosse, C, Galy, V, Grice, K, Hinrichs, KU, Huang, Y, Huguet, A, Huguet, C, Hurley, S, Ingalls, A, Jia, G, Keely, B, Knappy, C, Kondo, M, Krishnan, S, Lincoln, S, Lipp, JS, Mangelsdorf, K, Martinez-Garcia, A, Ménot, G, Mets, A, Mollenhauer, G, Ohkouchi, N, Ossebaar, J, Pagani, M, Pancost, RD, Pearson, EJ, Peterse, F, Reichart, GJ, Schaeffer, P, Schmitt, G, Schwark, L, Shah, SR, Smith, RW, Smittenberg, RH, Summons, RE, Takano, Y, Talbot, HM, Taylor, KWR, Tarozo, R, Uchida, M, van Dongen, BE, Van Mooy, BAS, Wang, J, Warren, C, Weijers, JWH, Werne, JP, Woltering, M, Xie, S, Yamamoto, M, Yang, H, Zhang, CL, Zhang, Y, Zhao, M and Damsté, JSS (2013) An interlaboratory study of TEX86and BIT analysis of sediments, extracts, and standard mixtures. Geochemistry, Geophysics, Geosystems, 14(12). 5263-5285. doi:10.1002/2013GC004904

Wegener, G, Bausch, M, Holler, T, Thang, NM, Mollar, XP, Kellermann, MY, Hinrichs, KU and Boetius, A (2012) Assessing sub-seafloor microbial activity by combined stable istotope probing with deuterated water and 13C-bicarbonates. Environmental Microbiology, 14(6). 1517-1527. doi:10.1111/j.1462-2920.2012.02739.x

Kellermann, MY, Wegener, G, Elvert, M, Yoshinaga, MY, Lin, YS, Holler, T, Mollar, XP, Knittel, K and Hinrichs, KU (2012) Autotrophy as a predominant mode of carbon fixation in anaerobic methane-oxidizing microbial communities. Proceedings of the National Academy of Sciences of the United States of America, 109. 19321-19326. doi:10.1073/pnas.1208795109

Wakeham, SG, Turich, C, Schubotz, F, Podlaska, A, Li, XN, Varela, R, Astor, Y, Saenz, JP, Rush, D, Damste, JSS, Summons, RE, Scranton, M, Taylor, GT and Hinrichs, KU (2012) Biomarkers, chemistry and microbiology show chemoautotrophy in a multilayer chemocline in the Cariaco Basin. Deep Sea Research Part I: Oceanographic Research Papers, 63. 133-156. doi:10.1016/j.dsr.2012.01.005

Könneke, M, Lipp, JS and Hinrichs, KU (2012) Carbon isotope fractionation by the marine ammonia-oxidizing archaeon Nitrosopumilus maritimus. Organic Geochemistry, 48. 21-24. doi:10.1016/j.orggeochem.2012.04.007

Wörmer, L, Cirés, S, Velázquez, D, Quesada, A and Hinrichs, KU (2012) Cyanobacterial heterocyst glycolipids in cultures and environmental samples: Diversity and biomarker potential. Limnology and Oceanography, 57(6). 1775-1788. doi:10.4319/lo.2012.57.6.1775

Liu, XL, Summons, RE and Hinrichs, KU (2012) Extending the known range of glycerol ether lipids in the environment: structural assignments based on tandem mass spectral fragmentation patterns. Rapid Communications in Mass Spectrometry, 26(19). 2295-2302. doi:10.1002/rcm.6355

Nuzzo, M, Elvert, M, Schmidt, M, Scholz, F, Reitz, A, Hinrichs, KU and Hensen, C (2012) Impact of hot fluid advection on hydrocarbon gas production and seepage in mud volcano sediments of thick Cenozoic deltas. Earth and Planetary Science Letters, 357. 421. doi:10.1016/j.epsl.2012.05.009 PANGAEA Supplementary Data

Liu, XL, Lipp, JS, Schröder, JM, Summons, RE and Hinrichs, KU (2012) Isoprenoid glycerol dialkanol diethers: A series of novel archaeal lipids in marine sediments. Organic Geochemistry, 43. 50-55. doi:10.1016/j.orggeochem.2011.11.002

Bühring, S, Schubotz, F, Harms, C, Lipp, JS, Amils, R and Hinrichs, KU (2012) Lipid signatures of acidophilic microbial communities in an extreme, acidic environment: Río Tinto, Spain. Organic Geochemistry, 47. 66-77. doi:10.1016/j.orggeochem.2012.03.010

Liu, XL, Lipp, JS, Simpson, JH, Lin, YS, Summons, RE and Hinrichs, KU (2012) Mono- and dihydroxyl glycerol dibiphytanyl glycerol tetraethers in marine sediments: Identification of both core and intact polar lipid forms. Geochimica et Cosmochimica Acta, 89. 102-115. doi:10.1016/j.gca.2012.04.053 PANGAEA Supplementary Data

Yoshinaga, MY, Wörmer, L, Elvert, M and Hinrichs, KU (2012) Novel Cardiolipins from Uncultured Methane-Metabolizing Archaea. Archaea-An International Microbiological Journal, 2012. doi:10.1155/2012/832097 PANGAEA Supplementary Data

Hädrich, A, Heuer, VB, Herrmann, M, Hinrichs, KU and Küsel, K (2012) Origin and fate of acetate in an acidic fen. FEMS Microbiology Ecology, 81(2). 339-354. doi:10.1111/j.1574-6941.2012.01352.x

Wooller, MJ, Pohlman, JW, Gaglioti, BV, Langdon, P, Jones, M, Walter Anthony, KM, Becker, KW, Hinrichs, KU and Elvert, M (2012) Reconstruction of past methane availability in an Arctic Alaska wetland indicates climate influenced methane release during the past ~12,000 years. Journal of Paleolimnology, 48(1). 27-42. doi:10.1007/s10933-012-9591-8

Kellermann, MY, Schubotz, F, Elvert, M, Lipp, JS, Birgel, D, Prieto-Mollar, X, Dubilier, N and Hinrichs, KU (2012) Symbiont-host relationships in chemosynthetic mussels: A comprehensive lipid biomarker study. Organic Geochemistry, 43(1). 112-124. doi:10.1016/j.orggeochem.2011.10.005

Lin, YS, Heuer, VB, Goldhammer, T, Kellermann, MY, Zabel, M and Hinrichs, KU (2012) Towards constraining H2 concentration in subseafloor sediment: a proposal for combined analysis by two distinct approaches. Geochimica et Cosmochimica Acta, 77(15). 186-201. doi:10.1016/j.gca.2011.11.008 PANGAEA Supplementary Data

Schmidt, F, Koch, BP, Elvert, M, Schmidt, G, Witt, M and Hinrichs, KU (2011) Diagenetic transformation of dissolved organic nitrogen compounds under contrasting sedimentary redox conditions in the Black Sea. Environmental Science & Technology, 45(12). 5223-5229. doi:10.1021/es2003414 PANGAEA Supplementary Data

Liu, XL, Lipp, JS and Hinrichs, KU (2011) Distribution of intact and core GDGTs in marine sediments. Organic Geochemistry, 42(4). 368-375. doi:10.1016/j.orggeochem.2011.02.003

Rossel, PE, Elvert, M, Ramette, A, Boetius, A and Hinrichs, KU (2011) Factors controlling the distribution of anaerobic methanotrophic communities in marine environments: Evidence from intact polar membrane lipids. Geochimica et Cosmochimica Acta, 75(1). 164-184. doi:10.1016/j.gca.2010.09.031

Bühring, S, Sievert, SM, Jonkers, HM, Elshahed, MS, Krumholz, LR and Hinrichs, KU (2011) Insights into chemotaxonomic composition and carbon cycling of phototrophic communities in an artesian sulfur-rich spring (Zodletone, Oklahoma, USA), a possible analog for ancient microbial mat systems. Geobiology, 9(2). 166-179. doi:10.1111/j.1472-4669.2010.00268.x

Zhang, YG, Zhang, CL, Liu, XL, Li, L, Hinrichs, KU and Noakes, JE (2011) Methane Index: A tetraether archaeal lipid biomarker indicator for detecting the instability of marine gas hydrates. Earth and Planetary Science Letters, 307(3-4). 525-534. doi:10.1016/j.epsl.2011.05.031 PANGAEA Supplementary Data

Jessen, GL, Pantoja, S, Gutierrez, MA, Quiñones, R, Gonzalez, RR, Sellanes, J, Kellermann, MY and Hinrichs, KU (2011) Methane in shallow cold seeps at Mocha Island off central Chile. Continental Shelf Research, 31(6). 574-581. doi:10.1016/j.csr.2010.12.012

Schubotz, F, Lipp, JS, Elvert, M, Kasten, S, Mollar, XP, Zabel, M, Bohrmann, G and Hinrichs, KU (2011) Petroleum degradation and associated microbial signatures at the Chapopote asphalt volcano, Southern Gulf of Mexico. Geochimica et Cosmochimica Acta, 75(16). 4377-4398. doi:10.1016/j.gca.2011.05.025

Cook, MS, Keigwin, LD, Birgel, D and Hinrichs, KU (2011) Repeated pulses of vertical methane flux recorded in glacial sediments from the southeast Bering Sea. Paleoceanography, 26. PA2210. doi:10.1029/2010PA001993 PANGAEA Supplementary Data

Schubotz, F, Lipp, JS, Elvert, M and Hinrichs, KU (2011) Stable carbon isotopic compositions of intact polar lipids reveal complex carbon flow patterns among hydrocarbon degrading microbial communities at the Chapopote asphalt volcano. Geochimica et Cosmochimica Acta, 75(16). 4399-4415. doi:10.1016/j.gca.2011.05.018

Yoshinaga, MY, Kellermann, MY, Rossel, PE, Schubotz, F, Lipp, JS and Hinrichs, KU (2011) Systematic fragmentation patterns of archaeal intact polar lipids by high-performance liquid chromatography/electrospray ionization ion-trap mass spectrometry. Rapid Communications in Mass Spectrometry, 25. 3563-3574. doi:10.1002/rcm.5251

Holler, T, Widdel, F, Knittel, K, Amann, R, Kellermann, MY, Hinrichs, KU, Teske, AP, Boetius, A and Wegener, G (2011) Thermophilic anaerobic oxidation of methane by marine microbial consortia. Isme Journal, 5(12). 1946-1956. doi:10.1038/ismej.2011.77

Lever, MA, Heuer, VB, Morono, Y, Masui, N, Schmidt, F, Alperin, MJ, Inagaki, F, Hinrichs, KU and Teske, AP (2010) Acetogenesis in deep subseafloor sediemnts of the Juan de Fuca Ridge flank: A synthesis of geochemical, thermodynamic, and gene-based evidence. Geomicrobiology Journal, 27(2). 183-211. doi:10.1080/01490450903456681

Hinrichs, KU, Michaelis, W and Rullkötter, J (2010) Advances in Organic Geochemistry 2009 - Proceedings of the 24th International Meeting on Organic Geochemistry. Organic Geochemistry, 41(9). 857. doi:10.1016/j.orggeochem.2010.06.007

Leider, A, Hinrichs, KU, Mollenhauer, G and Versteegh, GJM (2010) Core-top calibration of the lipid-based U-37(K)' and TEX86 temperature proxies on the southern Italian shelf (SW Adriatic Sea, Gulf of Taranto). Earth and Planetary Science Letters, 300(1-2). 112-124. doi:10.1016/j.epsl.2010.09.042 PANGAEA Supplementary Data

Rethemeyer, J, Schubotz, F, Talbot, HM, Cooke, MP, Hinrichs, KU and Mollenhauer, G (2010) Distribution of polar membrane lipids in permafrost soils and sediments of a small high Arctic catchment. Organic Geochemistry, 41. 1130-1145. doi:10.1016/j.orggeochem.2010.06.004

Lin, YS, Biddle, JF, Lipp, JS, Orcutt, B, Holler, T, Teske, AP and Hinrichs, KU (2010) Effect of storage conditions on archaeal and bacterial communities in subsurface marine sediments. Geomicrobiology Journal, 27. 261-272. doi:10.1080/01490450903410423 PANGAEA Supplementary Data

Heuer, VB, Krüger, M, Elvert, M and Hinrichs, KU (2010) Experimental studies on the stable carbon isotope biogeochemistry of acetate in lake sediments. Organic Geochemistry, 41(1). 22-30. doi:10.1016/j.orggeochem.2009.07.004.

Perevalova, AA, Bidzhieva, SK, Kublanov, IV, Hinrichs, KU, Liu, XL, Mardanov, AV, Lebedinsky, AV and Bonch-Osmolovskaya, EA (2010) Fervidococcus fontis gen. nov., sp.nov., an anaerobic, thermophilic crenarchaeote from terrestrial hot springs, and proposal of Fervidococcaceae fam. nov. and Fervidococcales ord. nov. International Journal of Systematic and Evolutionary Microbiology, 60. 2082-2088. doi:10.1099/kjs.0.019042-0

Kinnaman, FS, Kimball, J, Busso, L, Birgel, D, Ding, H, Hinrichs, KU and Valentine, DL (2010) Gas flux and carbonate occurrence at a shallow seep of thermogenic natural gas. Geo-Marine Letters, 30(3-4). 355-365. doi:10.1007/s00367-010-0184-0

Liu, XL, Leider, A, Gillespie, A, Gröger, J, Versteegh, GJM and Hinrichs, KU (2010) Identification of polar lipid precursors of the ubiquitous branched GDGT orphan lipids in a peat bog in Northern Germany. Organic Geochemistry, 41(7). 653-660. doi:10.1016/j.orggeochem.2010.04.004 PANGAEA Supplementary Data

Lin, YS, Lipp, JS, Yoshinaga, MY, Lin, SH, Elvert, M and Hinrichs, KU (2010) Intramolecular stable carbon isotopic analysis of archaeal glycosyl tetraether lipids. Rapid Communications in Mass Spectrometry, 24(19). 2817-2826. doi:10.1002/rcm.4707 PANGAEA Supplementary Data

Lin, YS, Heuer, VB, Ferdelman, TG and Hinrichs, KU (2010) Microbial conversion of inorganic carbon to dimethyl sulfide in anoxic lake sediment (Plußsee, Germany). Biogeosciences, 7(8). 2433-2444. doi:10.5194/bg-7-2433-2010 PANGAEA Supplementary Data

Pape, T, Bahr, A, Rethemeyer, J, Kessler, JD, Sahling, H, Hinrichs, KU, Klapp, SA, Reeburgh, WS and Bohrmann, G (2010) Molecular and isotopic partitioning of low-molecular-weight hydrocarbons during migration and gas hydrate precipitation in deposits of a high-flux seepage site. Chemical Geology, 269(3-4). 350-363. doi:10.1016/j.chemgeo.2009.10.009 PANGAEA Supplementary Data

Borin, S, Ventura, S, Tambone, F, Mapelli, F, Schubotz, F, Brusetti, L, Scaglia, B, D'Acqui, L, Solheim, B, Turicchia, S, Marasco, R, Hinrichs, KU, Baldi, F, Adani, F and Daffonchio, D (2010) Rock weathering creates oases of life in a High Arctic desert. Environmental Microbiology, 12(2). 293-303. doi:10.1111/j.1462-2920.2009.02059.x

Takano, Y, Chikaraishi, Y, Ogawa, NO, Nomaki, H, Morono, Y, Inagaki, F, Kitazato, H, Hinrichs, KU and Ohkouchi, N (2010) Sedimentary membrane lipids recycled by deep-sea benthic archaea. Nature Geoscience, 3(12). 858-861. doi:10.1038/NGEO983

Schmidt, F, Hinrichs, KU and Elvert, M (2010) Sources, transport, and partitioning of organic matter at a highly dynamic continental margin. Marine Chemistry, 118(1-2). 37-55. doi:10.1016/j.marchem.2009.10.003 PANGAEA Supplementary Data

Ertefai, TF, Heuer, VB, Prieto-Mollar, X, Vogt, C, Sylva, SP, Seewald, JS and Hinrichs, KU (2010) The biogeochemistry of sorbed methane in marine sediments. Geochimica et Cosmochimica Acta, 74. 6033-6048. doi:10.1016/j.gca.2010.08.006 PANGAEA Supplementary Data

Schubotz, F, Wakeham, SG, Lipp, JS, Fredricks, HF and Hinrichs, KU (2009) Detection of microbial biomass by intact polar membrane lipid analysis in the water column and surface sediments of the Black Sea. Environmental Microbiology, 11(10). 2720-2734. doi:10.1111/j.1462-2920.2009.01999.x

Joye, SB, Samarkin, VA, Orcutt, BN, MacDonald, IR, Hinrichs, KU, Elvert, M, Teske, AP, Lloyd, KG, Montoya, JP and Meile, CD (2009) Metabolic variability in seafloor brines revealed by carbon and sulphur dynamics. Nature Geosciences, 2. 349-354. doi:10.1038/ngeo475

Schmidt, F, Elvert, M, Koch, BP, Witt, M and Hinrichs, KU (2009) Molecular characterization of dissolved organic matter in pore water of continental shelf sediments. Geochimica et Cosmochimica Acta, 73(11). 3337-3358. doi:10.1016/j.gca.2009.03.008

Sepúlveda, J, Wendler, J, Leider, A, Kuss, HJ, Summons, RE and Hinrichs, KU (2009) Molecular-isotopic evidence of environmental and ecological changes across the Cenomanian-Turonian boundary in the Levant Platform of central Jordan. Organic Geochemistry, 40. 553-568. doi:10.1016/j.orggeochem.2009.02.009

Sepúlveda, J, Wendler, J, Summons, RE and Hinrichs, KU (2009) Rapid Resurgence of Marine Productivity After the Cretaceous-Paleogene Mass Extinction. Science, 326. 129-132. doi:10.1126/science.1176233

Lipp, JS and Hinrichs, KU (2009) Structural diversity and fate of intact polar lipids in marine sediments. Geochimica et Cosmochimica Acta, 73(22). 6816-6833. doi:10.1016/j.gca.2009.08.003 PANGAEA Supplementary Data

Bradley, AS, Fredricks, HF, Hinrichs, KU and Summons, RE (2009) Structural diversity of diether lipids in carbonate chimneys at the Lost City Hydrothermal Field. Organic Geochemistry, 40(12). 1169-1178. doi:10.1016/j.orggeochem.2009.09.004

Bühring, S, Smittenberg, RH, Sachse, D, Lipp, JS, Golubic, S, Sachs, JP, Hinrichs, KU and Summons, RE (2009) A hypersaline microbial mat from the Pacific Atoll Kiritimati: Insight into composition and carbon fixation using biomarker analyses and a 13C-labeling approach. Geobiology, 7(3). 308 - 323. doi:10.1111/j.1472-4669.2009.00198.x PANGAEA Supplementary Data

Heuer, VB, Pohlman, JW, Torres, ME, Elvert, M and Hinrichs, KU (2009) The stable carbon isotope biogeochemistry of acetate and other dissolved carbon species in deep subseafloor sediments at the northern Cascadia Margin. Geochimica et Cosmochimica Acta, 73. 3323-3336. doi:10.1016/j.gca.2009.03.001 PANGAEA Supplementary Data

Wegener, G, Niemann, H, Elvert, M, Hinrichs, KU and Boetius, A (2008) Assimilation of methane and inorganic carbon by microbial communities mediating the anaerobic oxidation of methane. Environmental Microbiology, 10(9). 2287-2298. doi:10.1111/j.1462-2920.2008.01653.x

Stadnitskaia, A, Bouloubassi, I, Elvert, M, Hinrichs, KU and Sinninghe Damsté, JS (2008) Extended hydroxyarchaeol, a novel lipid biomarker for anaerobic methanotrophy in cold seepage habitats. Organic Geochemistry, 39(8). 1007-1014. doi:10.1016/j.orggeochem.2008.04.019

de Deckker, P, Abed, RMM, de Beer, D, Hinrichs, KU, O'Loingsigh, T, Schefuß, E, Stuut, JB, Tapper, NJ and van der Kaars, S (2008) Geochemical and microbiological fingerprinting of airborne dust that fell in Canberra, Australia, in October 2002. Geochemistry Geophysics Geosystems, 9. Q12Q10. doi:10.1029/2008GC002091

Meckler, AN, Schubert, CJ, Hochuli, PA, Plessen, B, Birgel, D, Flower, BP, Hinrichs, KU and Haug, GH (2008) Glacial to Holocene terrigenous organic matter input to sediments from Orca Basin, Gulf of Mexico - a combined optical and biomarker approach. Earth and Planetary Science Letters, 272(1-2). 251-263. doi:10.1016/j.epsl.2008.04.046

Rossel, PE, Lipp, JS, Fredricks, HF, Arnds, J, Boetius, A, Elvert, M and Hinrichs, KU (2008) Intact polar lipids of anaerobic methanotrophic archaea and associated bacteria. Organic Geochemistry, 39(8). 992-999. doi:10.1016/j.orggeochem.2008.02.021

Strapoc, D, Picardal, FW, Turich, C, Schaperdoth, I, Macalady, JL, Lipp, JS, Lin, YS, Ertefai, TF, Schubotz, F, Hinrichs, KU, Mastalerz, M and Schimmelmann, A (2008) Methane-Producing Microbial Community in a Coal Bed of the Illinois Basin. Applied and Environmental Microbiology, 74. 2424-2432. doi:10.1128/AEM.02341-07

Lipp, JS, Morono, Y, Inagaki, F and Hinrichs, KU (2008) Significant contribution of Archaea to extant biomass in marine subsurface sediments. Nature, 454(t207). 991-994. doi:10.1038/nature07174 PANGAEA Supplementary Data

Ertefai, TF, Fisher, MC, Fredricks, HF, Lipp, JS, Birgel, D, Udert, KM, Cavanaugh, CM, Pearson, A, Gschwend, PM and Hinrichs, KU (2008) Vertical distribution of microbial lipids and functional genes in chemically distinct layers of a highly polluted meromictic lake. Organic Geochemistry, 39(11). 1572-1588. doi:10.1016/j.orggeochem.2008.07.009

Elshahed, MS, Youssef, NH, Luo, Q, Najar, FZ, Roe, BA, Sisk, TM, Bühring, S, Hinrichs, KU and Krumholz, LR (2007) Phylogenetic and Metabolic Diversity of Planctomycetes from Anaerobic, Sulfide- and Sulfur-Rich Zodletone Spring, Oklahoma. Applied and Environmental Microbiology, 73(15). 4707-4716. doi:10.1128/AEM.00591-07

Hinrichs, KU, Hayes, JM, Bach, W, Spivack, AJ, Holm, NG, Hmelo, LR, Johnson, GC and Sylva, SP (2006) Biological formation of ethane and propane in the deep marine subsurface. Proceedings of the National Academy of Sciences, USA, 103. 14684-14689. doi:10.1073/pnas.0606545103

Biddle, JF, Lipp, JS, Lever, MA, Lloyd, K, Sorensen, KB, Anderson, R, Fredricks, HF, Elvert, M, Kelly, TJ, Schrag, DP, Sogin, ML, Brenchley, JE, Teske, AP, House, CH and Hinrichs, KU (2006) Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru. Proceedings of the National Academy of Sciences, 103(10). 3846-3851. doi:10.1073/pnas.0600035103

Birgel, D, Thiel, V, Hinrichs, KU, Elvert, M, Campbell, KA, Reitner, J, Farmer, JD and Peckmann, JL (2006) Lipid biomarker patterns of methane-seep microbialites from the Mesozoic convergent margin of California. Organic Geochemistry, 37(10). 1289-1302. doi:10.1016/j.orggeochem.2006.02.004

Heuer, VB, Elvert, M, Tille, S, Prieto-Mollar, X, Hmelo, LR, Krummen, M and Hinrichs, KU (2006) Online d13C analysis of volatile fatty acids in sediment/porewater systems by liquid chromatography-isotope ratio-mass spectrometry. Limnology and Oceanography-Methods, 4. 346-357. doi/10.4319/lom.2006.4.346

Bice, KL, Birgel, D, Meyers, PA, Dahl, KA, Hinrichs, KU and Norris, RD (2006) A multiple proxy and modeling study of Cretaceous upper ocean temperatures and atmospheric CO2 concentrations. Paleoceanography, 21. PA2002. doi:10.1029/2005PA001203 PANGAEA Supplementary Data

d'Hondt, SL, Jørgensen, BB, Miller, JL, Batzke, A, Blake, DR, Cragg, BA, Cypionka, H, Dickens, GR, Ferdelman, TG, Hinrichs, KU, Holm, NG, Mitterer, RM, Spivack, AJ, Wang, G, Bekins, BA, Engelen, B, Ford, K, Gettemy, G, Rutherford, SD, Sass, H, Skilbeck, CG, Aiello, IW, Guerin, G, House, CH, Meister, P, Nähr, TH, Niitsuma, S, Parkes, J, Schippers, A, Smith, DC, Teske, AP, Wiegel, J, Padilla, CN and Acosta, JLS (2004) Distributions of microbial activities in deep subseafloor sediments. Science, 306(5705). 2216-2221. doi:10.1126/science.1101155

Orphan, VJ, Ussler, WIII, Nähr, TH, House, CH, Hinrichs, KU and Paull, CK (2004) Geological, geochemical, and microbiological heterogeneity of the seafloor around methane vents in the Eel River Basin, offshore California. Chemical Geology, 205(3-4). 265-289. doi:10.1016/j.chemgeo.2003.12.035

Sturt, HF, Summons, RE, Smith, KJ, Elvert, M and Hinrichs, KU (2004) Intact polar membrane lipids in prokaryotes and sediments deciphered by ESI-HPLC-MSn - new biomarkers for biogeochemistry and microbial ecology. Rapid Communications in Mass Spectrometry, 18. 617-628. doi:10.1002/rcm.1378

Hinrichs, KU, Hmelo, LR and Sylva, SP (2003) Molecular fossil record of elevated methane levels in Late Pleistocene coastal waters. Science, 299(5610). 1214-1217. doi:10.1126/science.1079601

Book Section

Fredricks, HF and Hinrichs, KU (2007) Data Report: Intact membrane lipis as indicators of subsurface life in Cretaceous and Paleogene sediments from Sites 1257 and 1258. In: Mosher, DC, Erbacher, J and Malone, MJ (eds.) Proceedings of the Ocean Drilling Program, Scientific Results. College Station, TX (Ocean Drilling Program), 1-11. doi:10.2973/odp.proc.sr.207.112.2007 PANGAEA Supplementary Data

Spivack, AJ, McNeil, C, Holm, NG and Hinrichs, KU (2006) Determination of in situ methane based on analysis of void gas. In: Jørgensen, BB, d'Hondt, SL and Miller, DJ (eds.) Proceedings of the Ocean Drilling Program. Scientific Results, 201. College Station, TX (Ocean Drilling Program), 1-11. doi:10.2973/odp.proc.sr.201.119.2006 PANGAEA Supplementary Data

This list was generated on Tue Sep 28 03:12:10 2021 CEST.